the available resources, but there are many jobs to run.
However, "canu" jobs typically require very large resources so "Slurm"
is used to queue them up for execution. The problem I encountered was
that the saved Slurm queue state was stale after an upgrade, resulting
in a
where Github
> instances put my picture on it, I would probably need a couple of life
> times. ;-P
>
> > > BTW, should we take the message that it makes sense to suggest
> > > slurm-client for canu from your observation?
> >
> > No, because "canu" works w
y picture on it, I would probably need a couple of life
times. ;-P
> > BTW, should we take the message that it makes sense to suggest
> > slurm-client for canu from your observation?
>
> No, because "canu" works without "Slurm":
Yes, it works without slu
Am Wed, Nov 01, 2023 at 10:02:24AM + schrieb Tony Travis:
> I didn't say that you gave advice "to use bioconda": I said that I had
> followed your advice 'about installing "canu" under "bioconda3"'.
>
> I needed to fix the problem we encountered w
On 01/11/2023 06:28, Andreas Tille wrote:
[...]
@Andreas, I've now removed the "canu" package and followed your advice about
installing "canu" under "bioconda3":
I *never ever* gave any advise to use bioconda.
https://salsa.debian.org/med-team/canu
Hi, A
Hi Tony,
Am Tue, Oct 31, 2023 at 11:13:13AM + schrieb Tony Travis:
> What's the status of "canu"?
Since canu has a test suite issue on arm64 a bug was filed[1].
Since we have no idea about this issue the forwarded the problem
upstream[2].
> The "canu" pac
Hi,
What's the status of "canu"?
The "canu" package in Debian-Med appears to be broken under Ubuntu 22.04
and I see that it has been marked for removal in Nov 2023:
https://tracker.debian.org/pkg/canu
@Andreas, I've now removed the "canu" package and followed
7 matches
Mail list logo
