: Debian Med Packaging Team
debian-med-packag...@lists.alioth.debian.org
Uploaders: Sascha Steinbiss sas...@steinbiss.name
-Build-Depends: debhelper (= 9.0.0), hmmer (= 3.1), lua5.1
+Build-Depends: debhelper (= 9.0.0), lua5.1
Standards-Version: 3.9.6
Homepage: http://www.vicbioinformatics.com
Author: sascha-guest
Date: 2015-01-31 13:32:02 + (Sat, 31 Jan 2015)
New Revision: 18667
Removed:
trunk/packages/barrnap/trunk/debian/series
Log:
remove stray series file
Deleted: trunk/packages/barrnap/trunk/debian/series
)
+
+ -- Sascha Steinbiss sas...@steinbiss.name Sat, 31 Jan 2015 10:12:42 +
Added: trunk/packages/barrnap-silva-hmms/trunk/debian/compat
===
--- trunk/packages/barrnap-silva-hmms/trunk/debian/compat
(rev 0
@@
Source: barrnap-silva-hmms
Priority: optional
-Section: non-freescience
+Section: non-free/science
Maintainer: Debian Med Packaging Team
debian-med-packag...@lists.alioth.debian.org
Uploaders: Sascha Steinbiss sas...@steinbiss.name
Build-Depends: debhelper (= 9.0.0), lua5.1
@@ -11,7 +11,6
)
+
+ -- Sascha Steinbiss sas...@steinbiss.name Sat, 31 Jan 2015 10:12:42 +
Added: trunk/packages/barrnap-data-nonfree/trunk/debian/compat
===
--- trunk/packages/barrnap-data-nonfree/trunk/debian/compat
(rev 0
)
+ * Initial release (Closes: #776710)
-- Sascha Steinbiss sas...@steinbiss.name Sat, 31 Jan 2015 10:12:42 +
Modified: trunk/packages/barrnap-data-nonfree/trunk/debian/copyright
===
--- trunk/packages/barrnap-data-nonfree
Author: sascha-guest
Date: 2015-01-31 14:33:26 + (Sat, 31 Jan 2015)
New Revision: 18673
Removed:
trunk/packages/barrnap-silva-hmms/
Log:
delete old data package dir
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Author: sascha-guest
Date: 2015-01-31 21:24:57 + (Sat, 31 Jan 2015)
New Revision: 18691
Modified:
trunk/packages/barrnap/trunk/debian/copyright
Log:
remove rest of SILVA license
Modified: trunk/packages/barrnap/trunk/debian/copyright
Author: sascha-guest
Date: 2015-02-01 09:30:14 + (Sun, 01 Feb 2015)
New Revision: 18704
Added:
trunk/packages/aragorn/trunk/debian/upstream/edam
Log:
add EDAM YAML annotation for aragorn
Added: trunk/packages/aragorn/trunk/debian/upstream/edam
Author: sascha-guest
Date: 2015-02-01 09:11:34 + (Sun, 01 Feb 2015)
New Revision: 18702
Modified:
trunk/packages/barrnap-data-nonfree/trunk/debian/rules
Log:
remove dead code
Modified: trunk/packages/barrnap-data-nonfree/trunk/debian/rules
Author: sascha-guest
Date: 2015-02-01 09:29:44 + (Sun, 01 Feb 2015)
New Revision: 18703
Modified:
trunk/packages/aragorn/trunk/debian/upstream/metadata
Log:
remove stray period
Modified: trunk/packages/aragorn/trunk/debian/upstream/metadata
Author: sascha-guest
Date: 2015-02-01 09:45:19 + (Sun, 01 Feb 2015)
New Revision: 18706
Modified:
trunk/packages/aragorn/trunk/debian/upstream/edam
Log:
fix YAML
Modified: trunk/packages/aragorn/trunk/debian/upstream/edam
Author: sascha-guest
Date: 2015-02-01 15:07:53 + (Sun, 01 Feb 2015)
New Revision: 18714
Modified:
