[med-svn] r22462 - trunk/packages/sofa-framework/trunk/debian

2016-07-08 Thread Gert Wollny
Author: gert-guest Date: 2016-07-08 20:55:14 + (Fri, 08 Jul 2016) New Revision: 22462 Modified: trunk/packages/sofa-framework/trunk/debian/changelog Log: Correct chanlog entry Modified: trunk/packages/sofa-framework/trunk/debian/changelog

[med-svn] r22461 - trunk/packages/sofa-framework/trunk/debian

2016-07-08 Thread Gert Wollny
Author: gert-guest Date: 2016-07-08 20:54:43 + (Fri, 08 Jul 2016) New Revision: 22461 Modified: trunk/packages/sofa-framework/trunk/debian/changelog trunk/packages/sofa-framework/trunk/debian/control trunk/packages/sofa-framework/trunk/debian/copyright Log: more cleanups

[med-svn] r22460 - in trunk/packages/sofa-framework/trunk/debian: . patches

2016-07-08 Thread Gert Wollny
Author: gert-guest Date: 2016-07-08 20:42:50 + (Fri, 08 Jul 2016) New Revision: 22460 Modified: trunk/packages/sofa-framework/trunk/debian/copyright trunk/packages/sofa-framework/trunk/debian/patches/hardening.patch Log: d/copyright: DEP5 corrections Modified:

[med-svn] r22459 - trunk/packages/sofa-framework/trunk/debian

2016-07-08 Thread Gert Wollny
Author: gert-guest Date: 2016-07-08 20:14:05 + (Fri, 08 Jul 2016) New Revision: 22459 Modified: trunk/packages/sofa-framework/trunk/debian/changelog trunk/packages/sofa-framework/trunk/debian/rules Log: Enable parallel builds Modified:

[med-svn] r22458 - trunk/packages/rostlab/profphd/trunk/debian

2016-07-08 Thread Tatiana Malygina
Author: latticetower-guest Date: 2016-07-08 19:50:04 + (Fri, 08 Jul 2016) New Revision: 22458 Modified: trunk/packages/rostlab/profphd/trunk/debian/changelog trunk/packages/rostlab/profphd/trunk/debian/rules Log: add hardening in d/rules Modified:

[med-svn] r22457 - trunk/packages/rostlab/profphd/trunk/debian

2016-07-08 Thread Tatiana Malygina
Author: latticetower-guest Date: 2016-07-08 19:49:04 + (Fri, 08 Jul 2016) New Revision: 22457 Modified: trunk/packages/rostlab/profphd/trunk/debian/changelog trunk/packages/rostlab/profphd/trunk/debian/copyright Log: cme fix dpkg-copyright Modified:

[med-svn] r22456 - trunk/packages/rostlab/profphd/trunk/debian

2016-07-08 Thread Tatiana Malygina
Author: latticetower-guest Date: 2016-07-08 19:47:37 + (Fri, 08 Jul 2016) New Revision: 22456 Modified: trunk/packages/rostlab/profphd/trunk/debian/changelog trunk/packages/rostlab/profphd/trunk/debian/control Log: cme fix dpkg-control Modified:

[med-svn] r22455 - trunk/packages/rostlab/predictprotein/trunk/debian

2016-07-08 Thread Tatiana Malygina
Author: latticetower-guest Date: 2016-07-08 19:19:18 + (Fri, 08 Jul 2016) New Revision: 22455 Modified: trunk/packages/rostlab/predictprotein/trunk/debian/changelog trunk/packages/rostlab/predictprotein/trunk/debian/rules Log: add hardening Modified:

[med-svn] r22454 - trunk/packages/rostlab/predictprotein/trunk/debian

2016-07-08 Thread Tatiana Malygina
Author: latticetower-guest Date: 2016-07-08 19:18:27 + (Fri, 08 Jul 2016) New Revision: 22454 Modified: trunk/packages/rostlab/predictprotein/trunk/debian/changelog trunk/packages/rostlab/predictprotein/trunk/debian/control Log: cme fix dpkg-control Modified:

[med-svn] r22453 - in trunk/packages/sofa-framework/trunk/debian: . patches

2016-07-08 Thread Gert Wollny
Author: gert-guest Date: 2016-07-08 17:33:52 + (Fri, 08 Jul 2016) New Revision: 22453 Added: trunk/packages/sofa-framework/trunk/debian/patches/hardening.patch Modified: trunk/packages/sofa-framework/trunk/debian/changelog trunk/packages/sofa-framework/trunk/debian/copyright

