[med-svn] [Git][med-team/kalign][pristine-tar] pristine-tar data for kalign_3.3.orig.tar.gz

2020-11-06 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch pristine-tar at Debian Med / kalign Commits: b3167fc3 by Michael R. Crusoe at 2020-11-06T09:32:23+01:00 pristine-tar data for kalign_3.3.orig.tar.gz - - - - - 2 changed files: - + kalign_3.3.orig.tar.gz.delta - + kalign_3.3.orig.tar.gz.id Changes

[med-svn] [Git][med-team/kalign] Pushed new tag upstream/3.3

2020-11-06 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag upstream/3.3 at Debian Med / kalign -- View it on GitLab: https://salsa.debian.org/med-team/kalign/-/tree/upstream/3.3 You're receiving this email because of your account on salsa.debian.org. ___ debian-med-c

[med-svn] [Git][med-team/kalign][master] 9 commits: debian/watch: fix syntax

2020-11-06 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch master at Debian Med / kalign Commits: 5ffa6aaf by Michael R. Crusoe at 2020-11-06T09:32:12+01:00 debian/watch: fix syntax - - - - - c89a2e5a by Michael R. Crusoe at 2020-11-06T09:32:20+01:00 routine-update: New upstream version - - - - - abbae427 by

[med-svn] [Git][med-team/python-biom-format][master] 2 commits: Build-Depends: python3-pytest-cov

2020-11-06 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch master at Debian Med / python-biom-format Commits: 82fd3855 by Michael R. Crusoe at 2020-11-06T11:20:03+01:00 Build-Depends: python3-pytest-cov - - - - - fe518857 by Michael R. Crusoe at 2020-11-06T11:24:02+01:00 routine-update: Ready to upload to unstable

[med-svn] [Git][med-team/python-biom-format] Pushed new tag debian/2.1.9-1

2020-11-06 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag debian/2.1.9-1 at Debian Med / python-biom-format -- View it on GitLab: https://salsa.debian.org/med-team/python-biom-format/-/tree/debian/2.1.9-1 You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/libvcflib] Pushed new tag debian/1.0.1+dfsg-4

2020-11-06 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag debian/1.0.1+dfsg-4 at Debian Med / libvcflib -- View it on GitLab: https://salsa.debian.org/med-team/libvcflib/-/tree/debian/1.0.1+dfsg-4 You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/libvcflib][master] routine-update: Ready to upload to unstable

2020-11-06 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch master at Debian Med / libvcflib Commits: fad922e7 by Michael R. Crusoe at 2020-10-31T21:57:30+01:00 routine-update: Ready to upload to unstable - - - - - 1 changed file: - debian/changelog Changes: = debian

[med-svn] [Git][med-team/python-biom-format][master] remove .coverage files. Closes: #974050

2020-11-10 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch master at Debian Med / python-biom-format Commits: 34972579 by Michael R. Crusoe at 2020-11-10T08:11:36+01:00 remove .coverage files. Closes: #974050 - - - - - 2 changed files: - debian/changelog - debian/rules Changes

[med-svn] [Git][med-team/python-biom-format][master] routine-update: Ready to upload to unstable

2020-11-10 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch master at Debian Med / python-biom-format Commits: 0b2d9726 by Michael R. Crusoe at 2020-11-10T10:43:29+01:00 routine-update: Ready to upload to unstable - - - - - 1 changed file: - debian/changelog Changes: = debian

[med-svn] [Git][med-team/python-biom-format] Pushed new tag debian/2.1.9-2

2020-11-10 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag debian/2.1.9-2 at Debian Med / python-biom-format -- View it on GitLab: https://salsa.debian.org/med-team/python-biom-format/-/tree/debian/2.1.9-2 You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/mmseqs2][master] routine-update: Ready to upload to unstable

2020-11-15 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch master at Debian Med / mmseqs2 Commits: 6aa90afc by Michael R. Crusoe at 2020-11-15T19:31:25+01:00 routine-update: Ready to upload to unstable - - - - - 2 changed files: - debian/changelog - debian/control Changes

[med-svn] [Git][med-team/mmseqs2] Pushed new tag debian/12-113e3+ds-2

2020-11-15 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag debian/12-113e3+ds-2 at Debian Med / mmseqs2 -- View it on GitLab: https://salsa.debian.org/med-team/mmseqs2/-/tree/debian/12-113e3+ds-2 You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/picard-tools][master] Support non-amd64

2020-11-17 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch master at Debian Med / picard-tools Commits: a6e95fb1 by Michael R. Crusoe at 2020-11-17T23:49:22+01:00 Support non-amd64 - - - - - 4 changed files: - debian/changelog - debian/control - + debian/patches/non-intel-skip-intel-tests - debian/patches/series

