[med-svn] r17191 - in trunk/packages/ginkgocadx/trunk/debian: . patches

2014-06-17 Thread Andreas Tille
Author: tille Date: 2014-06-17 06:18:53 + (Tue, 17 Jun 2014) New Revision: 17191 Modified: trunk/packages/ginkgocadx/trunk/debian/changelog trunk/packages/ginkgocadx/trunk/debian/copyright trunk/packages/ginkgocadx/trunk/debian/patches/fix-wx.patch

[med-svn] r17192 - trunk/packages/R/r-bioc-rsamtools/trunk/debian

2014-06-17 Thread Andreas Tille
Author: tille Date: 2014-06-17 06:43:05 + (Tue, 17 Jun 2014) New Revision: 17192 Removed: trunk/packages/R/r-bioc-rsamtools/trunk/debian/tests/ Modified: trunk/packages/R/r-bioc-rsamtools/trunk/debian/control Log: Revert latest change since r-bioc-pasillabamsubset is not (and will not

[med-svn] r17193 - trunk/packages/R/r-bioc-pasillabamsubset/trunk/debian

2014-06-17 Thread Andreas Tille
Author: tille Date: 2014-06-17 06:50:37 + (Tue, 17 Jun 2014) New Revision: 17193 Modified: trunk/packages/R/r-bioc-pasillabamsubset/trunk/debian/changelog Log: Update packaging Modified: trunk/packages/R/r-bioc-pasillabamsubset/trunk/debian/changelog

[med-svn] r17194 - trunk/packages/R/r-bioc-rsamtools/trunk/debian

2014-06-17 Thread Andreas Tille
Author: tille Date: 2014-06-17 06:55:51 + (Tue, 17 Jun 2014) New Revision: 17194 Modified: trunk/packages/R/r-bioc-rsamtools/trunk/debian/README.test trunk/packages/R/r-bioc-rsamtools/trunk/debian/changelog Log: More verbose information how to run the test suite Modified:

[med-svn] r17195 - trunk/packages/ginkgocadx/trunk/debian

2014-06-17 Thread Andreas Tille
Author: tille Date: 2014-06-17 07:01:33 + (Tue, 17 Jun 2014) New Revision: 17195 Modified: trunk/packages/ginkgocadx/trunk/debian/changelog trunk/packages/ginkgocadx/trunk/debian/control Log: Build-Depend: libwxgtk3.0-dev Modified: trunk/packages/ginkgocadx/trunk/debian/changelog

[med-svn] r17196 - trunk/packages/ginkgocadx/trunk/debian

2014-06-17 Thread Andreas Tille
Author: tille Date: 2014-06-17 07:09:59 + (Tue, 17 Jun 2014) New Revision: 17196 Modified: trunk/packages/ginkgocadx/trunk/debian/changelog Log: Add bug closing ... once the package might really build successfully (wrote problem report with building to the bug report) Modified:

[med-svn] r17197 - trunk/packages/R/r-bioc-rsamtools/trunk/debian

2014-06-17 Thread Andreas Tille
Author: tille Date: 2014-06-17 07:23:38 + (Tue, 17 Jun 2014) New Revision: 17197 Modified: trunk/packages/R/r-bioc-rsamtools/trunk/debian/changelog Log: TODO: test suite runs only in source tree and fails anyway, any help is really appreciated Modified:

[med-svn] r17198 - trunk/packages/R/r-bioc-qvalue/trunk/debian

2014-06-17 Thread Andreas Tille
Author: tille Date: 2014-06-17 07:36:20 + (Tue, 17 Jun 2014) New Revision: 17198 Modified: trunk/packages/R/r-bioc-qvalue/trunk/debian/changelog trunk/packages/R/r-bioc-qvalue/trunk/debian/compat trunk/packages/R/r-bioc-qvalue/trunk/debian/control Log: New upstream version; cme fix

[med-svn] r17199 - trunk/packages/R/r-bioc-qvalue/trunk/debian

2014-06-17 Thread Andreas Tille
Author: tille Date: 2014-06-17 07:43:07 + (Tue, 17 Jun 2014) New Revision: 17199 Removed: trunk/packages/R/r-bioc-qvalue/trunk/debian/get-orig-source Modified: trunk/packages/R/r-bioc-qvalue/trunk/debian/changelog trunk/packages/R/r-bioc-qvalue/trunk/debian/copyright