trunk/packages/aragorn/trunk/debian/upstream/edam
Log:
indentation
Modified: trunk/packages/aragorn/trunk/debian/upstream/edam
Author: sascha-guest
Date: 2015-01-31 11:44:29 + (Sat, 31 Jan 2015)
New Revision: 18660
Added:
trunk/packages/barrnap/trunk/debian/README.source
Modified:
trunk/packages/barrnap/trunk/debian/rules
Log:
add README.source
Added: trunk/packages/barrnap/trunk/debian/README.source
Author: sascha-guest
Date: 2015-01-31 11:46:47 + (Sat, 31 Jan 2015)
New Revision: 18662
Removed:
trunk/packages/barrnap/trunk/debian/barrnap-silva-hmms.install
Log:
remove install file
Deleted: trunk/packages/barrnap/trunk/debian/barrnap-silva-hmms.install
Author: sascha-guest
Date: 2015-01-31 11:46:28 + (Sat, 31 Jan 2015)
New Revision: 18661
Modified:
trunk/packages/barrnap/trunk/debian/control
Log:
remove second binary package
Modified: trunk/packages/barrnap/trunk/debian/control
Author: sascha-guest
Date: 2015-01-31 11:51:24 + (Sat, 31 Jan 2015)
New Revision: 18663
Modified:
trunk/packages/barrnap/trunk/debian/barrnap.install
Log:
fix db paths
Modified: trunk/packages/barrnap/trunk/debian/barrnap.install
: #769641)
- -- Sascha Steinbiss sas...@steinbiss.name Fri, 14 Nov 2014 10:12:42 +
+ -- Sascha Steinbiss sas...@steinbiss.name Sat, 31 Jan 2015 10:12:42 +
Modified: trunk/packages/barrnap/trunk/debian/copyright
===
--- trunk
Author: sascha-guest
Date: 2015-02-12 16:35:23 + (Thu, 12 Feb 2015)
New Revision: 18767
Modified:
trunk/packages/barrnap-data-nonfree/trunk/debian/control
trunk/packages/barrnap-data-nonfree/trunk/debian/copyright
Log:
extend copyright file for barrnap non-free HMMs
Modified:
UTC
(rev 18984)
@@ -1,3 +1,9 @@
+genometools (1.5.4-2) experimental; urgency=low
+
+ * Work towards reproducibility.
+
+ -- Sascha Steinbiss sas...@steinbiss.name Sun, 22 Mar 2015 08:09:07 +
+
genometools (1.5.4-1) experimental; urgency=low
* New upstream release.
Modified: trunk
; urgency=low
+
+ * add license agreement dialog, update d/copyright
+
+ -- Sascha Steinbiss sas...@steinbiss.name Sun, 22 Mar 2015 15:34:59 +
+
barrnap-data-nonfree (0.5-1) unstable; urgency=low
* Initial release (Closes: #776710)
Modified: trunk/packages/barrnap-data-nonfree/trunk
/debian/changelog2015-06-06
11:29:58 UTC (rev 19315)
@@ -1,155 +0,0 @@
-genometools (1.5.4-2) experimental; urgency=low
-
- * Work towards reproducibility.
-
- -- Sascha Steinbiss sas...@steinbiss.name Sun, 22 Mar 2015 08:09:07 +
-
-genometools (1.5.4-1) experimental; urgency=low
-
- * New
.
+
+ -- Sascha Steinbiss sas...@steinbiss.name Sat, 06 Jun 2015 09:49:49 +
+
genometools (1.5.4-2) experimental; urgency=low
* Work towards reproducibility.
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http
@@
+genometools (1.5.5-2) unstable; urgency=low
+
+ * Disable faketime on hurd-i386 to fix FTBFS on that arch.
+
+ -- Sascha Steinbiss sas...@steinbiss.name Wed, 10 Jun 2015 10:03:22 +
+
genometools (1.5.5-1) unstable; urgency=low
* New upstream release.
