Michael R. Crusoe pushed to branch master at Debian Med / unicycler
Commits: 2623e20a by Michael R. Crusoe at 2019-01-18T10:35:16Z Inherit and use LDFLAGS and CPPFLAGS - - - - - 04164425 by Michael R. Crusoe at 2019-01-18T10:35:59Z Mark unicycler-data as Multi-Arch: foreign, as recommended by the Multiarch hinter. - - - - - 6d5abf3d by Michael R. Crusoe at 2019-01-18T11:05:29Z Standards-Version: 4.3.0, no changes needed - - - - - 4 changed files: - debian/changelog - debian/control - + debian/patches/append_flags - debian/patches/series Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,13 @@ +unicycler (0.4.7+dfsg-3) UNRELEASED; urgency=medium + + * Team upload. + * Inherit and use LDFLAGS and CPPFLAGS + * Mark unicycler-data as Multi-Arch: foreign, as recommended by the + Multiarch hinter. + * Standards-Version: 4.3.0, no changes needed + + -- Michael R. Crusoe <michael.cru...@gmail.com> Fri, 18 Jan 2019 02:34:45 -0800 + unicycler (0.4.7+dfsg-2) unstable; urgency=medium [ Andreas Tille ] ===================================== debian/control ===================================== @@ -17,7 +17,7 @@ Build-Depends: debhelper (>= 11~), spades, libseqan2-dev, zlib1g-dev -Standards-Version: 4.2.1 +Standards-Version: 4.3.0 Vcs-Browser: https://salsa.debian.org/med-team/unicycler Vcs-Git: https://salsa.debian.org/med-team/unicycler.git Homepage: https://github.com/rrwick/Unicycler @@ -45,6 +45,7 @@ Description: hybrid assembly pipeline for bacterial genomes Package: unicycler-data Architecture: all +Multi-Arch: foreign Depends: ${misc:Depends} Description: hybrid assembly pipeline for bacterial genomes (data package) Unicycler is an assembly pipeline for bacterial genomes. It can assemble ===================================== debian/patches/append_flags ===================================== @@ -0,0 +1,19 @@ +From: Michael R. Crusoe <michael.cru...@gmail.com> +Subject: Inherit and use LDFLAGS and CPPFLAGS +--- unicycler.orig/Makefile ++++ unicycler/Makefile +@@ -66,7 +66,7 @@ + + # These flags are required for the build to work. + FLAGS = -std=c++14 -Iunicycler/include -fPIC +-LDFLAGS = -shared -lz ++LDFLAGS += -shared -lz + + + # Platform-specific stuff (for Seqan) +@@ -115,4 +115,4 @@ + $(RM) $(TARGET) + + %.o: %.cpp $(HEADERS) +- $(CXX) $(FLAGS) $(CXXFLAGS) -c -o $@ $< ++ $(CXX) $(CPPFLAGS) $(FLAGS) $(CXXFLAGS) -c -o $@ $< ===================================== debian/patches/series ===================================== @@ -1,3 +1,4 @@ spades.patch # bowtie.patch install_wo_extra_steps.patch +append_flags View it on GitLab: https://salsa.debian.org/med-team/unicycler/compare/fd8e7ad4395656f994000318eeea921abfa21b28...6d5abf3dab4928cb6a555eb2b83c2f5eb1b74ecd -- View it on GitLab: https://salsa.debian.org/med-team/unicycler/compare/fd8e7ad4395656f994000318eeea921abfa21b28...6d5abf3dab4928cb6a555eb2b83c2f5eb1b74ecd You're receiving this email because of your account on salsa.debian.org.
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