Your message dated Wed, 25 Mar 2020 02:11:56 +
with message-id
and subject line Bug#915829: fixed in arcp 0.2.1-1
has caused the Debian Bug report #915829,
regarding ITP: arcp -- (Archive and Package) URI parser and generator
to be marked as done.
This means that you claim that the problem
Hi folks,
I'm **REALLY** waiting for input which of our packages are
COVID-19 relevant. Where should we put our focus on?
Are bugs in macs more relevant than other packages and who
is willing to fix those bugs?
Thanks a lot for any input
Andreas.
PS: For two packages I uploaded
Dear Andreas,
All the packages related to X-ray chest and CT-scan radiology in
clinical setups can be considered as relevant to COVID-19 [1]. DICOM
viewers (2D + MPR) and DICOM servers that work out-of-the-box are
probably useful.
Among others, this includes the packages from the "orthanc"
Dear Sébastien,
On Tue, Mar 24, 2020 at 07:40:48AM +0100, Sébastien Jodogne wrote:
> Dear Andreas,
>
> All the packages related to X-ray chest and CT-scan radiology in clinical
> setups can be considered as relevant to COVID-19 [1]. DICOM viewers (2D +
> MPR) and DICOM servers that work
EDFbrowser 1.73 is available at:
https://www.teuniz.net/edfbrowser/
Kind Regards,
Teunis van Beelen
Hi Ben,
On Mon, Mar 23, 2020 at 11:09:04PM +0100, Ben Tris wrote:
> I am bussy making a list, but I want to let know this.
>
> Fastqc is on the debian med package list
> (https://tracker.debian.org/pkg/fastqc)
Well, regarding existing tools: Just name them. If you want to simplify
your work it
Hi Teunis,
thanks for the ping - just uploaded.
I have two questions:
1. Would you consider edfbrowser COVID-19 relevant?
2. Could you provide a test suite we could run?
Kind regards
Andreas.
On Tue, Mar 24, 2020 at 08:20:11AM +, Teunis van Beelen wrote:
> EDFbrowser 1.73 is
‐‐‐ Original Message ‐‐‐
On Tuesday, March 24, 2020 10:04 AM, Andreas Tille wrote:
> Hi Teunis,
>
> thanks for the ping - just uploaded.
You'r welcome.
>
> I have two questions:
>
> 1. Would you consider edfbrowser COVID-19 relevant?
No. At least not directly.
> 2. Could you
Dear Debian Community,
There will be an virtual (online) COVID-19 Biohackathon from April 5-11,
2020 and the Debian Med team invite you help us improve biomedical FOSS
and the tools/libraries that support those projects.
Most tasks do not require any knowledge of biology or medicine, and all
Hi Tony,
On 23.03.20 17:04, Tony Travis wrote:
On 23/03/2020 14:38, Steffen Möller wrote:
Dear all,
With the enormous difficulties to get bcbio into our distribution (a
considderable list of sequential dependencies for nim, java libraries,
golang-bio, sigh) I also had an eye on nf-core
Hi Steffen,
thanks a lot for your clarification.
Can we expect a list of links pointing to packages that are needed?
As I wrote in my other mail ftpmaster seems to be motivated. Currently
its us who need to deliver.
Kind regards
Andreas.
On Tue, Mar 24, 2020 at 03:37:22PM +0100,
On 24/03/2020 14:37, Steffen Möller wrote:
[...]
"please only use Conda as a last resort"
;) You read something else elsewhere.
Hi, Steffen.
No, I read it here:
https://github.com/nf-core/covid19#quick-start
Quick Start
i. Install nextflow
ii. Install either Docker or Singularity for
I have put up a list with recent updated Debian Med packages.
Also inviting to update or add entries to the Free Software Directory.
https://www.gezapig.nl/debianmedcovid.html
Debian Meds r-cran-surveillance relates to predicting outbreaks? .
May be interesting:
Hi Andreas,
Wrt package lists I know you need this for the blends structure. I don't
have these lists, What I have is a small list of lists:
https://github.com/nanoporetech/ - the nanopore is a prime tool for
covid-19
https://github.com/nf-core
I am not sure about the amont of energy I want to
Hi Ben,
On 24.03.20 22:51, Ben Tris wrote:
I have put up a list with recent updated Debian Med packages.
Also inviting to update or add entries to the Free Software Directory.
https://www.gezapig.nl/debianmedcovid.html
Debian Meds r-cran-surveillance relates to predicting outbreaks? .
I
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