Modified: trunk/packages/genometools
/genometools/trunk/debian/changelog 2015-06-08 18:56:54 UTC
(rev 19320)
+++ trunk/packages/genometools/tags/1.5.5-2/debian/changelog2015-06-10
11:06:30 UTC (rev 19323)
@@ -1,161 +0,0 @@
-genometools (1.5.5-1) unstable; urgency=low
-
- * New upstream release.
-
- -- Sascha Steinbiss sas
Author: sascha-guest
Date: 2015-06-10 11:06:04 + (Wed, 10 Jun 2015)
New Revision: 19322
Modified:
trunk/packages/genometools/trunk/debian/rules
Log:
make decision whether to use faketime arch independent
Modified: trunk/packages/genometools/trunk/debian/rules
/debian/changelog2015-06-22
20:41:17 UTC (rev 19354)
@@ -1,167 +0,0 @@
-genometools (1.5.5-2) unstable; urgency=low
-
- * Disable faketime on hurd-i386 to fix FTBFS on that arch.
-
- -- Sascha Steinbiss sas...@steinbiss.name Wed, 10 Jun 2015 10:03:22 +
-
-genometools (1.5.5-1) unstable
.
+
+ -- Sascha Steinbiss sas...@steinbiss.name Mon, 22 Jun 2015 19:26:35 +
+
genometools (1.5.5-2) unstable; urgency=low
* Disable faketime on hurd-i386 to fix FTBFS on that arch.
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Date: Fri Aug 21 12:00:46 2015 +
update upstream
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Date: Fri Aug 21 08:55:00 2015 +
Imported Upstream
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Date: Fri Aug 21 08:55:01 2015 +
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Date: Fri Aug 21 08:55:01 2015 +
pristine-tar
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commit 3cf427041cb910260c8b16dc41847982b2524013
Author: Sascha Steinbiss sas...@steinbiss.name
Date: Fri Aug 21 22:29:50 2015 +
adjust d/changelog
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commit 87828720663430c1eafea89cf18017f79a4ba9a0
Author: Sascha Steinbiss sas...@steinbiss.name
Date: Sat Aug 22 00:08:40 2015 +
Revert adjust d
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commit d6202c57e1d082fec514cd650d929772cc59c317
Author: Sascha Steinbiss sas...@steinbiss.name
Date: Sat Aug 22 00:07:42 2015 +
handle python module
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new 8782872 Revert adjust d/changelog
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replaces upstream/3.2.0
tagged by Sascha Steinbiss
Author: sascha-guest
Date: 2015-08-20 23:03:33 + (Thu, 20 Aug 2015)
New Revision: 19983
Modified:
trunk/community/website/docs/policy.xml
Log:
adjust --svn-no-autodch - --svn-noautodch
Modified: trunk/community/website/docs/policy.xml
/trunk/debian/changelog 2015-07-29 18:17:03 UTC
(rev 19765)
@@ -1,3 +1,10 @@
+barrnap (0.7+dfsg-1) unstable; urgency=low
+
+ * New upstream release.