[med-svn] [odil] branch pristine-tar updated (4b63421 -> 0dfa442)

2016-07-08 Thread Julien Lamy
This is an automated email from the git hooks/post-receive script. lamy-guest pushed a change to branch pristine-tar in repository odil. from 4b63421 pristine-tar data for odil_0.7.0.orig.tar.gz new 0dfa442 pristine-tar data for odil_0.7.1.orig.tar.gz The 1 revisions listed

[med-svn] [odil] branch upstream updated (63a8725 -> ff5fc36)

2016-07-08 Thread Julien Lamy
This is an automated email from the git hooks/post-receive script. lamy-guest pushed a change to branch upstream in repository odil. from 63a8725 Imported Upstream version 0.7.0 new ff5fc36 Imported Upstream version 0.7.1 The 1 revisions listed above as "new" are entirely new

[med-svn] [odil] 03/04: Remove patch applied upstream

2016-07-08 Thread Julien Lamy
This is an automated email from the git hooks/post-receive script. lamy-guest pushed a commit to branch master in repository odil. commit 82fd01c8093c20e1c1a7045bc71dccab979eda34 Author: Julien Lamy Date: Fri Jul 8 18:06:30 2016 +0200 Remove patch applied upstream ---

[med-svn] [odil] 01/01: pristine-tar data for odil_0.7.1.orig.tar.gz

2016-07-08 Thread Julien Lamy
This is an automated email from the git hooks/post-receive script. lamy-guest pushed a commit to branch pristine-tar in repository odil. commit 0dfa4429ae8d5f3e54019bee3e6d6545c1ef95cc Author: Julien Lamy Date: Fri Jul 8 17:50:07 2016 +0200 pristine-tar data for

[med-svn] [odil] branch master updated (1b0a6fe -> 73d67c5)

2016-07-08 Thread Julien Lamy
This is an automated email from the git hooks/post-receive script. lamy-guest pushed a change to branch master in repository odil. from 1b0a6fe Fix tests when building i386 new ff5fc36 Imported Upstream version 0.7.1 new 6c67d4e Merge tag 'upstream/0.7.1' new

[med-svn] [odil] 02/04: Merge tag 'upstream/0.7.1'

2016-07-08 Thread Julien Lamy
This is an automated email from the git hooks/post-receive script. lamy-guest pushed a commit to branch master in repository odil. commit 6c67d4ed421be935311d8850732bda3678b5b842 Merge: 1b0a6fe ff5fc36 Author: Julien Lamy Date: Fri Jul 8 17:50:07 2016 +0200 Merge tag

[med-svn] [odil] 01/04: Imported Upstream version 0.7.1

2016-07-08 Thread Julien Lamy
This is an automated email from the git hooks/post-receive script. lamy-guest pushed a commit to branch master in repository odil. commit ff5fc36d0ba8c992e08d2bc9583dd2790bf5bc28 Author: Julien Lamy Date: Fri Jul 8 17:50:06 2016 +0200 Imported Upstream version 0.7.1 ---

[med-svn] [pbgenomicconsensus] 07/08: Adjust test suite for new release

2016-07-08 Thread Afif Elghraoui
This is an automated email from the git hooks/post-receive script. afif pushed a commit to branch master in repository pbgenomicconsensus. commit c73735bd6cd622889932565e1f3491dd83693708 Author: Afif Elghraoui Date: Fri Jul 8 08:58:46 2016 -0700 Adjust test suite for new

[med-svn] [pbgenomicconsensus] annotated tag debian/2.0.0+20160420-1 created (now a9357be)

2016-07-08 Thread Afif Elghraoui
This is an automated email from the git hooks/post-receive script. afif pushed a change to annotated tag debian/2.0.0+20160420-1 in repository pbgenomicconsensus. at a9357be (tag) tagging da0ebb40fadac37f36e9661b685b24b6c764ac6c (commit) replaces debian/1.0.0-1 tagged by Afif

[med-svn] [pbgenomicconsensus] 05/08: Install new examples

2016-07-08 Thread Afif Elghraoui
This is an automated email from the git hooks/post-receive script. afif pushed a commit to branch master in repository pbgenomicconsensus. commit 800ae4d062931b0dc60f87223afa6b2b820681c8 Author: Afif Elghraoui Date: Fri Jul 8 08:23:10 2016 -0700 Install new examples ---

