Build time test for recent commit of kineticstools

2018-10-28 Thread Andreas Tille
Hi Afif, I have updated the packaging of kineticstool after using git mode in d/watch. Unfortunately the build-time test runs into an error: ... test_private_api (test_inputs.TestSplitDataset) ... SKIP: Missing test data directory Test for known modifications near the start of H. pylori genome

Re: Any clue how to run Qiime2 test suite?

2018-10-28 Thread Andreas Tille
On Sun, Oct 28, 2018 at 02:58:59PM +0100, Liubov Chuprikova wrote: > > > > > * run build-time tests after "dh_auto_install" > > > > This was easy for me to propose but when I tried to implement the tests > like this, it didn't work :-P The egg was installed but still unavailable > for

Re: Any clue how to run Qiime2 test suite?

2018-10-28 Thread Liubov Chuprikova
Hi Andreas, On Sun, 21 Oct 2018 at 00:10 Andreas Tille wrote: > On Sat, Oct 20, 2018 at 05:40:44PM +0200, Liubov Chuprikova wrote: > > > > the required "testing plugin" (dummy-plugin) is defined as an > > entry point argument in setup.py. Qiime uses pkg_resources module to find > > the plugin >

Please update fis-gtm package

2018-10-28 Thread Andreas Tille
Hi Amul, when updating all Vcs fields of Debian Med packages to salsa I update fis-gtm. I noticed that you had injected a changelog entry for V6.3-004 but now V6.3-005 is up to date. You did not yet answered my question about the continuous name change of the binary package (or I forgot your

Automatically imported latest fw4spl version - please adapt patches and review packaging

2018-10-28 Thread Andreas Tille
Hi Flavien, in my attempt to upgrade Vcs fields of Debian Med packages I was running my automatic upgrade script on the fw4spl git repository[1]. I did not continued the packaging since the patches do not apply to the new version. Could you please have a look and upgrade the packaging? Kind

Re: Changes in latest version of biomaj3 - please review

2018-10-28 Thread Andreas Tille
On Thu, Oct 25, 2018 at 01:29:31PM +0200, Olivier Sallou wrote: > > be recommended by > > > > med-bio(the applications) > > > > med-bio-dev (developers oriented packages) > > > > Currently python3-biomaj3 is recommended by med-bio which might be > > no sensible choice. > > should