+ * Remove Suggests: to non-existent barrnap=data-nonfree package
+
+ -- Sascha Steinbiss sas...@steinbiss.name Wed, 29 Jul 2015 18:05:14
Author: sascha-guest
Date: 2015-07-29 18:47:47 + (Wed, 29 Jul 2015)
New Revision: 19766
Added:
trunk/packages/tantan/trunk/debian/lintian-overrides
Log:
add lintian override for hardening in tantan
Added: trunk/packages/tantan/trunk/debian/lintian-overrides
Author: sascha-guest
Date: 2015-08-02 10:08:44 + (Sun, 02 Aug 2015)
New Revision: 19813
Added:
trunk/packages/barrnap/tags/0.7+dfsg-1/
Log:
[svn-buildpackage] Tagging barrnap 0.7+dfsg-1
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Author: sascha-guest
Date: 2015-08-02 10:08:33 + (Sun, 02 Aug 2015)
New Revision: 19812
Added:
trunk/packages/barrnap/tags/
Removed:
trunk/packages/barrnap/trunk/tags/
Log:
move tags directory
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Author: sascha-guest
Date: 2015-08-02 10:07:49 + (Sun, 02 Aug 2015)
New Revision: 19811
Added:
trunk/packages/barrnap/trunk/tags/
Log:
make tags directory
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Author: sascha-guest
Date: 2015-07-29 06:07:37 + (Wed, 29 Jul 2015)
New Revision: 19732
Added:
trunk/packages/aegean/tags/0.13.0+dfsg-1/
Log:
[svn-buildpackage] Tagging aegean 0.13.0+dfsg-1
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/aegean/trunk/debian/changelog2015-07-28 18:05:22 UTC
(rev 19728)
+++ trunk/packages/aegean/trunk/debian/changelog2015-07-28 19:02:54 UTC
(rev 19729)
@@ -1,3 +1,9 @@
+aegean (0.13.0+dfsg-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Sascha Steinbiss sas
(Closes: #XX)
+ * Initial release (Closes: #793907)
- -- Sascha Steinbiss sas...@steinbiss.name Mon, 13 Jul 2015 20:56:22 +
+ -- Sascha Steinbiss sas...@steinbiss.name Tue, 28 Jul 2015 20:20:22 +
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missing copyright holder in d/copyright
+ * Fix machine readable license code
+
+ -- Sascha Steinbiss sas...@steinbiss.name Tue, 04 Aug 2015 23:24:50 +
+
tantan (13-1) unstable; urgency=low
* Initial release (Closes: #793907)
Modified: trunk/packages/tantan/trunk/debian/copyright
Author: sascha-guest
Date: 2015-08-08 12:09:34 + (Sat, 08 Aug 2015)
New Revision: 19895
Modified:
trunk/packages/tantan/trunk/debian/copyright
Log:
add Altschul and Yu to d/copyright
Modified: trunk/packages/tantan/trunk/debian/copyright
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commit 9a22fc75917e7b0f4b53a9ca44b6ce37f68b5319
Author: Sascha Steinbiss sas...@steinbiss.name
Date: Sun Aug 23 20:54:52 2015 +
cosmetics
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Author: Sascha Steinbiss sas...@steinbiss.name
Date: Sun Aug 23 15:37:05 2015 +
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Date: Sun Aug 23 15:36:40 2015 +
start 2.1.1
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commit 13afcd8ed55a55223fe883bcb125d5d67d28f61c
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Date: Mon Aug 24 19:20:04 2015 +
patches
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...-libz2
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Date: Mon Aug 24 21:27:53 2015 +
pristine-tar data
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Date: Sun Aug 23 15:39:44 2015 +
pristine-tar data
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commit deb5e7469c14c24edd800606f3ab68a7911d9753
Author: Sascha Steinbiss sas...@steinbiss.name
Date: Mon Aug 24 21:16:24 2015 +
add metadata for citation
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commit 64395d5c818d04209715c1636bcbffd6cbb012fd
Author: Sascha Steinbiss sas...@steinbiss.name
Date: Mon Aug 24 21:24:38 2015 +
update copyright
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commit 2169066fe7c2a49884068bf75fa455d0c3d72746
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Date: Mon Aug 24 19:23:50 2015 +
Imported Upstream version
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Date: Mon Aug 24 20:29:34 2015 +
patches
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Date: Mon Aug 24 19:23:50 2015 +
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commit ae0f15395e196add53cc19cf4c0875f2b188643b
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Date: Mon Aug 24 21:16:15 2015 +
improve description
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commit 3c56eb5cb73fa812177cfe26fcb1a2bbff4bd9f3
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Date: Mon Aug 24 19:23:21 2015 +
