[med-svn] [r-bioc-geneplotter] branch master updated (0bfe35f -> e4e3497)

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[med-svn] [r-bioc-geneplotter] 01/01: copy most builddeps to package deps

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[med-svn] [r-bioc-deseq2] annotated tag upstream/1.10.1 created (now ee0ba14)

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[med-svn] [r-bioc-deseq2] annotated tag upstream/1.12.3 created (now 48c16ca)

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[med-svn] [r-cran-pscbs] 02/03: Add missing license paragraph

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[med-svn] [r-cran-pscbs] 01/03: Add Build-Depends also as Depends

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[med-svn] [r-cran-pscbs] branch master updated (954792e -> 6c51259)

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[med-svn] [r-cran-pscbs] 03/03: Upload to unstable

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[med-svn] r22247 - trunk/packages/R/r-cran-adegenet/trunk/debian

Author: tille Date: 2016-06-28 16:33:48 + (Tue, 28 Jun 2016) New Revision: 22247 Modified: trunk/packages/R/r-cran-adegenet/trunk/debian/copyright Log: Clarify license Modified: trunk/packages/R/r-cran-adegenet/trunk/debian/copyright

[med-svn] [r-bioc-deseq2] branch upstream created (now 16b20a8)

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[med-svn] [r-bioc-deseq2] 04/05: Merge tag 'upstream/1.12.3'

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[med-svn] [r-bioc-deseq2] branch pristine-tar created (now cbf974f)

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[med-svn] [r-bioc-deseq2] 05/05: update to latest release, add autopkgtest

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[med-svn] [r-bioc-deseq2] 02/02: pristine-tar data for r-bioc-deseq2_1.12.3.orig.tar.gz

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[med-svn] [r-bioc-deseq2] 01/02: pristine-tar data for r-bioc-deseq2_1.10.1.orig.tar.gz

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[med-svn] [r-bioc-deseq2] 02/05: initial Debianization

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[med-svn] [r-bioc-deseq2] branch master created (now 32d189c)

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[med-svn] r22246 - trunk/packages/R/r-cran-htmlwidgets/trunk/debian

Author: tille Date: 2016-06-28 15:25:46 + (Tue, 28 Jun 2016) New Revision: 22246 Modified: trunk/packages/R/r-cran-htmlwidgets/trunk/debian/changelog Log: Upload to unstable (new) Modified: trunk/packages/R/r-cran-htmlwidgets/trunk/debian/changelog

[med-svn] r22245 - trunk/packages/R/r-cran-fields/trunk/debian

Author: tille Date: 2016-06-28 15:19:41 + (Tue, 28 Jun 2016) New Revision: 22245 Modified: trunk/packages/R/r-cran-fields/trunk/debian/changelog Log: Upload to unstable (new) Modified: trunk/packages/R/r-cran-fields/trunk/debian/changelog

[med-svn] r22244 - trunk/packages/R/r-cran-distory/trunk/debian

Author: tille Date: 2016-06-28 15:19:04 + (Tue, 28 Jun 2016) New Revision: 22244 Modified: trunk/packages/R/r-cran-distory/trunk/debian/changelog Log: UPload to unstable (new) Modified: trunk/packages/R/r-cran-distory/trunk/debian/changelog

[med-svn] r22243 - trunk/packages/R/r-cran-matrixstats/trunk/debian

Author: tille Date: 2016-06-28 15:07:33 + (Tue, 28 Jun 2016) New Revision: 22243 Modified: trunk/packages/R/r-cran-matrixstats/trunk/debian/control Log: Fix Vcs-Browser Modified: trunk/packages/R/r-cran-matrixstats/trunk/debian/control

[med-svn] r22242 - trunk/packages/R/r-cran-doparallel/tags

Author: tille Date: 2016-06-28 15:06:18 + (Tue, 28 Jun 2016) New Revision: 22242 Added: trunk/packages/R/r-cran-doparallel/tags/1.0.10-3/ Removed: trunk/packages/R/r-cran-doparallel/tags/1.0.8-1/ Log: Tagged 1.0.10-3 ___ debian-med-commit

[med-svn] r22241 - in trunk/packages/R: . r-cran-htmlwidgets r-cran-htmlwidgets/trunk r-cran-htmlwidgets/trunk/debian r-cran-htmlwidgets/trunk/debian/source

Author: tille Date: 2016-06-28 15:05:57 + (Tue, 28 Jun 2016) New Revision: 22241 Added: trunk/packages/R/r-cran-htmlwidgets/ trunk/packages/R/r-cran-htmlwidgets/trunk/ trunk/packages/R/r-cran-htmlwidgets/trunk/debian/ trunk/packages/R/r-cran-htmlwidgets/trunk/debian/changelog

