[med-svn] [jellyfish1] tag debian/1.1.11-1 deleted (was e2aaba4)

2017-08-08 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to tag debian/1.1.11-1 in repository jellyfish1. *** WARNING: tag debian/1.1.11-1 was deleted! *** was e2aaba4 Upload to unstable This change permanently discards the following revisions:

[med-svn] [idba] branch master updated (f482fd7 -> e8a7213)

2017-08-08 Thread Steffen Möller
This is an automated email from the git hooks/post-receive script. moeller pushed a change to branch master in repository idba. from f482fd7 Review for adding registry references new e8a7213 Preparing for reproducible builds The 1 revisions listed above as "new" are entirely

[med-svn] [idba] 01/01: Preparing for reproducible builds

2017-08-08 Thread Steffen Möller
This is an automated email from the git hooks/post-receive script. moeller pushed a commit to branch master in repository idba. commit e8a721342f8d7ffbd8eb70069e65607fe3db77b5 Author: Steffen Moeller Date: Tue Aug 8 10:37:50 2017 +0200 Preparing for reproducible

[med-svn] [idba] 01/01: Review for adding registry references

2017-08-08 Thread Steffen Möller
This is an automated email from the git hooks/post-receive script. moeller pushed a commit to branch master in repository idba. commit f482fd72c2701d1926bb7ce9ce5e5e1921bff3aa Author: Steffen Moeller Date: Tue Aug 8 02:25:42 2017 +0200 Review for adding registry

[med-svn] [idba] branch master updated (12107ac -> f482fd7)

2017-08-08 Thread Steffen Möller
This is an automated email from the git hooks/post-receive script. moeller pushed a change to branch master in repository idba. from 12107ac Adapt patches + upload to unstable new f482fd7 Review for adding registry references The 1 revisions listed above as "new" are entirely

[med-svn] [bcftools] branch master updated (608f125 -> a9e105b)

2017-08-08 Thread Afif Elghraoui
This is an automated email from the git hooks/post-receive script. afif pushed a change to branch master in repository bcftools. from 608f125 Update changelog new b7286cf Update debian/tests for new build system new fd48880 Add lintian override for autopkgtest

[med-svn] [bcftools] 03/03: releasing package bcftools version 1.5-1~exp1

2017-08-08 Thread Afif Elghraoui
This is an automated email from the git hooks/post-receive script. afif pushed a commit to branch master in repository bcftools. commit a9e105b538223f5a304a7ab311e38b3cf41ed69a Author: Afif Elghraoui Date: Tue Aug 8 12:36:32 2017 -0400 releasing package bcftools version

[med-svn] [bcftools] 01/03: Update debian/tests for new build system

2017-08-08 Thread Afif Elghraoui
This is an automated email from the git hooks/post-receive script. afif pushed a commit to branch master in repository bcftools. commit b7286cf5b67dbaf3bc090437452ffbcfc65e9bc5 Author: Afif Elghraoui Date: Tue Aug 8 11:33:51 2017 -0400 Update debian/tests for new build

[med-svn] [bcftools] annotated tag debian/1.5-1_exp1 created (now 5c63122)

2017-08-08 Thread Afif Elghraoui
This is an automated email from the git hooks/post-receive script. afif pushed a change to annotated tag debian/1.5-1_exp1 in repository bcftools. at 5c63122 (tag) tagging a9e105b538223f5a304a7ab311e38b3cf41ed69a (commit) replaces debian/1.4.1-2 tagged by Afif Elghraoui

[med-svn] [bcftools] 02/03: Add lintian override for autopkgtest control

2017-08-08 Thread Afif Elghraoui
This is an automated email from the git hooks/post-receive script. afif pushed a commit to branch master in repository bcftools. commit fd488802570a0dfa05f86832f7ca490191287a9c Author: Afif Elghraoui Date: Tue Aug 8 12:34:59 2017 -0400 Add lintian override for

[med-svn] [crac] branch master updated (2125ca3 -> 095db89)

2017-08-08 Thread Sascha Steinbiss
This is an automated email from the git hooks/post-receive script. satta pushed a change to branch master in repository crac. from 2125ca3 Corrected upstream name to CRAC new 095db89 make build reproducible The 1 revisions listed above as "new" are entirely new to this

[med-svn] [crac] 01/01: make build reproducible

2017-08-08 Thread Sascha Steinbiss
This is an automated email from the git hooks/post-receive script. satta pushed a commit to branch master in repository crac. commit 095db8978b5b9d94d4bffd849072cc204bf49f45 Author: Sascha Steinbiss Date: Tue Aug 8 21:23:06 2017 +0200 make build reproducible ---