[med-svn] [Git][med-team/picard-tools] Pushed new tag debian/2.23.8+dfsg-2

2020-11-18 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag debian/2.23.8+dfsg-2 at Debian Med / picard-tools -- View it on GitLab: https://salsa.debian.org/med-team/picard-tools/-/tree/debian/2.23.8+dfsg-2 You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/picard-tools][master] routine-update: Ready to upload to unstable

2020-11-18 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch master at Debian Med / picard-tools Commits: 37937f2a by Michael R. Crusoe at 2020-11-18T11:04:40+01:00 routine-update: Ready to upload to unstable - - - - - 2 changed files: - debian/changelog - debian/control Changes

[med-svn] [Git][med-team/picard-tools] Pushed new tag debian/2.23.8+dfsg-3

2020-11-18 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag debian/2.23.8+dfsg-3 at Debian Med / picard-tools -- View it on GitLab: https://salsa.debian.org/med-team/picard-tools/-/tree/debian/2.23.8+dfsg-3 You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/picard-tools][master] 2 commits: Oops, should have been Architecture: all everywhere

2020-11-18 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch master at Debian Med / picard-tools Commits: a101c919 by Michael R. Crusoe at 2020-11-18T12:00:52+01:00 Oops, should have been Architecture: all everywhere - - - - - fb26f35d by Michael R. Crusoe at 2020-11-18T12:19:16+01:00 routine-update: Ready to upload

[med-svn] [Git][med-team/simde][master] debian/watch: only find non-release candidates.

2020-11-21 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch master at Debian Med / simde Commits: c69c40d6 by Michael R. Crusoe at 2020-11-21T15:19:10+01:00 debian/watch: only find non-release candidates. - - - - - 2 changed files: - debian/changelog - debian/watch Changes

[med-svn] [Git][med-team/simde] Pushed new tag debian/0.7.0_rc-1-1

2020-11-21 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag debian/0.7.0_rc-1-1 at Debian Med / simde -- View it on GitLab: https://salsa.debian.org/med-team/simde/-/tree/debian/0.7.0_rc-1-1 You're receiving this email because of your account on salsa.debian.org. ___ d

[med-svn] [Git][med-team/simde] Pushed new tag upstream/0.7.0_rc-1

2020-11-21 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag upstream/0.7.0_rc-1 at Debian Med / simde -- View it on GitLab: https://salsa.debian.org/med-team/simde/-/tree/upstream/0.7.0_rc-1 You're receiving this email because of your account on salsa.debian.org. ___ d

[med-svn] [Git][med-team/simde] Pushed new branch debian/experimental

2020-11-21 Thread Michael R. Crusoe
Michael R. Crusoe pushed new branch debian/experimental at Debian Med / simde -- View it on GitLab: https://salsa.debian.org/med-team/simde/-/tree/debian/experimental You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/simde][pristine-tar] pristine-tar data for simde_0.7.0~rc-1.orig.tar.gz

2020-11-21 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch pristine-tar at Debian Med / simde Commits: 1ca7014a by Michael R. Crusoe at 2020-11-21T15:20:40+01:00 pristine-tar data for simde_0.7.0~rc-1.orig.tar.gz - - - - - 2 changed files: - + simde_0.7.0~rc-1.orig.tar.gz.delta - + simde_0.7.0~rc-1.orig.tar.gz.id

[med-svn] [Git][med-team/simde][upstream] New upstream version 0.7.0~rc-1

2020-11-21 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch upstream at Debian Med / simde Commits: 7f504452 by Michael R. Crusoe at 2020-11-21T15:20:29+01:00 New upstream version 0.7.0~rc-1 - - - - - 30 changed files: - .azure-pipelines.yml - .github/workflows/ci.yml - + .github/workflows/codeql-analysis.yml

[med-svn] [Git][med-team/diamond-aligner] Pushed new tag debian/2.0.5-1

2020-11-21 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag debian/2.0.5-1 at Debian Med / diamond-aligner -- View it on GitLab: https://salsa.debian.org/med-team/diamond-aligner/-/tree/debian/2.0.5-1 You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/diamond-aligner] Pushed new tag upstream/2.0.5

2020-11-21 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag upstream/2.0.5 at Debian Med / diamond-aligner -- View it on GitLab: https://salsa.debian.org/med-team/diamond-aligner/-/tree/upstream/2.0.5 You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/diamond-aligner][master] 5 commits: routine-update: New upstream version

2020-11-21 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch master at Debian Med / diamond-aligner Commits: 1088d07a by Michael R. Crusoe at 2020-11-21T19:54:20+01:00 routine-update: New upstream version - - - - - 6e1f144e by Michael R. Crusoe at 2020-11-21T19:54:21+01:00 New upstream version 2.0.5 - - - - - f86a58c3

