Re: Please finalise new version of ncbi-blast+ since build system is quite tricky

2016-04-12 Thread Aaron M. Ucko
olivier sallou writes: > Regarding build itself , I have cloned the git repo and started a build (it > is long). But the moment, everything looks fine. Great! Please let me know if you need me to take a look at anything. Incidentally, there was never a "build" directory in the source tree,

Re: Help needed for "gbp:error: upstream/2.3.0 is not a valid treeish" (Was: Please finalise new version of ncbi-blast+ since build system is quite tricky)

2016-04-12 Thread Gert Wollny
Hello,  Am Dienstag, den 12.04.2016, 17:42 +0200 schrieb Andreas Tille: > Hi Olivier, > > On Tue, Apr 12, 2016 at 03:33:43PM +, olivier sallou wrote: > > > > > > > > I imported the new upstream version and I **hope** I refreshed > > > the quilt > > > patches correctly.  However, even the bu

Re: Please finalise new version of ncbi-blast+ since build system is quite tricky

2016-04-12 Thread olivier sallou
Le mar. 12 avr. 2016 à 16:16, Andreas Tille a écrit : > Hi Aaron and Olivier, > > since there is a new upstream version since some time I tried my luck to > upgrade the Debian packaging. I took the chance to migrate it to Git[1] > since I'm hoping that some GSoC student might provide an autopkgt

Re: Help needed for "gbp:error: upstream/2.3.0 is not a valid treeish" (Was: Please finalise new version of ncbi-blast+ since build system is quite tricky)

2016-04-12 Thread olivier sallou
Le mar. 12 avr. 2016 à 17:42, Andreas Tille a écrit : > Hi Olivier, > > On Tue, Apr 12, 2016 at 03:33:43PM +, olivier sallou wrote: > > > I imported the new upstream version and I **hope** I refreshed the > quilt > > > patches correctly. However, even the build system has changed a bit - > >

Help needed for "gbp:error: upstream/2.3.0 is not a valid treeish" (Was: Please finalise new version of ncbi-blast+ since build system is quite tricky)

2016-04-12 Thread Andreas Tille
Hi Olivier, On Tue, Apr 12, 2016 at 03:33:43PM +, olivier sallou wrote: > > I imported the new upstream version and I **hope** I refreshed the quilt > > patches correctly. However, even the build system has changed a bit - > > for instance c++/src/build was moved to c++/src/build-system. For

Re: Please finalise new version of ncbi-blast+ since build system is quite tricky

2016-04-12 Thread olivier sallou
Le mar. 12 avr. 2016 à 16:16, Andreas Tille a écrit : > Hi Aaron and Olivier, > > since there is a new upstream version since some time I tried my luck to > upgrade the Debian packaging. I took the chance to migrate it to Git[1] > since I'm hoping that some GSoC student might provide an autopkgt

Please finalise new version of ncbi-blast+ since build system is quite tricky

2016-04-12 Thread Andreas Tille
Hi Aaron and Olivier, since there is a new upstream version since some time I tried my luck to upgrade the Debian packaging. I took the chance to migrate it to Git[1] since I'm hoping that some GSoC student might provide an autopkgtest for the package and the candidates all asked for packages mai