[med-svn] r17200 - trunk/packages/R/r-bioc-qvalue/trunk/debian

2014-06-17 Thread Andreas Tille
Author: tille Date: 2014-06-17 07:49:51 + (Tue, 17 Jun 2014) New Revision: 17200 Modified: trunk/packages/R/r-bioc-qvalue/trunk/debian/changelog Log: Upload to unstable Modified: trunk/packages/R/r-bioc-qvalue/trunk/debian/changelog

[med-svn] r17201 - trunk/packages/R/r-bioc-qvalue/tags

2014-06-17 Thread Andreas Tille
Author: tille Date: 2014-06-17 07:51:14 + (Tue, 17 Jun 2014) New Revision: 17201 Added: trunk/packages/R/r-bioc-qvalue/tags/1.38.0+dfsg-1/ Removed: trunk/packages/R/r-bioc-qvalue/tags/1.24.0-1/ Log: Tagged 1.38.0+dfsg-1 ___

[med-svn] r17202 - trunk/packages/R/r-bioc-hypergraph/trunk/debian

2014-06-17 Thread Andreas Tille
Author: tille Date: 2014-06-17 08:17:55 + (Tue, 17 Jun 2014) New Revision: 17202 Modified: trunk/packages/R/r-bioc-hypergraph/trunk/debian/changelog trunk/packages/R/r-bioc-hypergraph/trunk/debian/control Log: cme fix dpkg-control Modified:

[med-svn] r17203 - trunk/packages/R/r-bioc-hypergraph/tags

2014-06-17 Thread Andreas Tille
Author: tille Date: 2014-06-17 08:23:08 + (Tue, 17 Jun 2014) New Revision: 17203 Added: trunk/packages/R/r-bioc-hypergraph/tags/1.36.0-1/ Log: Tagged 1.36.0-1 ___ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org

[med-svn] [pyscanfcs] annotated tag upstream/0.2.2 created (now fa7b3e6)

2014-06-17 Thread Alex Mestiashvili
This is an automated email from the git hooks/post-receive script. malex-guest pushed a change to annotated tag upstream/0.2.2 in repository pyscanfcs. at fa7b3e6 (tag) tagging c9db3861670afc57461acfceb40de0f579794317 (commit) tagged by Alexandre Mestiashvili on Thu Jun

[med-svn] [pyscanfcs] 07/08: d/changelog: close ITP

2014-06-17 Thread Alex Mestiashvili
This is an automated email from the git hooks/post-receive script. malex-guest pushed a commit to branch master in repository pyscanfcs. commit 850f25f218ced2d4059e8df8566887687b5b6a8d Author: Alexandre Mestiashvili a...@biotec.tu-dresden.de Date: Tue Jun 17 09:56:42 2014 +0200

[med-svn] [pyscanfcs] 04/08: d/rules: build tex docs d/watch: watch for new versions d/control: texlive and librsvg2-bin dependencies

2014-06-17 Thread Alex Mestiashvili
This is an automated email from the git hooks/post-receive script. malex-guest pushed a commit to branch master in repository pyscanfcs. commit 1f48d05560343195e3ca88f6f8ce84eaea7ab4a1 Author: Alexandre Mestiashvili a...@biotec.tu-dresden.de Date: Thu Jun 12 11:10:16 2014 +0200 d/rules:

[med-svn] [pyscanfcs] 05/08: d/patches/fix_module_location.patch: use debian specific path d/patches/series d/pyscanfcs.desktop d/pyscanfcs.dirs d/pyscanfcs.install

2014-06-17 Thread Alex Mestiashvili
This is an automated email from the git hooks/post-receive script. malex-guest pushed a commit to branch master in repository pyscanfcs. commit b4c65af509e93c7ccec11647b234188090aa5a8a Author: Alexandre Mestiashvili a...@biotec.tu-dresden.de Date: Mon Jun 16 13:33:08 2014 +0200

[med-svn] [pyscanfcs] branch upstream created (now c9db386)