[med-svn] [Git][med-team/diamond-aligner][upstream] New upstream version 2.0.5

2020-11-21 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch upstream at Debian Med / diamond-aligner Commits: 6e1f144e by Michael R. Crusoe at 2020-11-21T19:54:21+01:00 New upstream version 2.0.5 - - - - - 30 changed files: - CMakeLists.txt - + docs/1 Tutorial.MD - + docs/2 Installation.MD - + docs/3 Command line

[med-svn] [Git][med-team/diamond-aligner][pristine-tar] pristine-tar data for diamond-aligner_2.0.5.orig.tar.xz

2020-11-21 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch pristine-tar at Debian Med / diamond-aligner Commits: 1d319edf by Michael R. Crusoe at 2020-11-21T19:54:23+01:00 pristine-tar data for diamond-aligner_2.0.5.orig.tar.xz - - - - - 2 changed files: - + diamond-aligner_2.0.5.orig.tar.xz.delta - + diamond

[med-svn] [Git][med-team/examl] Pushed new tag debian/3.0.22-3_0exp0simde

2020-11-22 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag debian/3.0.22-3_0exp0simde at Debian Med / examl -- View it on GitLab: https://salsa.debian.org/med-team/examl/-/tree/debian/3.0.22-3_0exp0simde You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/examl] Pushed new branch debian/experimental

2020-11-22 Thread Michael R. Crusoe
Michael R. Crusoe pushed new branch debian/experimental at Debian Med / examl -- View it on GitLab: https://salsa.debian.org/med-team/examl/-/tree/debian/experimental You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/last-align] Pushed new tag debian/1145-2_0exp0simde

2020-11-22 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag debian/1145-2_0exp0simde at Debian Med / last-align -- View it on GitLab: https://salsa.debian.org/med-team/last-align/-/tree/debian/1145-2_0exp0simde You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/last-align] Pushed new branch debian/experimental

2020-11-22 Thread Michael R. Crusoe
Michael R. Crusoe pushed new branch debian/experimental at Debian Med / last-align -- View it on GitLab: https://salsa.debian.org/med-team/last-align/-/tree/debian/experimental You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/clustalo][master] d/rules: avoid s390x segfaulting with gcc-10.2 optimizations by falling back to -O0

2020-11-22 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch master at Debian Med / clustalo Commits: f36aaa16 by Christian Ehrhardt at 2020-11-11T09:50:12+01:00 d/rules: avoid s390x segfaulting with gcc-10.2 optimizations by falling back to -O0 Signed-off-by: Christian Ehrhardt <christian.ehrha...@canonical.

[med-svn] [Git][med-team/clustalo] Pushed new tag debian/1.2.4-7

2020-11-23 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag debian/1.2.4-7 at Debian Med / clustalo -- View it on GitLab: https://salsa.debian.org/med-team/clustalo/-/tree/debian/1.2.4-7 You're receiving this email because of your account on salsa.debian.org. ___ debia

[med-svn] [Git][med-team/clustalo][master] 6 commits: document the s390x fix

2020-11-23 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch master at Debian Med / clustalo Commits: 4428d6f4 by Michael R. Crusoe at 2020-11-23T08:53:01+01:00 document the s390x fix - - - - - 2d1299a1 by Michael R. Crusoe at 2020-11-23T08:53:12+01:00 routine-update: Standards-Version: 4.5.1 - - - - - 7ee348b2 by

[med-svn] [Git][med-team/simde] Pushed new tag debian/0.7.0_rc-1-2

2020-11-23 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag debian/0.7.0_rc-1-2 at Debian Med / simde -- View it on GitLab: https://salsa.debian.org/med-team/simde/-/tree/debian/0.7.0_rc-1-2 You're receiving this email because of your account on salsa.debian.org. ___ d

[med-svn] [Git][med-team/simde][debian/experimental] 5 commits: Tweak -maltivec setting on ppc64

2020-11-23 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch debian/experimental at Debian Med / simde Commits: 2ddbe7c8 by Michael R. Crusoe at 2020-11-22T10:00:47+01:00 Tweak -maltivec setting on ppc64 - - - - - 38ce4677 by Michael R. Crusoe at 2020-11-22T10:01:31+01:00 debian/rules: Adjust compiler version loops to

[med-svn] [Git][med-team/simde][debian/experimental] 2 commits: Don't set a default --builddirectory, as builds that skip tests will fail

2020-11-23 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch debian/experimental at Debian Med / simde Commits: 9715129b by Michael R. Crusoe at 2020-11-23T11:14:11+01:00 Don't set a default --builddirectory, as builds that skip tests will fail - - - - - 43c08b8f by Michael R. Crusoe at 2020-11-23T11:14:12+

