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domibel pushed a commit to branch master
in repository bamtools.
commit 800ce5c0649732b5e7f2997af44f9f5278a65158
Author: Dominique Belhachemi <domi...@debian.org>
Date: Sun Dec 20 18:01:22 2015 -0500
move sam_spec_example.* into debian/
---
debian/patches/add_sam_spec_example.patch | 13 -------------
debian/patches/series | 1 -
sam_spec_example.bam => debian/sam_spec_example.bam | Bin
debian/sam_spec_example.sam | 8 ++++++++
debian/source/include-binaries | 2 +-
5 files changed, 9 insertions(+), 15 deletions(-)
diff --git a/debian/patches/add_sam_spec_example.patch
b/debian/patches/add_sam_spec_example.patch
deleted file mode 100644
index a6f010c..0000000
--- a/debian/patches/add_sam_spec_example.patch
+++ /dev/null
@@ -1,13 +0,0 @@
-Description: sam example from SAM/BAM Format Specification
-
---- /dev/null
-+++ bamtools-2.4.0+dfsg/sam_spec_example.sam
-@@ -0,0 +1,8 @@
-+@HD VN:1.5 SO:coordinate
-+@SQ SN:ref LN:45
-+r001 99 ref 7 30 8M2I4M1D3M = 37 39
TTAGATAAAGGATACTG *
-+r002 0 ref 9 30 3S6M1P1I4M * 0 0
AAAAGATAAGGATA *
-+r003 0 ref 9 30 5S6M * 0 0
GCCTAAGCTAA * SA:Z:ref,29,-,6H5M,17,0;
-+r004 0 ref 16 30 6M14N5M * 0 0
ATAGCTTCAGC *
-+r003 2064 ref 29 17 6H5M * 0 0 TAGGC
* SA:Z:ref,9,+,5S6M,30,1;
-+r001 147 ref 37 30 9M = 7 -39
CAGCGGCAT * NM:i:1
diff --git a/debian/patches/series b/debian/patches/series
index 0961fb3..8e3563c 100644
--- a/debian/patches/series
+++ b/debian/patches/series
@@ -6,4 +6,3 @@
0006-Fix-Doxyfile-input-source-path.patch
0007-Big_Endian.patch
0008_Cmake_Test.patch
-add_sam_spec_example.patch
diff --git a/sam_spec_example.bam b/debian/sam_spec_example.bam
similarity index 100%
rename from sam_spec_example.bam
rename to debian/sam_spec_example.bam
diff --git a/debian/sam_spec_example.sam b/debian/sam_spec_example.sam
new file mode 100644
index 0000000..01490f5
--- /dev/null
+++ b/debian/sam_spec_example.sam
@@ -0,0 +1,8 @@
+@HD VN:1.5 SO:coordinate
+@SQ SN:ref LN:45
+r001 99 ref 7 30 8M2I4M1D3M = 37 39
TTAGATAAAGGATACTG *
+r002 0 ref 9 30 3S6M1P1I4M * 0 0
AAAAGATAAGGATA *
+r003 0 ref 9 30 5S6M * 0 0
GCCTAAGCTAA * SA:Z:ref,29,-,6H5M,17,0;
+r004 0 ref 16 30 6M14N5M * 0 0
ATAGCTTCAGC *
+r003 2064 ref 29 17 6H5M * 0 0 TAGGC
* SA:Z:ref,9,+,5S6M,30,1;
+r001 147 ref 37 30 9M = 7 -39
CAGCGGCAT * NM:i:1
diff --git a/debian/source/include-binaries b/debian/source/include-binaries
index a701cd4..130b83c 100644
--- a/debian/source/include-binaries
+++ b/debian/source/include-binaries
@@ -1 +1 @@
-sam_spec_example.bam
+debian/sam_spec_example.bam
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