[med-svn] [pbgenomicconsensus] branch master updated (8134406 -> da0ebb4)

2016-07-08 Thread Afif Elghraoui
This is an automated email from the git hooks/post-receive script. afif pushed a change to branch master in repository pbgenomicconsensus. from 8134406 Set up new revision new 007e49e Install the python scripts at build time rather than patching setup.py new 5e74442

[med-svn] [pbgenomicconsensus] 08/08: releasing package pbgenomicconsensus version 2.0.0+20160420-1

2016-07-08 Thread Afif Elghraoui
This is an automated email from the git hooks/post-receive script. afif pushed a commit to branch master in repository pbgenomicconsensus. commit da0ebb40fadac37f36e9661b685b24b6c764ac6c Author: Afif Elghraoui Date: Fri Jul 8 09:01:00 2016 -0700 releasing package

[med-svn] [pbgenomicconsensus] 02/08: Redo and reorganize manpages

2016-07-08 Thread Afif Elghraoui
This is an automated email from the git hooks/post-receive script. afif pushed a commit to branch master in repository pbgenomicconsensus. commit 5e744427abd554ff0ebf50310f91835a6212d83f Author: Afif Elghraoui Date: Fri Jul 8 08:17:43 2016 -0700 Redo and reorganize

[med-svn] [pbgenomicconsensus] 01/08: Install the python scripts at build time rather than patching setup.py

2016-07-08 Thread Afif Elghraoui
This is an automated email from the git hooks/post-receive script. afif pushed a commit to branch master in repository pbgenomicconsensus. commit 007e49e07ab6ea63fcb14b9f43a206e0d4824aa1 Author: Afif Elghraoui Date: Fri Jul 8 06:15:09 2016 -0700 Install the python

[med-svn] r22452 - trunk/packages/sofa-framework/trunk/debian

2016-07-08 Thread Gert Wollny
Author: gert-guest Date: 2016-07-08 16:00:58 + (Fri, 08 Jul 2016) New Revision: 22452 Modified: trunk/packages/sofa-framework/trunk/debian/changelog trunk/packages/sofa-framework/trunk/debian/control Log: cme fix dpkg-control, and update changelog Modified:

[med-svn] r22450 - trunk/packages/rostlab/profphd-utils/trunk/debian

2016-07-08 Thread Tatiana Malygina
Author: latticetower-guest Date: 2016-07-08 15:50:23 + (Fri, 08 Jul 2016) New Revision: 22450 Modified: trunk/packages/rostlab/profphd-utils/trunk/debian/changelog trunk/packages/rostlab/profphd-utils/trunk/debian/rules Log: add hardening Modified:

[med-svn] r22451 - trunk/packages/sofa-framework/trunk/debian/patches

2016-07-08 Thread Gert Wollny
Author: gert-guest Date: 2016-07-08 15:55:08 + (Fri, 08 Jul 2016) New Revision: 22451 Added: trunk/packages/sofa-framework/trunk/debian/patches/gcc-6.patch Modified: trunk/packages/sofa-framework/trunk/debian/patches/series Log: Add gcc-6 patch, Closes: #811747 Added:

[med-svn] r22449 - trunk/packages/rostlab/profphd-utils/trunk/debian

2016-07-08 Thread Tatiana Malygina
Author: latticetower-guest Date: 2016-07-08 15:48:41 + (Fri, 08 Jul 2016) New Revision: 22449 Modified: trunk/packages/rostlab/profphd-utils/trunk/debian/changelog trunk/packages/rostlab/profphd-utils/trunk/debian/control Log: cme fix dpkg-control Modified:

[med-svn] r22447 - trunk/packages/rostlab/profphd-utils/trunk/debian

2016-07-08 Thread Tatiana Malygina
Author: latticetower-guest Date: 2016-07-08 15:20:55 + (Fri, 08 Jul 2016) New Revision: 22447 Added: trunk/packages/rostlab/profphd-utils/trunk/debian/docs Log: add debian/docs Added: trunk/packages/rostlab/profphd-utils/trunk/debian/docs