[med-svn] [Git][med-team/nipy][master] release candidate versions should use ~

2020-11-25 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch master at Debian Med / nipy Commits: 3c2283b4 by Michael R. Crusoe at 2020-11-25T12:23:28+01:00 release candidate versions should use ~ - - - - - 1 changed file: - debian/watch Changes: = debian/watch

[med-svn] [Git][med-team/salmon] Pushed new tag upstream/1.4.0+ds1

2020-11-26 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag upstream/1.4.0+ds1 at Debian Med / salmon -- View it on GitLab: https://salsa.debian.org/med-team/salmon/-/tree/upstream/1.4.0+ds1 You're receiving this email because of your account on salsa.debian.org. ___ d

[med-svn] [Git][med-team/salmon] Pushed new tag debian/1.4.0+ds1-1

2020-11-26 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag debian/1.4.0+ds1-1 at Debian Med / salmon -- View it on GitLab: https://salsa.debian.org/med-team/salmon/-/tree/debian/1.4.0+ds1-1 You're receiving this email because of your account on salsa.debian.org. ___ d

[med-svn] [Git][med-team/salmon][master] 11 commits: routine-update: New upstream version

2020-11-26 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch master at Debian Med / salmon Commits: 91a79c52 by Michael R. Crusoe at 2020-11-26T16:12:50+01:00 routine-update: New upstream version - - - - - a6b0c12c by Michael R. Crusoe at 2020-11-26T16:12:51+01:00 New upstream version 1.4.0+ds1 - - - - - d56f613e by

[med-svn] [Git][med-team/salmon][upstream] New upstream version 1.4.0+ds1

2020-11-26 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch upstream at Debian Med / salmon Commits: a6b0c12c by Michael R. Crusoe at 2020-11-26T16:12:51+01:00 New upstream version 1.4.0+ds1 - - - - - 30 changed files: - CMakeLists.txt - README.md - current_version.txt - + doc/salmon_logo.png - doc/source

[med-svn] [Git][med-team/salmon][pristine-tar] pristine-tar data for salmon_1.4.0+ds1.orig.tar.xz

2020-11-26 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch pristine-tar at Debian Med / salmon Commits: 8fe269b1 by Michael R. Crusoe at 2020-11-26T16:12:54+01:00 pristine-tar data for salmon_1.4.0+ds1.orig.tar.xz - - - - - 2 changed files: - + salmon_1.4.0+ds1.orig.tar.xz.delta - + salmon_1.4.0+ds1

[med-svn] [Git][med-team/simde][debian/experimental] 2 commits: The whole point of this experiment is to build and run the tests on all...

2020-11-28 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch debian/experimental at Debian Med / simde Commits: 5c032b60 by Michael R. Crusoe at 2020-11-25T09:28:22+01:00 The whole point of this experiment is to build and run the tests on all architectures, so temporarily remove the "nocheck&qu

[med-svn] [Git][med-team/snap-aligner] Pushed new tag debian/0.18_1.0_beta.18+dfsg1-4

2020-11-28 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag debian/0.18_1.0_beta.18+dfsg1-4 at Debian Med / snap-aligner -- View it on GitLab: https://salsa.debian.org/med-team/snap-aligner/-/tree/debian/0.18_1.0_beta.18+dfsg1-4 You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/snap-aligner] Pushed new tag upstream/1.0.0+dfsg

2020-11-28 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag upstream/1.0.0+dfsg at Debian Med / snap-aligner -- View it on GitLab: https://salsa.debian.org/med-team/snap-aligner/-/tree/upstream/1.0.0+dfsg You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/snap-aligner][pristine-tar] pristine-tar data for snap-aligner_1.0.0+dfsg.orig.tar.xz

2020-11-28 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch pristine-tar at Debian Med / snap-aligner Commits: f8df8df9 by Michael R. Crusoe at 2020-11-28T15:36:12+01:00 pristine-tar data for snap-aligner_1.0.0+dfsg.orig.tar.xz - - - - - 2 changed files: - + snap-aligner_1.0.0+dfsg.orig.tar.xz.delta - + snap

[med-svn] [Git][med-team/snap-aligner][master] 12 commits: routine-update: New upstream version

2020-11-28 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch master at Debian Med / snap-aligner Commits: 0440d525 by Michael R. Crusoe at 2020-11-28T15:36:09+01:00 routine-update: New upstream version - - - - - 1c04dae3 by Michael R. Crusoe at 2020-11-28T15:36:10+01:00 New upstream version 1.0.0+dfsg

[med-svn] [Git][med-team/snap-aligner][upstream] New upstream version 1.0.0+dfsg

2020-11-28 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch upstream at Debian Med / snap-aligner Commits: 1c04dae3 by Michael R. Crusoe at 2020-11-28T15:36:10+01:00 New upstream version 1.0.0+dfsg - - - - - 9 changed files: - .gitignore - Makefile - README.md - + SNAPLib/AffineGap.cpp - + SNAPLib/AffineGap.h