2014-06-17 Thread Alex Mestiashvili
This is an automated email from the git hooks/post-receive script. malex-guest pushed a change to branch upstream in repository pyscanfcs. at c9db386 Imported Upstream version 0.2.2 No new revisions were added by this update. -- Alioth's /usr/local/bin/git-commit-notice on

[med-svn] [pyscanfcs] 08/08: d/rules: fixe permissions for .pyx file d/control: fix short description d/README.Debian d/pyscanfcs.menu

2014-06-17 Thread Alex Mestiashvili
This is an automated email from the git hooks/post-receive script. malex-guest pushed a commit to branch master in repository pyscanfcs. commit 6f8d4a05f46d04bad9fa5a004055e67d47996043 Author: Alexandre Mestiashvili a...@biotec.tu-dresden.de Date: Tue Jun 17 10:24:03 2014 +0200 d/rules:

[med-svn] [pyscanfcs] 06/08: d/rules: chmod -R 644 examples/misc d/pyscanfcs.1: stub man page d/pyscanfcs.manpages: install d/pyscanfcs.1

2014-06-17 Thread Alex Mestiashvili
This is an automated email from the git hooks/post-receive script. malex-guest pushed a commit to branch master in repository pyscanfcs. commit cf2c6acf40a836acdc1801277a3fcc7c590f1a1a Author: Alexandre Mestiashvili a...@biotec.tu-dresden.de Date: Mon Jun 16 13:58:06 2014 +0200 d/rules:

[med-svn] [pyscanfcs] 03/08: d/control: add build dependencies

2014-06-17 Thread Alex Mestiashvili
This is an automated email from the git hooks/post-receive script. malex-guest pushed a commit to branch master in repository pyscanfcs. commit 3ef1cf9db48e1f0aacd9ad15d580f04fe66f6643 Author: Alexandre Mestiashvili a...@biotec.tu-dresden.de Date: Thu Jun 12 10:44:15 2014 +0200 d/control:

[med-svn] [pyscanfcs] 01/01: pristine-tar data for pyscanfcs_0.2.2.orig.tar.gz

2014-06-17 Thread Alex Mestiashvili
This is an automated email from the git hooks/post-receive script. malex-guest pushed a commit to branch pristine-tar in repository pyscanfcs. commit 8380920640875d6685344fb5eae7101ef79aee30 Author: Alexandre Mestiashvili a...@biotec.tu-dresden.de Date: Thu Jun 12 09:51:42 2014 +0200

[med-svn] [pyscanfcs] branch master created (now 6f8d4a0)

2014-06-17 Thread Alex Mestiashvili
This is an automated email from the git hooks/post-receive script. malex-guest pushed a change to branch master in repository pyscanfcs. at 6f8d4a0d/rules: fixe permissions for .pyx file d/control: fix short description d/README.Debian d/pyscanfcs.menu This branch includes the

[med-svn] [pyscanfcs] 02/08: inital debianization

2014-06-17 Thread Alex Mestiashvili
This is an automated email from the git hooks/post-receive script. malex-guest pushed a commit to branch master in repository pyscanfcs. commit ee93f5cccae21f32f36d6baadca6f2e32f3fc279 Author: Alexandre Mestiashvili a...@biotec.tu-dresden.de Date: Thu Jun 12 09:52:09 2014 +0200 inital

[med-svn] [pyscanfcs] branch pristine-tar created (now 8380920)

2014-06-17 Thread Alex Mestiashvili
This is an automated email from the git hooks/post-receive script. malex-guest pushed a change to branch pristine-tar in repository pyscanfcs. at 8380920 pristine-tar data for pyscanfcs_0.2.2.orig.tar.gz This branch includes the following new commits: new 8380920

[med-svn] [pyscanfcs] 03/03: d/changelog: upload to unstable

2014-06-17 Thread Alex Mestiashvili
This is an automated email from the git hooks/post-receive script. malex-guest pushed a commit to branch master in repository pyscanfcs. commit d57ae73a86565db0e7351f328d11df1fbcbcf1f7 Author: Alexandre Mestiashvili a...@biotec.tu-dresden.de Date: Tue Jun 17 15:58:59 2014 +0200

[med-svn] [pyscanfcs] branch master updated (6f8d4a0 - d57ae73)