[med-svn] r22446 - trunk/packages/rostlab/profphd-utils/trunk/debian

2016-07-08 Thread Tatiana Malygina
Author: latticetower-guest Date: 2016-07-08 15:19:38 + (Fri, 08 Jul 2016) New Revision: 22446 Modified: trunk/packages/rostlab/profphd-utils/trunk/debian/changelog trunk/packages/rostlab/profphd-utils/trunk/debian/copyright Log: add files in debian/examples/ to debian/copyright, run cme

[med-svn] [orthanc] branch master updated (77ae71d -> 8d9cbc2)

2016-07-08 Thread Sebastien Jodogne
This is an automated email from the git hooks/post-receive script. jodogne-guest pushed a change to branch master in repository orthanc. from 77ae71d Orthanc 1.1.0 dropped support for Google Log new 8d9cbc2 preparing for 1.1.0+dfsg-2 The 1 revisions listed above as "new" are

[med-svn] r22443 - in trunk/packages/rostlab/profphd-utils/trunk/debian: . examples

2016-07-08 Thread Tatiana Malygina
Author: latticetower-guest Date: 2016-07-08 14:05:22 + (Fri, 08 Jul 2016) New Revision: 22443 Added: trunk/packages/rostlab/profphd-utils/trunk/debian/examples/ trunk/packages/rostlab/profphd-utils/trunk/debian/examples/1ppt.hssp

[med-svn] [orthanc] 01/01: preparing for 1.1.0+dfsg-2

2016-07-08 Thread Sebastien Jodogne
This is an automated email from the git hooks/post-receive script. jodogne-guest pushed a commit to branch master in repository orthanc. commit 8d9cbc2f8b4c8d6395ad59cee45ba92adf39b447 Author: jodogne-guest Date: Fri Jul 8 15:43:42 2016 +0200 preparing for

[med-svn] r22442 - trunk/packages/macsyfinder/trunk/debian

2016-07-08 Thread Andreas Tille
Author: tille Date: 2016-07-08 12:10:08 + (Fri, 08 Jul 2016) New Revision: 22442 Modified: trunk/packages/macsyfinder/trunk/debian/changelog Log: Upload to unstable Modified: trunk/packages/macsyfinder/trunk/debian/changelog

[med-svn] r22441 - trunk/packages/R/r-cran-treescape/trunk/debian

2016-07-08 Thread Andreas Tille
Author: tille Date: 2016-07-08 12:08:01 + (Fri, 08 Jul 2016) New Revision: 22441 Modified: trunk/packages/R/r-cran-treescape/trunk/debian/changelog Log: UPload to new Modified: trunk/packages/R/r-cran-treescape/trunk/debian/changelog

[med-svn] r22440 - trunk/packages/macsyfinder/trunk/debian

2016-07-08 Thread Andreas Tille
Author: tille Date: 2016-07-08 11:13:33 + (Fri, 08 Jul 2016) New Revision: 22440 Modified: trunk/packages/macsyfinder/trunk/debian/changelog trunk/packages/macsyfinder/trunk/debian/copyright Log: DEP5 fix Modified: trunk/packages/macsyfinder/trunk/debian/changelog

[med-svn] r22439 - trunk/packages/macsyfinder/trunk/debian

2016-07-08 Thread Andreas Tille
Author: tille Date: 2016-07-08 11:12:08 + (Fri, 08 Jul 2016) New Revision: 22439 Modified: trunk/packages/macsyfinder/trunk/debian/changelog trunk/packages/macsyfinder/trunk/debian/macsyfinder.1 Log: Fix manpage Modified: trunk/packages/macsyfinder/trunk/debian/changelog

[med-svn] r22438 - trunk/packages/macsyfinder/trunk/debian

2016-07-08 Thread Andreas Tille
Author: tille Date: 2016-07-08 11:01:44 + (Fri, 08 Jul 2016) New Revision: 22438 Modified: trunk/packages/macsyfinder/trunk/debian/changelog trunk/packages/macsyfinder/trunk/debian/control Log: Add missing Build-Depends texlive-generic-extra Modified:

[med-svn] r22437 - trunk/packages/R/r-cran-treescape/trunk/debian

2016-07-08 Thread Andreas Tille
Author: tille Date: 2016-07-08 11:00:05 + (Fri, 08 Jul 2016) New Revision: 22437 Added: trunk/packages/R/r-cran-treescape/trunk/debian/README.source Log: Explain binary data files Added: trunk/packages/R/r-cran-treescape/trunk/debian/README.source