[med-svn] [Git][med-team/snap-aligner] Pushed new tag debian/1.0.0+dfsg-1

2020-11-28 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag debian/1.0.0+dfsg-1 at Debian Med / snap-aligner -- View it on GitLab: https://salsa.debian.org/med-team/snap-aligner/-/tree/debian/1.0.0+dfsg-1 You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/snap-aligner][master] 5 commits: Enable building on non-x86 systems via libsimde-dev

2020-11-28 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch master at Debian Med / snap-aligner Commits: 5c5cd54d by Michael R. Crusoe at 2020-11-29T08:40:38+01:00 Enable building on non-x86 systems via libsimde-dev - - - - - 29cb972a by Michael R. Crusoe at 2020-11-29T08:40:39+01:00 debian/patches/fix_segfault

[med-svn] [Git][med-team/python-skbio] Pushed new tag debian/0.5.6-4_0expe0simde

2020-11-29 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag debian/0.5.6-4_0expe0simde at Debian Med / python-skbio -- View it on GitLab: https://salsa.debian.org/med-team/python-skbio/-/tree/debian/0.5.6-4_0expe0simde You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/python-skbio] Pushed new branch debian/experimental

2020-11-29 Thread Michael R. Crusoe
Michael R. Crusoe pushed new branch debian/experimental at Debian Med / python-skbio -- View it on GitLab: https://salsa.debian.org/med-team/python-skbio/-/tree/debian/experimental You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/minimap2] Pushed new tag debian/2.17+dfsg-13_0exp0simde

2020-11-29 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag debian/2.17+dfsg-13_0exp0simde at Debian Med / minimap2 -- View it on GitLab: https://salsa.debian.org/med-team/minimap2/-/tree/debian/2.17+dfsg-13_0exp0simde You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/minimap2] Pushed new branch debian/experimental

2020-11-29 Thread Michael R. Crusoe
Michael R. Crusoe pushed new branch debian/experimental at Debian Med / minimap2 -- View it on GitLab: https://salsa.debian.org/med-team/minimap2/-/tree/debian/experimental You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/pbcopper] Pushed new tag debian/1.8.0+dfsg-3_0exp0simde

2020-11-29 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag debian/1.8.0+dfsg-3_0exp0simde at Debian Med / pbcopper -- View it on GitLab: https://salsa.debian.org/med-team/pbcopper/-/tree/debian/1.8.0+dfsg-3_0exp0simde You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/pbcopper] Pushed new branch debian/experimental

2020-11-29 Thread Michael R. Crusoe
Michael R. Crusoe pushed new branch debian/experimental at Debian Med / pbcopper -- View it on GitLab: https://salsa.debian.org/med-team/pbcopper/-/tree/debian/experimental You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/snap-aligner] Pushed new tag debian/1.0.0+dfsg-2

2020-11-29 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag debian/1.0.0+dfsg-2 at Debian Med / snap-aligner -- View it on GitLab: https://salsa.debian.org/med-team/snap-aligner/-/tree/debian/1.0.0+dfsg-2 You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/snap-aligner][master] proper fix for permissions issue

2020-11-29 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch master at Debian Med / snap-aligner Commits: 28942a2c by Michael R. Crusoe at 2020-11-29T10:24:32+01:00 proper fix for permissions issue - - - - - 3 changed files: - debian/changelog - debian/rules - debian/tests/ref/output.sam Changes

[med-svn] [Git][med-team/hisat2] Pushed new tag debian/2.2.1-2_0exp0simde

2020-11-29 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag debian/2.2.1-2_0exp0simde at Debian Med / hisat2 -- View it on GitLab: https://salsa.debian.org/med-team/hisat2/-/tree/debian/2.2.1-2_0exp0simde You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/hisat2] Pushed new branch debian/experimental

2020-11-29 Thread Michael R. Crusoe
Michael R. Crusoe pushed new branch debian/experimental at Debian Med / hisat2 -- View it on GitLab: https://salsa.debian.org/med-team/hisat2/-/tree/debian/experimental You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/simde] Pushed new tag debian/0.7.0_rc-1-3

2020-11-29 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag debian/0.7.0_rc-1-3 at Debian Med / simde -- View it on GitLab: https://salsa.debian.org/med-team/simde/-/tree/debian/0.7.0_rc-1-3 You're receiving this email because of your account on salsa.debian.org. ___ d

[med-svn] [Git][med-team/simde][debian/experimental] 2 commits: run all the tests but still failing if one fails

2020-11-29 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch debian/experimental at Debian Med / simde Commits: e3a504ee by Michael R. Crusoe at 2020-11-29T13:25:35+01:00 run all the tests but still failing if one fails - - - - - 93a85b99 by Michael R. Crusoe at 2020-11-29T13:26:21+01:00 release debian/0.7.0~rc-1-3 to