[med-svn] r22240 - trunk/packages/R/r-cran-treescape/trunk/debian

Author: tille Date: 2016-06-28 15:00:57 + (Tue, 28 Jun 2016) New Revision: 22240 Modified: trunk/packages/R/r-cran-treescape/trunk/debian/changelog Log: Update todo list Modified: trunk/packages/R/r-cran-treescape/trunk/debian/changelog

[med-svn] r22239 - in trunk/packages/R: . r-cran-distory r-cran-distory/trunk r-cran-distory/trunk/debian r-cran-distory/trunk/debian/source

Author: tille Date: 2016-06-28 14:56:34 + (Tue, 28 Jun 2016) New Revision: 22239 Added: trunk/packages/R/r-cran-distory/ trunk/packages/R/r-cran-distory/trunk/ trunk/packages/R/r-cran-distory/trunk/debian/ trunk/packages/R/r-cran-distory/trunk/debian/changelog

[med-svn] r22238 - in trunk/packages/R: . r-cran-fields r-cran-fields/trunk r-cran-fields/trunk/debian r-cran-fields/trunk/debian/source r-cran-fields/trunk/debian/tests

Author: tille Date: 2016-06-28 14:55:24 + (Tue, 28 Jun 2016) New Revision: 22238 Added: trunk/packages/R/r-cran-fields/ trunk/packages/R/r-cran-fields/trunk/ trunk/packages/R/r-cran-fields/trunk/debian/ trunk/packages/R/r-cran-fields/trunk/debian/README.test

[med-svn] [ariba] 01/01: suggest sspace

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[med-svn] [ariba] annotated tag upstream/1.0.1 created (now 33dee3f)

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[med-svn] [ariba] branch upstream updated (194d86c -> 74d1bf9)

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[med-svn] [libquazip] 02/02: Merge tag 'upstream/0.7.2'

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[med-svn] [libquazip] branch pristine-tar updated (b462357 -> 7cda3d1)

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[med-svn] [libquazip] 01/01: pristine-tar data for libquazip_0.7.2.orig.tar.gz

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[med-svn] [libquazip] branch master updated (3867913 -> d43e6dc)

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[med-svn] [libquazip] branch upstream updated (4160904 -> 8f80fe7)

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[med-svn] [libquazip] 01/02: Imported Upstream version 0.7.2

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[med-svn] [ariba] branch with_sspace created (now e874c7c)

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[med-svn] [ariba] 02/04: Merge tag 'upstream/1.0.1'

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[med-svn] [ariba] 03/04: bump Debian version

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[med-svn] [ariba] branch master updated (9d6d5f2 -> 4e9ef27)

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[med-svn] [ariba] 01/04: Imported Upstream version 1.0.1

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[med-svn] [ariba] branch pristine-tar updated (71abb95 -> 6406d82)

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[med-svn] [ariba] 01/01: pristine-tar data for ariba_1.0.1.orig.tar.gz

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[med-svn] [orthanc-dicomweb] 01/01: pristine-tar data for orthanc-dicomweb_0.3+dfsg.orig.tar.xz

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[med-svn] [orthanc-dicomweb] 04/05: building 0.3+dfsg-1

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[med-svn] [orthanc-dicomweb] branch master updated (f869f80 -> 5b8603e)

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[med-svn] [orthanc-dicomweb] 03/05: Merge tag 'upstream/0.3+dfsg'

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[med-svn] [orthanc-dicomweb] branch pristine-tar updated (657cadd -> 8756fd8)

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[med-svn] [orthanc-dicomweb] 05/05: fix lintian warning

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[med-svn] [orthanc-dicomweb] branch upstream updated (9813e4a -> fc6ba12)

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[med-svn] [orthanc-dicomweb] 01/05: preparing for 0.3+dfsg-1

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[med-svn] r22235 - in trunk/packages/orthanc-webviewer/trunk/debian: . patches

Author: jodogne-guest Date: 2016-06-28 13:59:22 + (Tue, 28 Jun 2016) New Revision: 22235 Modified: trunk/packages/orthanc-webviewer/trunk/debian/changelog trunk/packages/orthanc-webviewer/trunk/debian/control trunk/packages/orthanc-webviewer/trunk/debian/patches/cmake

[med-svn] [libdisorder] 05/06: DEP3 headers

This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository libdisorder. commit 3915dd3ebf54d92f61c63e20f608e5b7bd795c0f Author: Andreas Tille Date: Tue Jun 28 08:57:23 2016 +0200 DEP3 headers ---

[med-svn] r22237 - trunk/packages/R/r-cran-treescape/trunk/debian

Author: tille Date: 2016-06-28 14:01:36 + (Tue, 28 Jun 2016) New Revision: 22237 Modified: trunk/packages/R/r-cran-treescape/trunk/debian/changelog trunk/packages/R/r-cran-treescape/trunk/debian/control Log: New upstream version, recheck dependencies Modified:

[med-svn] r22236 - trunk/packages/R/r-cran-treescape/trunk/debian

Author: tille Date: 2016-06-28 14:01:00 + (Tue, 28 Jun 2016) New Revision: 22236 Modified: trunk/packages/R/r-cran-treescape/trunk/debian/copyright Log: Add license paragraph Modified: trunk/packages/R/r-cran-treescape/trunk/debian/copyright

[med-svn] [libdisorder] 02/06: Add manpage for usage example

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[med-svn] [libdisorder] 03/06: Add ITP number

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[med-svn] [libdisorder] 04/06: More verbose description.

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[med-svn] [libdisorder] 01/06: Multi-Arch: same

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[med-svn] [libdisorder] branch master updated (b34c7ba -> d92b2bc)

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[med-svn] r22234 - trunk/packages/R/r-cran-adegenet/trunk/debian

Author: tille Date: 2016-06-28 13:34:09 + (Tue, 28 Jun 2016) New Revision: 22234 Modified: trunk/packages/R/r-cran-adegenet/trunk/debian/changelog Log: Upload to unstable (new) Modified: trunk/packages/R/r-cran-adegenet/trunk/debian/changelog

[med-svn] r22233 - trunk/packages/R/r-cran-adegenet/trunk/debian

Author: tille Date: 2016-06-28 13:16:25 + (Tue, 28 Jun 2016) New Revision: 22233 Added: trunk/packages/R/r-cran-adegenet/trunk/debian/README.source Modified: trunk/packages/R/r-cran-adegenet/trunk/debian/README.test Log: Document binary data files Added:

[med-svn] r22232 - trunk/packages/R/r-cran-adegenet/trunk/debian

Author: tille Date: 2016-06-28 12:55:02 + (Tue, 28 Jun 2016) New Revision: 22232 Modified: trunk/packages/R/r-cran-adegenet/trunk/debian/changelog trunk/packages/R/r-cran-adegenet/trunk/debian/control trunk/packages/R/r-cran-adegenet/trunk/debian/rules Log: Finally r-cran-spdep was

[med-svn] r22231 - trunk/packages/R/r-cran-locfit/trunk

Author: tille Date: 2016-06-28 09:27:16 + (Tue, 28 Jun 2016) New Revision: 22231 Added: trunk/packages/R/r-cran-locfit/trunk/README.status Log: Document the fact that packaging happens in Git Added: trunk/packages/R/r-cran-locfit/trunk/README.status

[med-svn] r22230 - trunk/packages/R/r-cran-locfit/trunk/debian

Author: tille Date: 2016-06-28 09:25:38 + (Tue, 28 Jun 2016) New Revision: 22230 Removed: trunk/packages/R/r-cran-locfit/trunk/debian/README.test trunk/packages/R/r-cran-locfit/trunk/debian/changelog trunk/packages/R/r-cran-locfit/trunk/debian/compat

[med-svn] [r-cran-locfit] 03/03: d/watch points to r-project.org - so should d/copyright

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[med-svn] [r-cran-locfit] 01/03: cran is default - no need to specify

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[med-svn] [r-cran-locfit] 02/03: Add Upstream-Contact (as per SVN)

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[med-svn] [r-cran-locfit] branch master updated (eec8be1 -> 3f559c8)

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[med-svn] [r-cran-locfit] branch master updated (9743821 -> eec8be1)

This is an automated email from the git hooks/post-receive script. tille pushed a change to branch master in repository r-cran-locfit. from 9743821 add summary of licensing issue new aac5d49 Take over some pieces from description in SVN new 0680845 Add missing '#'

[med-svn] [r-cran-locfit] 03/04: I'd volunteer to co-maintain (as per SVN status)

This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository r-cran-locfit. commit 2a80ee5aa64bb48cc901fed66c54ee6db86e7754 Author: Andreas Tille Date: Tue Jun 28 11:14:58 2016 +0200 I'd volunteer to co-maintain

[med-svn] [r-cran-locfit] 04/04: Take over copyright information from SVN

This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository r-cran-locfit. commit eec8be15e6e235447a423000b16ba62c5ce03543 Author: Andreas Tille Date: Tue Jun 28 11:18:12 2016 +0200 Take over copyright

[med-svn] [r-cran-locfit] 02/04: Add missing '#' sign

This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository r-cran-locfit. commit 0680845fec6cb79990452b37f8e89caab7b17abf Author: Andreas Tille Date: Tue Jun 28 11:14:26 2016 +0200 Add missing '#' sign ---