2014-06-17 Thread Alex Mestiashvili
This is an automated email from the git hooks/post-receive script. malex-guest pushed a change to branch master in repository pyscanfcs. from 6f8d4a0d/rules: fixe permissions for .pyx file d/control: fix short description d/README.Debian d/pyscanfcs.menu new 50ae43e

[med-svn] [pyscanfcs] 01/03: d/rules: move docs to /usr/share/doc/ and use symlinks d/pyscanfcs.docs: install docs

2014-06-17 Thread Alex Mestiashvili
This is an automated email from the git hooks/post-receive script. malex-guest pushed a commit to branch master in repository pyscanfcs. commit 50ae43e47768b1b43d62eeb65e46f1e61fd55999 Author: Alexandre Mestiashvili a...@biotec.tu-dresden.de Date: Tue Jun 17 14:17:37 2014 +0200 d/rules:

[med-svn] [pyscanfcs] 02/03: d/rules: do not compress PDF file, as it is needed for GUI d/README.Debian: removed

2014-06-17 Thread Alex Mestiashvili
This is an automated email from the git hooks/post-receive script. malex-guest pushed a commit to branch master in repository pyscanfcs. commit e6be2c74ff8c99ad5c1dc1de139159661a643320 Author: Alexandre Mestiashvili a...@biotec.tu-dresden.de Date: Tue Jun 17 15:05:10 2014 +0200 d/rules:

[med-svn] [pyscanfcs] branch master updated (d57ae73 - 6c418d0)

2014-06-17 Thread Alex Mestiashvili
This is an automated email from the git hooks/post-receive script. malex-guest pushed a change to branch master in repository pyscanfcs. from d57ae73d/changelog: upload to unstable new 6c418d0d/compat: 9 The 1 revisions listed above as new are entirely new to this

[med-svn] [pyscanfcs] 01/01: d/compat: 9

2014-06-17 Thread Alex Mestiashvili
This is an automated email from the git hooks/post-receive script. malex-guest pushed a commit to branch master in repository pyscanfcs. commit 6c418d019bfac2f9b4e90f0a9df48c4aa6730bbf Author: Alexandre Mestiashvili a...@biotec.tu-dresden.de Date: Tue Jun 17 16:06:11 2014 +0200 d/compat:

[med-svn] [pyscanfcs] 01/01: d/control: bump debhelper's version

2014-06-17 Thread Alex Mestiashvili
This is an automated email from the git hooks/post-receive script. malex-guest pushed a commit to branch master in repository pyscanfcs. commit f7c8746881aeed383a557baedb5c3c070f20e28f Author: Alexandre Mestiashvili a...@biotec.tu-dresden.de Date: Tue Jun 17 19:58:10 2014 +0200

[med-svn] [pyscanfcs] branch master updated (6c418d0 - f7c8746)

2014-06-17 Thread Alex Mestiashvili
This is an automated email from the git hooks/post-receive script. malex-guest pushed a change to branch master in repository pyscanfcs. from 6c418d0d/compat: 9 new f7c8746d/control: bump debhelper's version The 1 revisions listed above as new are entirely new to this

[med-svn] [r-cran-scales] 02/06: Merge tag 'upstream/0.2.4'

2014-06-17 Thread Benjamin Eikel
This is an automated email from the git hooks/post-receive script. benjamin-guest pushed a commit to branch master in repository r-cran-scales. commit 799288f9f4caea019ee0f3a6ef9631ceaf0d5cd4 Merge: 0940c69 e581e46 Author: Benjamin Eikel deb...@eikel.org Date: Tue Jun 17 16:46:22 2014 +0200

[med-svn] [r-cran-scales] 04/06: Drop dependency on r-cran-stringr

2014-06-17 Thread Benjamin Eikel
This is an automated email from the git hooks/post-receive script. benjamin-guest pushed a commit to branch master in repository r-cran-scales. commit 1bece2bc1928f459026eb51a64aaf65c667c5300 Author: Benjamin Eikel deb...@eikel.org Date: Tue Jun 17 16:50:44 2014 +0200 Drop dependency on

[med-svn] [r-cran-scales] 03/06: Add new changelog entry

2014-06-17 Thread Benjamin Eikel
This is an automated email from the git hooks/post-receive script. benjamin-guest pushed a commit to branch master in repository r-cran-scales. commit 86e215b5f0bac33b640b4574f434779092c887e7 Author: Benjamin Eikel deb...@eikel.org Date: Tue Jun 17 16:49:57 2014 +0200 Add new changelog