[med-svn] [Git][med-team/vg] Pushed new tag debian/1.27.1+ds-2_0exp0simde

2020-11-29 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag debian/1.27.1+ds-2_0exp0simde at Debian Med / vg -- View it on GitLab: https://salsa.debian.org/med-team/vg/-/tree/debian/1.27.1+ds-2_0exp0simde You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/vg] Pushed new branch debian/experimental

2020-11-29 Thread Michael R. Crusoe
Michael R. Crusoe pushed new branch debian/experimental at Debian Med / vg -- View it on GitLab: https://salsa.debian.org/med-team/vg/-/tree/debian/experimental You're receiving this email because of your account on salsa.debian.org. ___ d

[med-svn] [Git][med-team/fermi-lite] Pushed new tag debian/0.1-14_0exp0simde

2020-11-29 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag debian/0.1-14_0exp0simde at Debian Med / fermi-lite -- View it on GitLab: https://salsa.debian.org/med-team/fermi-lite/-/tree/debian/0.1-14_0exp0simde You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/fermi-lite] Pushed new branch debian/experimental

2020-11-29 Thread Michael R. Crusoe
Michael R. Crusoe pushed new branch debian/experimental at Debian Med / fermi-lite -- View it on GitLab: https://salsa.debian.org/med-team/fermi-lite/-/tree/debian/experimental You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/fermi-lite] Pushed new tag debian/0.1-14_0exp1simde

2020-11-29 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag debian/0.1-14_0exp1simde at Debian Med / fermi-lite -- View it on GitLab: https://salsa.debian.org/med-team/fermi-lite/-/tree/debian/0.1-14_0exp1simde You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/fermi-lite][debian/experimental] Fix build-dep on libsimde-dev to force version 0.7.0~rc-1 or newer.

2020-11-29 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch debian/experimental at Debian Med / fermi-lite Commits: 28c88bfb by Michael R. Crusoe at 2020-11-29T20:31:32+01:00 Fix build-dep on libsimde-dev to force version 0.7.0~rc-1 or newer. - - - - - 2 changed files: - debian/changelog - debian/control

[med-svn] [Git][med-team/librcsb-core-wrapper][master] Accept patch from Ubuntu to fix build. Closes: #973249

2020-11-30 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch master at Debian Med / librcsb-core-wrapper Commits: 3e093667 by Michael R. Crusoe at 2020-11-30T10:10:49+01:00 Accept patch from Ubuntu to fix build. Closes: #973249 Thanks to Steve Langasek <steve.langa...@ubuntu.com> - - - - - 3 changed

[med-svn] [Git][med-team/python-cogent] Pushed new tag debian/2020.6.30a0+dfsg-1

2020-11-30 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag debian/2020.6.30a0+dfsg-1 at Debian Med / python-cogent -- View it on GitLab: https://salsa.debian.org/med-team/python-cogent/-/tree/debian/2020.6.30a0+dfsg-1 You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/python-cogent][master] 6 commits: numba is back in the archive

2020-11-30 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch master at Debian Med / python-cogent Commits: b316c606 by Michael R. Crusoe at 2020-11-30T10:24:28+01:00 numba is back in the archive - - - - - 4f0cee7e by Michael R. Crusoe at 2020-11-30T10:36:25+01:00 Only build for Python3.8 as numba does not yet support

[med-svn] [Git][med-team/python-cogent] Deleted tag debian/2020.6.30a0+dfsg-1

2020-11-30 Thread Michael R. Crusoe
Michael R. Crusoe deleted tag debian/2020.6.30a0+dfsg-1 at Debian Med / python-cogent -- You're receiving this email because of your account on salsa.debian.org. ___ debian-med-commit mailing list debian-med-com...@alioth-lists.debian.net

[med-svn] [Git][med-team/python-cogent] Pushed new tag debian/2020.6.30a0+dfsg-1

2020-11-30 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag debian/2020.6.30a0+dfsg-1 at Debian Med / python-cogent -- View it on GitLab: https://salsa.debian.org/med-team/python-cogent/-/tree/debian/2020.6.30a0+dfsg-1 You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/python-cogent][master] adjust autopkgtest for python3.8 only, for now

2020-11-30 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch master at Debian Med / python-cogent Commits: 266ea7eb by Michael R. Crusoe at 2020-11-30T12:03:12+01:00 adjust autopkgtest for python3.8 only, for now - - - - - 1 changed file: - debian/tests/run-unit-test Changes

[med-svn] [Git][med-team/bio-eagle][master] Add patch for compilation on systems without SSE.