[med-svn] [r-cran-locfit] 01/04: Take over some pieces from description in SVN

This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository r-cran-locfit. commit aac5d49bd0845645addc44ca5477dbbbd5475b4c Author: Andreas Tille Date: Tue Jun 28 11:13:59 2016 +0200 Take over some pieces from

[med-svn] [spades] 01/01: stop using embedded libssw, , libhat-trie and libnlopt

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[med-svn] [beast-mcmc] 01/01: Drop packaging tools from upstream source, add missing copyright

This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository beast-mcmc. commit 337371efe951d7b65a926aeb802399c4d572b586 Author: Andreas Tille Date: Tue Jun 28 10:47:41 2016 +0200 Drop packaging tools from

[med-svn] [augustus] branch master updated (90b602c -> 2af108c)

This is an automated email from the git hooks/post-receive script. satta pushed a change to branch master in repository augustus. from 90b602c releasing package augustus version 3.2.2+dfsg-1 new 2af108c fix manpage option The 1 revisions listed above as "new" are entirely new

[med-svn] [augustus] 01/01: fix manpage option

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[med-svn] [beast-mcmc] tag debian/1.8.4+dfsg-1 created (now edb1ba5)

This is an automated email from the git hooks/post-receive script. tille pushed a change to tag debian/1.8.4+dfsg-1 in repository beast-mcmc. at edb1ba5 (commit) No new revisions were added by this update. -- Alioth's /usr/local/bin/git-commit-notice on

[med-svn] [beast-mcmc] branch master updated (69ceacf -> edb1ba5)

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[med-svn] [beast-mcmc] branch pristine-tar updated (0ee3b09 -> 9f3d404)

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[med-svn] [beast-mcmc] 01/01: pristine-tar data for beast-mcmc_1.8.4+dfsg.orig.tar.xz

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[med-svn] [beast-mcmc] 02/05: Merge tag 'upstream/1.8.4+dfsg'

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[med-svn] [beast-mcmc] 05/05: Upload to unstable (main)

This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository beast-mcmc. commit edb1ba59a5e52539594e39309af6060f6df7e003 Author: Andreas Tille Date: Tue Jun 28 10:01:05 2016 +0200 Upload to unstable (main) ---

[med-svn] [beast-mcmc] 03/05: New upstream version

This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository beast-mcmc. commit 8a181eecfe6d3798ad30b4fe229bbda4a179aa97 Author: Andreas Tille Date: Tue Jun 28 09:26:02 2016 +0200 New upstream version ---

[med-svn] [r-bioc-cummerbund] 01/03: Imported Upstream version 2.14.0

This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository r-bioc-cummerbund. commit a29b49cf5f1d9c67d183f746c28dcf6764a5581f Author: Andreas Tille Date: Tue Jun 28 09:24:19 2016 +0200 Imported Upstream

[med-svn] [r-bioc-cummerbund] 02/03: Merge tag 'upstream/2.14.0'

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[med-svn] [r-bioc-cummerbund] 03/03: New upstream version

This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository r-bioc-cummerbund. commit 0526e881c621280d543eeb3c28fcba4262d53eef Author: Andreas Tille Date: Tue Jun 28 09:24:50 2016 +0200 New upstream version ---

[med-svn] [r-bioc-cummerbund] branch upstream updated (1498ad5 -> a29b49c)

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[med-svn] [r-bioc-cummerbund] 01/01: pristine-tar data for r-bioc-cummerbund_2.14.0.orig.tar.gz

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[med-svn] [r-bioc-cummerbund] branch master updated (3d85e45 -> 0526e88)

This is an automated email from the git hooks/post-receive script. tille pushed a change to branch master in repository r-bioc-cummerbund. from 3d85e45 Alternate patch for vignettes allowing post-install building new a29b49c Imported Upstream version 2.14.0 new

[med-svn] [r-bioc-cummerbund] branch pristine-tar updated (8d0b4fb -> f98ae89)

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[med-svn] [primer3] tag debian/2.3.7-2 created (now d112948)

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[med-svn] [primer3] 01/01: Add missing copyright

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[med-svn] [libdisorder] branch master updated (4bf37f5 -> b34c7ba)

This is an automated email from the git hooks/post-receive script. tille pushed a change to branch master in repository libdisorder. from 4bf37f5 Handle large inputs correctly. new b34c7ba Add test (Thanks again to Christian Seiler ) The 1 revisions

[med-svn] [libdisorder] 01/01: Add test (Thanks again to Christian Seiler <christ...@iwakd.de>)

This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository libdisorder. commit b34c7ba20df779f860034d200fa766bb5c8996de Author: Andreas Tille Date: Tue Jun 28 08:26:35 2016 +0200 Add test (Thanks again to