Andreas Tille pushed to branch master at Debian Med / reapr
Commits:
efab69cc by Andreas Tille at 2024-04-05T08:54:42+02:00
Drop hard-coded dependency on shared library. ${shlib:Depends} is working these
days
- - - - -
790959ed by Andreas Tille at 2024-04-05T08:55:17+02:00
routine-update: Standards-Version: 4.6.2
- - - - -
e84e210e by Andreas Tille at 2024-04-05T08:55:18+02:00
routine-update: debhelper-compat 13
- - - - -
42c9e55c by Andreas Tille at 2024-04-05T08:55:22+02:00
routine-update: Rules-Requires-Root: no
- - - - -
d067012a by Andreas Tille at 2024-04-05T06:55:23+00:00
Update renamed lintian tag names in lintian overrides.
Changes-By: lintian-brush
Fixes: lintian: renamed-tag
See-also: https://lintian.debian.org/tags/renamed-tag.html
- - - - -
1463e8c2 by Andreas Tille at 2024-04-05T08:55:48+02:00
routine-update: watch file standard 4
- - - - -
8a0effed by Andreas Tille at 2024-04-05T08:58:51+02:00
routine-update: Ready to upload to unstable
- - - - -
4 changed files:
- debian/changelog
- debian/control
- debian/source/lintian-overrides
- debian/watch
Changes:
=====================================
debian/changelog
=====================================
@@ -1,3 +1,21 @@
+reapr (1.0.18+dfsg-6) unstable; urgency=medium
+
+ * Team upload.
+
+ [ Matthias Klose ]
+ * Drop hard-coded dependency on shared library. ${shlib:Depends} is
+ working these days.
+ Closes: #1068432
+
+ [ Andreas Tille ]
+ * Standards-Version: 4.6.2 (routine-update)
+ * debhelper-compat 13 (routine-update)
+ * Rules-Requires-Root: no (routine-update)
+ Update renamed lintian tag names in lintian overrides.
+ * watch file standard 4 (routine-update)
+
+ -- Andreas Tille <ti...@debian.org> Fri, 05 Apr 2024 08:55:49 +0200
+
reapr (1.0.18+dfsg-5) unstable; urgency=medium
* Team upload.
=====================================
debian/control
=====================================
@@ -3,35 +3,35 @@ Maintainer: Debian Med Packaging Team
<debian-med-packaging@lists.alioth.debian.
Uploaders: Sascha Steinbiss <sa...@debian.org>
Section: science
Priority: optional
-Build-Depends: debhelper-compat (= 12),
+Build-Depends: debhelper-compat (= 13),
libbamtools-dev,
libtabixpp-dev,
- libhts-dev (>= 1.3),
+ libhts-dev,
zlib1g-dev,
asciidoctor,
- samtools (>= 1.3),
+ samtools,
bamtools,
smalt,
r-base,
snpomatic,
tabix,
libfile-copy-link-perl
-Standards-Version: 4.4.0
+Standards-Version: 4.6.2
Vcs-Browser: https://salsa.debian.org/med-team/reapr
Vcs-Git: https://salsa.debian.org/med-team/reapr.git
Homepage: https://www.sanger.ac.uk/science/tools/reapr
+Rules-Requires-Root: no
Package: reapr
Architecture: any
Depends: ${shlibs:Depends},
${misc:Depends},
- samtools (>= 1.3),
+ samtools,
bamtools,
smalt,
r-base,
snpomatic,
tabix,
- libtabixpp0,
libfile-copy-link-perl
Description: universal tool for genome assembly evaluation
REAPR is a tool that evaluates the accuracy of a genome assembly using mapped
=====================================
debian/source/lintian-overrides
=====================================
@@ -1,2 +1,2 @@
# Upstream does not provide signed tarballs
-reapr source: debian-watch-does-not-check-gpg-signature
+reapr source: debian-watch-does-not-check-openpgp-signature
=====================================
debian/watch
=====================================
@@ -1,3 +1,3 @@
-version=3
+version=4
opts=pasv,repacksuffix=+dfsg,dversionmangle=s/\+(debian|dfsg|ds|deb)(\.\d+)?$//
\
ftp://ftp.sanger.ac.uk/pub/resources/software/reapr/Reapr_([0-9.]+)\.tar\.gz
View it on GitLab:
https://salsa.debian.org/med-team/reapr/-/compare/2ee630a76ae3b5990202d8edc61740a931944971...8a0effede2ecdcb8afcf1ffd8482c6b43763257b
--
View it on GitLab:
https://salsa.debian.org/med-team/reapr/-/compare/2ee630a76ae3b5990202d8edc61740a931944971...8a0effede2ecdcb8afcf1ffd8482c6b43763257b
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