Re: python-pysam version lagging

2015-06-20 Thread Afif Elghraoui
Hi, Charles, On الخميس 18 حزيران 2015 18:36, Charles Plessy wrote: I uploaded the package, thanks for preparing this update ! Thanks for uploading. A couple others also contributed to this update; I just finished it off. :) regards Afif -- Afif Elghraoui | عفيف الغراوي

Re: python-pysam version lagging

2015-06-18 Thread Charles Plessy
Hi Afif, I uploaded the package, thanks for preparing this update ! I attached here the build logs in case they may be useful. Have a nice day, Charles -- Charles Plessy Debian Med packaging team, http://www.debian.org/devel/debian-med Tsurumi, Kanagawa, Japan

Re: python-pysam version lagging

2015-06-17 Thread Afif Elghraoui
Hi, Charles, On الإثنين 15 حزيران 2015 14:57, Charles Plessy wrote: Hi Afif, thanks for the heads-up. I just updated samtools to version 1.2. Oh, thank you for doing that. Now there should be nothing to worry about for compatibility. I will try to have a look at python-pysam this week,

Re: python-pysam version lagging

2015-06-09 Thread Charles Plessy
Le Tue, Jun 09, 2015 at 12:38:31AM -0700, Afif Elghraoui a écrit : I was able to build it and clean it up a little more, but the package still has some lint: Hi Afif, thanks a lot for all this work. W: python-pysam source: dep5-copyright-license-name-not-unique (paragraph at line 40)

Re: python-pysam version lagging

2015-06-09 Thread Ghislain Vaillant
Hi guys, just a few additional comments 2015-06-09 9:14 GMT+01:00 Charles Plessy ple...@debian.org: Le Tue, Jun 09, 2015 at 12:38:31AM -0700, Afif Elghraoui a écrit : I was able to build it and clean it up a little more, but the package still has some lint: Hi Afif, thanks a lot for

python-pysam version lagging

2015-06-07 Thread Afif Elghraoui
Hi, team, A package I'm working on in Debian Med (python-pbcore) has pysam v0.8.1 as a run-time dependency, but the version in Debian is stuck at 0.7.7 from stable up through unstable. The latest upstream release looks like 0.8.3. I don't want to step on anyone's toes, but if nobody who

Re: python-pysam version lagging

2015-06-07 Thread Andreas Tille
Hi Afif, On Sun, Jun 07, 2015 at 12:07:16PM -0700, Afif Elghraoui wrote: Hi, team, A package I'm working on in Debian Med (python-pbcore) has pysam v0.8.1 as a run-time dependency, but the version in Debian is stuck at 0.7.7 from stable up through unstable. The latest upstream release looks