[med-svn] [r-cran-scales] 05/06: Update standards version to 3.9.5

2014-06-17 Thread Benjamin Eikel
This is an automated email from the git hooks/post-receive script. benjamin-guest pushed a commit to branch master in repository r-cran-scales. commit 0c0cc18307b32bd52242906977c91a6269c8da69 Author: Benjamin Eikel deb...@eikel.org Date: Tue Jun 17 16:54:05 2014 +0200 Update standards

[med-svn] [r-cran-scales] branch master updated (0940c69 - 6ae36f5)

2014-06-17 Thread Benjamin Eikel
This is an automated email from the git hooks/post-receive script. benjamin-guest pushed a change to branch master in repository r-cran-scales. from 0940c69 r-cran-scales (0.2.3-1) unstable; urgency=low new e581e46 Imported Upstream version 0.2.4 new 799288f Merge

[med-svn] [r-cran-scales] branch upstream updated (7881420 - e581e46)

2014-06-17 Thread Benjamin Eikel
This is an automated email from the git hooks/post-receive script. benjamin-guest pushed a change to branch upstream in repository r-cran-scales. from 7881420 Imported Upstream version 0.2.3 new e581e46 Imported Upstream version 0.2.4 The 1 revisions listed above as new are

[med-svn] [r-cran-scales] 06/06: Merge upstream license file into copyright

2014-06-17 Thread Benjamin Eikel
This is an automated email from the git hooks/post-receive script. benjamin-guest pushed a commit to branch master in repository r-cran-scales. commit 6ae36f5d9b1e595f1e03c2df19a573191a392fca Author: Benjamin Eikel deb...@eikel.org Date: Tue Jun 17 20:25:19 2014 +0200 Merge upstream

[med-svn] [r-cran-scales] annotated tag upstream/0.2.4 created (now 119e9f1)

2014-06-17 Thread Benjamin Eikel
This is an automated email from the git hooks/post-receive script. benjamin-guest pushed a change to annotated tag upstream/0.2.4 in repository r-cran-scales. at 119e9f1 (tag) tagging e581e4644702cf7baa583e62600e32161a924c28 (commit) replaces upstream/0.2.3 tagged by Benjamin

[med-svn] r17204 - in trunk/packages/R/r-cran-r.methodss3: . tags

2014-06-17 Thread Andreas Tille
Author: tille Date: 2014-06-17 21:10:00 + (Tue, 17 Jun 2014) New Revision: 17204 Added: trunk/packages/R/r-cran-r.methodss3/tags/ trunk/packages/R/r-cran-r.methodss3/tags/1.6.1-1/ Log: Tagged just accepted 1.6.1-1 ___ debian-med-commit

[med-svn] r17205 - in trunk/packages/R/r-cran-sendmailr: . tags

2014-06-17 Thread Andreas Tille
Author: tille Date: 2014-06-17 21:10:59 + (Tue, 17 Jun 2014) New Revision: 17205 Added: trunk/packages/R/r-cran-sendmailr/tags/ trunk/packages/R/r-cran-sendmailr/tags/1.1-2-1/ Log: Tagged 1.1-2-1 ___ debian-med-commit mailing list

[med-svn] r17206 - trunk/packages/mafft/trunk/debian

2014-06-17 Thread Charles Plessy
Author: plessy Date: 2014-06-17 23:00:08 + (Tue, 17 Jun 2014) New Revision: 17206 Modified: trunk/packages/mafft/trunk/debian/control Log: Added substitution variable ${perl:Depends}, used by Debhelper. Modified: trunk/packages/mafft/trunk/debian/control

[med-svn] r17207 - trunk/packages/mafft/trunk/debian

2014-06-17 Thread Charles Plessy
Author: plessy Date: 2014-06-17 23:09:29 + (Tue, 17 Jun 2014) New Revision: 17207 Modified: trunk/packages/mafft/trunk/debian/control Log: Recommend libwww-perl used by the script ?\226?\128?\152seekquencer_premafft.pl?\226?\128?\153. Modified: trunk/packages/mafft/trunk/debian/control