2020-12-05 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch master at Debian Med / bio-eagle Commits: bb3394a2 by Michael R. Crusoe at 2020-12-05T21:49:16+01:00 Add patch for compilation on systems without SSE. - - - - - 3 changed files: - debian/changelog - + debian/patches/non_x86_malloc - debian/patches/series

[med-svn] [Git][med-team/scrappie] Pushed new branch mr-c-wip

2020-12-07 Thread Michael R. Crusoe
Michael R. Crusoe pushed new branch mr-c-wip at Debian Med / scrappie -- View it on GitLab: https://salsa.debian.org/med-team/scrappie/-/tree/mr-c-wip You're receiving this email because of your account on salsa.debian.org. ___ debian-med-c

[med-svn] [Git][med-team/scrappie][mr-c-wip] ignore the root Makefile, use cmake

2020-12-07 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch mr-c-wip at Debian Med / scrappie Commits: 7d376d70 by Michael R. Crusoe at 2020-12-07T13:27:18+01:00 ignore the root Makefile, use cmake - - - - - 2 changed files: - debian/rules - − debian/scrappie.install Changes

[med-svn] [Git][med-team/bcftools] Pushed new tag debian/1.9-2

2019-08-06 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag debian/1.9-2 at Debian Med / bcftools -- View it on GitLab: https://salsa.debian.org/med-team/bcftools/tree/debian/1.9-2 You're receiving this email because of your account on salsa.debian.org. ___ debian-med-c

[med-svn] [Git][med-team/bcftools][master] 2 commits: skip i386 due to lack of tabix/libhts

2019-08-06 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch master at Debian Med / bcftools Commits: af239313 by Michael R. Crusoe at 2019-08-06T16:46:10Z skip i386 due to lack of tabix/libhts - - - - - 2d799163 by Michael R. Crusoe at 2019-08-06T17:32:45Z don't parallelize the tests - - - - - 4 changed

[med-svn] [Git][med-team/abyss] Pushed new tag debian/2.2.0-1

2019-08-08 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag debian/2.2.0-1 at Debian Med / abyss -- View it on GitLab: https://salsa.debian.org/med-team/abyss/tree/debian/2.2.0-1 You're receiving this email because of your account on salsa.debian.org. ___ debian-med-c

[med-svn] [Git][med-team/abyss] Pushed new tag upstream/2.2.0

2019-08-08 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag upstream/2.2.0 at Debian Med / abyss -- View it on GitLab: https://salsa.debian.org/med-team/abyss/tree/upstream/2.2.0 You're receiving this email because of your account on salsa.debian.org. ___ debian-med-c

[med-svn] [Git][med-team/abyss][master] 4 commits: New upstream version 2.2.0

2019-08-08 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch master at Debian Med / abyss Commits: 11cdcb81 by Michael R. Crusoe at 2019-08-08T14:48:06Z New upstream version 2.2.0 - - - - - 218e43c8 by Michael R. Crusoe at 2019-08-08T14:48:08Z Update upstream source from tag 'upstream/2.2.0' Update to upstre

[med-svn] [Git][med-team/abyss][upstream] New upstream version 2.2.0

2019-08-08 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch upstream at Debian Med / abyss Commits: 11cdcb81 by Michael R. Crusoe at 2019-08-08T14:48:06Z New upstream version 2.2.0 - - - - - 14 changed files: - .circleci/config.yml - + .clang-format - Assembly/Options.cc - Bloom/Bloom.h - BloomDBG

[med-svn] [Git][med-team/abyss][pristine-tar] pristine-tar data for abyss_2.2.0.orig.tar.gz

2019-08-08 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch pristine-tar at Debian Med / abyss Commits: 4ea2d89c by Michael R. Crusoe at 2019-08-08T14:48:08Z pristine-tar data for abyss_2.2.0.orig.tar.gz - - - - - 2 changed files: - + abyss_2.2.0.orig.tar.gz.delta - + abyss_2.2.0.orig.tar.gz.id Changes

[med-svn] [Git][med-team/abyss] Pushed new tag debian/2.2.1-1

2019-08-13 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag debian/2.2.1-1 at Debian Med / abyss -- View it on GitLab: https://salsa.debian.org/med-team/abyss/tree/debian/2.2.1-1 You're receiving this email because of your account on salsa.debian.org. ___ debian-med-c

[med-svn] [Git][med-team/abyss] Pushed new tag upstream/2.2.1

2019-08-13 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag upstream/2.2.1 at Debian Med / abyss -- View it on GitLab: https://salsa.debian.org/med-team/abyss/tree/upstream/2.2.1 You're receiving this email because of your account on salsa.debian.org. ___ debian-med-c

[med-svn] [Git][med-team/abyss][pristine-tar] pristine-tar data for abyss_2.2.1.orig.tar.gz

