Re: Why is blasr's testing migration still stalled? RC bugs are all fixed

2015-12-20 Thread Charles Plessy
Le Sun, Dec 20, 2015 at 07:26:44PM -0800, Afif Elghraoui a écrit : > > blasr had two RC bugs, both of which are fixed, but the testing > migration is held up and it looks like the reason is "updating blasr > introduces new bugs" [1]. Those two bugs are fixed and tagged as such > with the version

Why is blasr's testing migration still stalled? RC bugs are all fixed

2015-12-20 Thread Afif Elghraoui
Hi, all, blasr had two RC bugs, both of which are fixed, but the testing migration is held up and it looks like the reason is "updating blasr introduces new bugs" [1]. Those two bugs are fixed and tagged as such with the version currently in unstable. I don't really know any other way to indicate

Re: transitions and binnmu

2015-12-20 Thread Gert Wollny
Hi Andreas, > I'd suggest we migrate all our packages manually to be sure. Well, for insighttoolkit4 I request a binnmu, this build occupies the computer for 12+ hours, the others in debian-med I'll do manually. > Please let me know if you need more upload permissions. For now this would

Bug#808495: ITP: roary -- high speed stand alone pan genome pipeline

2015-12-20 Thread Sascha Steinbiss
Package: wnpp Severity: wishlist Owner: Sascha Steinbiss * Package name: roary Version : 3.5.7 Upstream Author : Andrew J. Page * URL : http://sanger-pathogens.github.io/Roary/ * License : GPL-3+ Programming Lang:

Re: r-cran-ape and plink1.9 ready for upload

2015-12-20 Thread Andreas Tille
On Sun, Dec 20, 2015 at 03:19:23PM +0100, Dylan wrote: > I updated r-cran-ape (3.4-1) and plink1.9 (.90~b3.28-151216-1) > packages, could someone upload them? Uploaded, thanks for your preparation Andreas. -- http://fam-tille.de

Re: transitions and binnmu

2015-12-20 Thread Andreas Tille
Hi Gert, On Sun, Dec 20, 2015 at 02:09:26PM +0100, Gert Wollny wrote: > > > Please let me know if you need more upload permissions. > > For now this would be aeskulap. Upload permission granted. > plastimatch and itksnap must wait for the insighttoolkit4 build. Just ping me if I should do

r-cran-ape and plink1.9 ready for upload

2015-12-20 Thread Dylan
Hi all, I updated r-cran-ape (3.4-1) and plink1.9 (.90~b3.28-151216-1) packages, could someone upload them? Thanks Best regards, Dylan

Re: transitions and binnmu

2015-12-20 Thread Gert Wollny
On Sun, 2015-12-20 at 14:17 +0100, Karsten Hilbert wrote: > > For now this would be aeskulap. > > Yay, hands up !! Actually, I just saw that packages like amide and aeskulap were already build against the latest dcmtk. https://release.debian.org/transitions/html/auto-dcmtk.html So it seems

Re: transitions and binnmu

2015-12-20 Thread Karsten Hilbert
On Sun, Dec 20, 2015 at 04:07:40PM +0100, Gert Wollny wrote: > Actually, I just saw that packages like amide and aeskulap were already > build against the latest dcmtk. > > https://release.debian.org/transitions/html/auto-dcmtk.html Ah, right, excellent. For what it is worth, I would consider

Re: transitions and binnmu

2015-12-20 Thread Gert Wollny
On Sun, 2015-12-20 at 16:31 +0100, Karsten Hilbert wrote: > On Sun, Dec 20, 2015 at 04:07:40PM +0100, Gert Wollny wrote: > > > Actually, I just saw that packages like amide and aeskulap were > > already > > build against the latest dcmtk. > > > >

Re: transitions and binnmu

2015-12-20 Thread Karsten Hilbert
On Sun, Dec 20, 2015 at 04:52:18PM +0100, Gert Wollny wrote: > > On Sun, Dec 20, 2015 at 04:07:40PM +0100, Gert Wollny wrote: > > > > > Actually, I just saw that packages like amide and aeskulap were > > > already > > > build against the latest dcmtk. > > > > > >