[med-svn] r22436 - trunk/packages/R/r-cran-treescape/trunk/debian/tests

2016-07-08 Thread Andreas Tille
Author: tille Date: 2016-07-08 10:52:08 + (Fri, 08 Jul 2016) New Revision: 22436 Modified: trunk/packages/R/r-cran-treescape/trunk/debian/tests/run-unit-test Log: Fix test Modified: trunk/packages/R/r-cran-treescape/trunk/debian/tests/run-unit-test

[med-svn] r22435 - trunk/packages/R/r-cran-treescape/trunk/debian

2016-07-08 Thread Andreas Tille
Author: tille Date: 2016-07-08 10:48:06 + (Fri, 08 Jul 2016) New Revision: 22435 Modified: trunk/packages/R/r-cran-treescape/trunk/debian/changelog trunk/packages/R/r-cran-treescape/trunk/debian/control Log: Fix Depends Modified:

[med-svn] r22434 - trunk/packages/macsyfinder/trunk/debian

2016-07-08 Thread Andreas Tille
Author: tille Date: 2016-07-08 10:27:17 + (Fri, 08 Jul 2016) New Revision: 22434 Modified: trunk/packages/macsyfinder/trunk/debian/changelog trunk/packages/macsyfinder/trunk/debian/control Log: cme fix dpkg-control Modified: trunk/packages/macsyfinder/trunk/debian/changelog

[med-svn] r22433 - trunk/packages/macsyfinder/trunk/debian

2016-07-08 Thread Andreas Tille
Author: tille Date: 2016-07-08 10:25:35 + (Fri, 08 Jul 2016) New Revision: 22433 Modified: trunk/packages/macsyfinder/trunk/debian/changelog Log: Fix citation syntax and add some more information Modified: trunk/packages/macsyfinder/trunk/debian/changelog

[med-svn] [r-cran-phangorn] annotated tag upstream/2.0.4 created (now 8285413)

2016-07-08 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to annotated tag upstream/2.0.4 in repository r-cran-phangorn. at 8285413 (tag) tagging fb6f81b79563278edc3399ec8a747caca4e28a60 (commit) replaces upstream/1.99.14 tagged by Andreas Tille

[med-svn] [r-cran-phangorn] tag debian/2.0.4-1 created (now a174223)

2016-07-08 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to tag debian/2.0.4-1 in repository r-cran-phangorn. at a174223 (commit) No new revisions were added by this update. -- Alioth's /usr/local/bin/git-commit-notice on

[med-svn] [r-cran-phangorn] branch master updated (462d1a9 -> a174223)

2016-07-08 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch master in repository r-cran-phangorn. from 462d1a9 adjust versioned dependency from r-cran-igraph new 75fbbe0 Add autopkgtest new a174223 Upload to unstable The 2

[med-svn] [r-cran-phangorn] 01/02: Add autopkgtest

2016-07-08 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository r-cran-phangorn. commit 75fbbe098050a1763c4596d52cd905d4ca8dfe61 Author: Andreas Tille Date: Fri Jul 8 09:55:39 2016 +0200 Add autopkgtest ---

[med-svn] [r-cran-igraph] tag debian/1.0.1-1 created (now f5c658d)

2016-07-08 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to tag debian/1.0.1-1 in repository r-cran-igraph. at f5c658d (commit) No new revisions were added by this update. -- Alioth's /usr/local/bin/git-commit-notice on

[med-svn] [r-cran-igraph] 03/03: Remove unused paragrpah from copyright and upload to unstable

2016-07-08 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository r-cran-igraph. commit f5c658d891205725414cbea0d7413631a8883621 Author: Andreas Tille Date: Fri Jul 8 08:25:03 2016 +0200 Remove unused paragrpah from

[med-svn] [r-cran-igraph] branch master updated (fd101ff -> f5c658d)

2016-07-08 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch master in repository r-cran-igraph. from fd101ff Add missing (Build-)Depends: r-cran-magrittr new 0079244 Add missing (Build-)Depends new 453fa35 There is no news file

[med-svn] [r-cran-igraph] 01/03: Add missing (Build-)Depends

2016-07-08 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository r-cran-igraph. commit 00792448bb662e6adbd4d12feed7609bd3f67934 Author: Andreas Tille Date: Thu Jul 7 19:55:09 2016 +0200 Add missing (Build-)Depends