2019-08-13 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch pristine-tar at Debian Med / abyss Commits: e79db173 by Michael R. Crusoe at 2019-08-13T10:32:09Z pristine-tar data for abyss_2.2.1.orig.tar.gz - - - - - 2 changed files: - + abyss_2.2.1.orig.tar.gz.delta - + abyss_2.2.1.orig.tar.gz.id Changes

[med-svn] [Git][med-team/python-schema-salad] Pushed new tag debian/4.5.20190621200723-1

2019-08-13 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag debian/4.5.20190621200723-1 at Debian Med / python-schema-salad -- View it on GitLab: https://salsa.debian.org/med-team/python-schema-salad/tree/debian/4.5.20190621200723-1 You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/python-schema-salad] Pushed new tag upstream/4.5.20190621200723

2019-08-13 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag upstream/4.5.20190621200723 at Debian Med / python-schema-salad -- View it on GitLab: https://salsa.debian.org/med-team/python-schema-salad/tree/upstream/4.5.20190621200723 You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/python-schema-salad][master] 7 commits: New upstream version 4.5.20190621200723

2019-08-13 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch master at Debian Med / python-schema-salad Commits: 173490c7 by Michael R. Crusoe at 2019-08-13T11:08:19Z New upstream version 4.5.20190621200723 - - - - - 785fc928 by Michael R. Crusoe at 2019-08-13T11:08:20Z Update upstream source from tag 'ups

[med-svn] [Git][med-team/python-schema-salad][upstream] New upstream version 4.5.20190621200723

2019-08-13 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch upstream at Debian Med / python-schema-salad Commits: 173490c7 by Michael R. Crusoe at 2019-08-13T11:08:19Z New upstream version 4.5.20190621200723 - - - - - 30 changed files: - MANIFEST.in - Makefile - PKG-INFO - README.rst - + requirements.txt

[med-svn] [Git][med-team/python-schema-salad][pristine-tar] pristine-tar data for python-schema-salad_4.5.20190621200723.orig.tar.gz

2019-08-13 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch pristine-tar at Debian Med / python-schema-salad Commits: 76ecc24c by Michael R. Crusoe at 2019-08-13T11:08:20Z pristine-tar data for python-schema-salad_4.5.20190621200723.orig.tar.gz - - - - - 2 changed files: - + python-schema-salad_4.5.20190621200723

[med-svn] [Git][med-team/python-schema-salad][master] 8 commits: New upstream version 4.5.20190729164411

2019-08-16 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch master at Debian Med / python-schema-salad Commits: d812fc3c by Michael R. Crusoe at 2019-08-13T16:53:04Z New upstream version 4.5.20190729164411 - - - - - 98aa8cc4 by Michael R. Crusoe at 2019-08-13T16:55:11Z New upstream version 4.5.20190729164411

[med-svn] [Git][med-team/python-schema-salad][pristine-tar] 2 commits: pristine-tar data for python-schema-salad_4.5.20190729164411.orig.tar.gz

2019-08-16 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch pristine-tar at Debian Med / python-schema-salad Commits: 5a166a7c by Michael R. Crusoe at 2019-08-13T16:53:05Z pristine-tar data for python-schema-salad_4.5.20190729164411.orig.tar.gz - - - - - d88644df by Michael R. Crusoe at 2019-08-16T09:56:37Z pristine

[med-svn] [Git][med-team/python-schema-salad] Pushed new tag upstream/4.5.20190815125611

2019-08-16 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag upstream/4.5.20190815125611 at Debian Med / python-schema-salad -- View it on GitLab: https://salsa.debian.org/med-team/python-schema-salad/tree/upstream/4.5.20190815125611 You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/python-schema-salad] Pushed new tag debian/4.5.20190815125611-1

2019-08-16 Thread Michael R. Crusoe
Michael R. Crusoe pushed new tag debian/4.5.20190815125611-1 at Debian Med / python-schema-salad -- View it on GitLab: https://salsa.debian.org/med-team/python-schema-salad/tree/debian/4.5.20190815125611-1 You're receiving this email because of your account on salsa.debia

[med-svn] [Git][med-team/python-schema-salad][upstream] 2 commits: New upstream version 4.5.20190729164411

2019-08-16 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch upstream at Debian Med / python-schema-salad Commits: d812fc3c by Michael R. Crusoe at 2019-08-13T16:53:04Z New upstream version 4.5.20190729164411 - - - - - ec160bbf by Michael R. Crusoe at 2019-08-16T09:56:36Z New upstream version 4.5.20190815125611

[med-svn] [Git][med-team/python-schema-salad][master] better fix for case sensitive test

2019-08-16 Thread Michael R. Crusoe
Michael R. Crusoe pushed to branch master at Debian Med / python-schema-salad Commits: 11efbd68 by Michael R. Crusoe at 2019-08-16T10:46:45Z better fix for case sensitive test - - - - - 2 changed files: - debian/changelog - debian/patches/lower-case.patch Changes

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