update version
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commit cf30e28bf55a0a8f2057ef3d1ce061d3295c6586
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Date: Mon Aug 24 21:10:58 2015 +
finalize new patches
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commit 4fda3625913140085cfbfb2e486ddec6d067f51a
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Date: Mon Aug 24 19:20:27 2015 +
add patches
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commit b02dea4ce83fb5ffc6067946d1774f83e7c123af
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Date: Mon Aug 24 21:19:15 2015 +
update changelog
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Date: Mon Aug 24 22:47:18 2015 +
fix recommendation
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Date: Mon Aug 24 22:38:21 2015 +
clean up d/rules
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Date: Mon Aug 24 22:39:10 2015 +
cme fix dpkg
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add runtime dependencies
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commit 984b297256c2022876bae0b6b1557fdf1c95c95c
Author: Sascha Steinbiss sas...@steinbiss.name
Date: Mon Aug 24 22:19:34 2015 +
get package to almost
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from 9b2bdfb Updated changelog with ITP number
new 39b4dbf Imported Upstream version 1.0.0
new abbcc40 Merge tag 'upstream/1.0.0'
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tagged by Sascha Steinbiss
on Mon Aug 24 21:54
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commit 4b44c4b936f124ebe0b7e77a68e97e72b99299bb
Author: Sascha Steinbiss sas...@steinbiss.name
Date: Mon Aug 24 21:54:34 2015 +
pristine-tar data
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commit abbcc4077fd840df65b485b2b02e447311871dbc
Merge: 9b2bdfb 39b4dbf
Author: Sascha Steinbiss sas...@steinbiss.name
Date: Mon Aug 24 21:54:34 2015 +
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commit 9c7092754c1be9f5c6b0ca3cf1e5d38b3bd4
Author: Sascha Steinbiss sas...@steinbiss.name
Date: Mon Aug 24 22:22:01 2015 +
add citation
---
debian
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in repository kmc.
commit dac085f043991b79043cd263315e23bff3b550d7
Merge: 45fd245 18523a8
Author: Sascha Steinbiss sas...@steinbiss.name
Date: Tue Aug 25 14:57:18 2015 +
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commit 18523a818c564a31142d37ac251fe21d63901c2d
Author: Sascha Steinbiss sas...@steinbiss.name
Date: Tue Aug 25 14:57:16 2015 +
Imported Upstream version
18523a818c564a31142d37ac251fe21d63901c2d (commit)
replaces upstream/2.1.1
tagged by Sascha Steinbiss
on Tue Aug 25 14:57:18 2015 +
- Log -
Upstream version 2.2
Sascha Steinbiss (3):
Imported Upstream version 2.2
Imported Upstream version
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new 18523a8 Imported Upstream version 2.2
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from 64395d5 update copyright
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commit c669aef1b03788553ee2d2a4a977c5e71aaf776d
Author: Sascha Steinbiss sas...@steinbiss.name
Date: Tue Aug 25 14:57:18 2015 +
pristine-tar data
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commit 80200e8844d5375ee198a7722a06ef635858e2e0
Author: Sascha Steinbiss sas...@steinbiss.name
Date: Tue Aug 25 14:56:30 2015 +
Imported Upstream version
/genometools/trunk/debian/changelog 2015-11-09 09:06:04 UTC
(rev 20452)
+++ trunk/packages/genometools/tags/1.5.7-3/debian/changelog2015-11-09
19:51:01 UTC (rev 20454)
@@ -1,186 +0,0 @@
-genometools (1.5.7-2) unstable; urgency=low
-
- * disable parallel building
-
- -- Sascha Steinbiss <
@@
+genometools (1.5.7-3) unstable; urgency=low
+
+ * d/control: remove obsolete dependency on libncurses5
+Closes: #804576
+
+ -- Sascha Steinbiss <sas...@steinbiss.name> Mon, 09 Nov 2015 19:15:29 +
+
genometools (1.5.7-2) unstable; urgency=low
* disable parallel building
Modified:
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in repository fastaq.
from def7b1f remove numpy dependency
new 3817361 Imported Upstream version 3.10.1
new a80b405 Merge tag 'upstream/3.10.1'
new
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commit dbdc3d8809d5a3b7e552a4fb7541070e0855f38e
Author: Sascha Steinbiss <sas...@steinbiss.name>
Date: Mon Nov 16 19:20:01 2015 +
new upstream v
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