Re: pyBigWig

2016-12-02 Thread Diane Trout
> I am not quite sure what you mean by "organizing the source tree", > since  > you are supposed to have the unpacked sources from the upstream > tarball,  > plus an additional debian/ folder containing the Debian specific > files  > (control, copyright, rules...). This is common to all packaging

Re: pyBigWig

2016-12-02 Thread Ghislain Vaillant
, and the latter usually recommends to follow the Python packaging recommendations. In the end, where the package (pyBigWig) is hosted becomes a matter of choice for the maintainer (yourself) and the decision is often based on which team is likely to be more able to assist with looking after

Re: pyBigWig

2016-12-02 Thread Diane Trout
> I don't think this is a problem. Policy 4.13 [1] says > > ~~~ > Debian packages should not make use of these convenience copies > unless > the included package is explicitly intended to be used in this way. > ~~~ > > which I think matches the situation here. Thank you for point that clause

Re: pyBigWig

2016-12-01 Thread Afif Elghraoui
Hello, على الخميس 1 كانون الأول 2016 ‫16:32، كتب Diane Trout: > And instead of building a shared library, they just add the C files to > the python C extension. See: > https://github.com/dpryan79/pyBigWig/blob/master/setup.py#L14 > > I believe this is a violation of Debian p

pyBigWig

2016-12-01 Thread Diane Trout
Hi, We needed to use pyBigWig for some of our processing. https://pypi.python.org/pypi/pyBigWig/0.3.2 or https://github.com/dpryan79/pyBigWig Being able to read bigBed or bigWig and to be able to directly write bigwig files seemed useful to us. The package is MIT/Expat licensed I made