Hi,
as you can see here
https://github.com/dkoboldt/varscan/issues/12
four years ago upstream did not agree to a DFSG free license. It turned
out in the past that asking again (with better arguments) can change
upstreams opinion. I would be happy if somebody else would try to approach
Hi,
according to the arm64 log[1] the autopkgtest of jellyfish fails with
tests/generate_sequence.sh: 6: /usr/lib/jellyfish/bin/generate_sequence:
Exec format error
I was running the test on my pinebook without any problem. Any idea
what "Exec format error" might mean?
Kind regards
Hi Steve, Hi Gert,
I suppose targeting experimental at first makes sense. I have
not spent that much time interacting with ITK, and may be a bit
short on spare cycles in the coming week, so don't believe I
have that much to add. :)
I remember we've agreed on the upstream "withdata" notation
Hi Maarten,
Maarten L. Hekkelman, on 2020-11-16 08:24:36 +0100:
> Op 14-11-2020 om 16:12 schreef Étienne Mollier:
> > On the other hand, thanks for providing an autopkgtest!
> > autopkgtests are cool!:)
>
> H... now that the first autopkgtest run has failed, since when does
> build-essential
Hi,
On 16-11-2020 16:58, Andreas Tille wrote:>> This is on ARM, and tests on
amd64 are OK... could this just be a RAM>> issue on the test box? I very
vaguely remember that kmc needs quite a>> bit of RAM, which I'm not sure
all of the ARM CI boxes have?>> Just guessing.
Our arm64 hosts have about
On Mon, Nov 16, 2020 at 09:53:05PM +0530, Nilesh Patra wrote:
> > > This is on ARM, and tests on amd64 are OK... could this just be a RAM
> > > issue on the test box? I very vaguely remember that kmc needs quite a
> > > bit of RAM, which I'm not sure all of the ARM CI boxes have?
> > > Just
On Mon, 16 Nov 2020 at 21:28, Andreas Tille wrote:
> Hi Sascha,
>
> On Mon, Nov 16, 2020 at 04:19:23PM +0100, Sascha Steinbiss wrote:
> > Hi,
> >
> > > run_kmc.sh: line 2: 5046 Segmentation fault kmc -fa -m4 -k95
> -sf1 -ci25 -cs100 -cx100
>
On Mon, Nov 16, 2020 at 07:51:29PM +0530, Nilesh Patra wrote:
> dcut dm --uid npatra...@gmail.com --allow neobio
Done, thanks, Andreas.
--
http://fam-tille.de
Hi Sascha,
On Mon, Nov 16, 2020 at 04:19:23PM +0100, Sascha Steinbiss wrote:
> Hi,
>
> > run_kmc.sh: line 2: 5046 Segmentation fault kmc -fa -m4 -k95 -sf1
> > -ci25 -cs100 -cx100
> > /tmp/tmp.GkQzyocbDU/test/iva.out/tmp.common_kmers.8oo5afnl/reads.fa kmc_out
> > $PWD > /dev/null
Hi,
> run_kmc.sh: line 2: 5046 Segmentation fault kmc -fa -m4 -k95 -sf1 -ci25
> -cs100 -cx100
> /tmp/tmp.GkQzyocbDU/test/iva.out/tmp.common_kmers.8oo5afnl/reads.fa kmc_out
> $PWD > /dev/null
[...]
> There are more Segmentation faults in connection with kmc later.
> I think a
On Monday, November 16, 2020 5:49:09 A.M. CST Gert Wollny wrote:
> > My thought is to upload to experimental first. I don't see any
> > "experimental" branch in salsa, but maybe I can just create one? Or
> > would it be better to make an itk5 branch?
>
> I'd suggest to use a new project
Hi folks,
I stumbled upon the autopkgtests log of iva[1] which possibly uncovers
an issue in kmc since the log says:
...
The following command failed with exit code 1
/usr/bin/iva --threads 1 --trimmomatic /usr/share/java/trimmomatic.jar
--pcr_primers hiv_pcr_primers.fa -f reads_1.fq.gz -r
dcut dm --uid npatra...@gmail.com --allow neobio
Hi,
several European countries are back to lockdown again. May be this
might give some more people a motivation to join our effort.
The video conferences of the Debian Med team are an established
means to continue the COVID-19 hackathon in April[1] and we do
it twice per month on every
2th
On Mon, Nov 16, 2020 at 05:19:15PM +0530, Nilesh Patra wrote:
> dcut dm --uid npatra...@gmail.com --allow alter-sequence-alignment
Done, thanks, Andreas.
--
http://fam-tille.de
dcut dm --uid npatra...@gmail.com --allow alter-sequence-alignment
Hello Steve,
thanks for looking into this.
Am Sonntag, den 15.11.2020, 13:07 -0600 schrieb Steven Robbins:
> Hi,
>
> I have a bit of time today and thought I'd look into packaging ITK
> 5.1.1.
>
> My thought is to upload to experimental first. I don't see any
> "experimental" branch in
Op 14-11-2020 om 16:12 schreef Étienne Mollier:
On the other hand, thanks for providing an autopkgtest!
autopkgtests are cool!:)
H... now that the first autopkgtest run has failed, since when does
build-essential not install g++?
Since I see in the log file:
make: g++: No such file or
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