[med-svn] [crac] annotated tag debian/2.5.0+dfsg-2 created (now 31e664f)

2017-08-08 Thread Sascha Steinbiss
This is an automated email from the git hooks/post-receive script. satta pushed a change to annotated tag debian/2.5.0+dfsg-2 in repository crac. at 31e664f (tag) tagging 095db8978b5b9d94d4bffd849072cc204bf49f45 (commit) replaces upstream/2.5.0+dfsg tagged by Sascha Steinbiss

[med-svn] [muscle] branch master updated (31bca20 -> 13a8b5a)

2017-08-08 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch master in repository muscle. from 31bca20 Updated registry entries new 3bd817a cme fix dpkg-control new 6a3cc1a hardening=+all new 13a8b5a Fix typo and upload

[med-svn] [muscle] 03/03: Fix typo and upload to unstable

2017-08-08 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository muscle. commit 13a8b5a563d63482492dd8f5f60a4387bdefa52d Author: Andreas Tille Date: Thu Jun 30 08:38:35 2016 +0200 Fix typo and upload to unstable ---

[med-svn] [muscle] 01/03: cme fix dpkg-control

2017-08-08 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository muscle. commit 3bd817a70e8f036d3c3f0344a7a17a4beab36230 Author: Andreas Tille Date: Thu Jun 30 08:35:45 2016 +0200 cme fix dpkg-control ---

[med-svn] [muscle] 02/03: hardening=+all

2017-08-08 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository muscle. commit 6a3cc1a336b46abad859cdf1d94c0700e076479c Author: Andreas Tille Date: Thu Jun 30 08:36:25 2016 +0200 hardening=+all ---

[med-svn] [muscle] 01/03: fix FTCBFS

2017-08-08 Thread Sascha Steinbiss
This is an automated email from the git hooks/post-receive script. satta pushed a commit to branch master in repository muscle. commit 749c18473aed0601c3329944c13c14feedc6ef45 Author: Sascha Steinbiss Date: Tue Aug 8 22:11:10 2017 +0200 fix FTCBFS --- debian/changelog

[med-svn] [muscle] 03/03: give credit for patch

2017-08-08 Thread Sascha Steinbiss
This is an automated email from the git hooks/post-receive script. satta pushed a commit to branch master in repository muscle. commit b87daad02c0080e94911f4a57ee282cd7629488b Author: Sascha Steinbiss Date: Tue Aug 8 22:12:06 2017 +0200 give credit for patch ---

[med-svn] [muscle] 02/03: bump Standards-Version

2017-08-08 Thread Sascha Steinbiss
This is an automated email from the git hooks/post-receive script. satta pushed a commit to branch master in repository muscle. commit 244f8ea00c8ede348a1f0bd1c0a28873fe2a7ff5 Author: Sascha Steinbiss Date: Tue Aug 8 22:11:27 2017 +0200 bump Standards-Version ---

[med-svn] [muscle] branch master updated (13a8b5a -> b87daad)

2017-08-08 Thread Sascha Steinbiss
This is an automated email from the git hooks/post-receive script. satta pushed a change to branch master in repository muscle. from 13a8b5a Fix typo and upload to unstable new 749c184 fix FTCBFS new 244f8ea bump Standards-Version new b87daad give credit

[med-svn] [muscle] annotated tag debian/1%3.8.31+dfsg-3 created (now 1ad3277)

2017-08-08 Thread Sascha Steinbiss
This is an automated email from the git hooks/post-receive script. satta pushed a change to annotated tag debian/1%3.8.31+dfsg-3 in repository muscle. at 1ad3277 (tag) tagging b87daad02c0080e94911f4a57ee282cd7629488b (commit) replaces upstream/3.8.31+dfsg tagged by Sascha

[med-svn] [python-schema-salad] branch upstream updated (f5d6df0 -> 2d7cb0e)

2017-08-08 Thread Michael Crusoe
This is an automated email from the git hooks/post-receive script. misterc-guest pushed a change to branch upstream in repository python-schema-salad. from f5d6df0 New upstream version 2.2.2017080227 new f4f79fa New upstream version 2.2.20170119151016 new 2d7cb0e

[med-svn] [python-schema-salad] 01/02: pristine-tar data for python-schema-salad_2.2.20170119151016.orig.tar.gz

2017-08-08 Thread Michael Crusoe
This is an automated email from the git hooks/post-receive script. misterc-guest pushed a commit to branch pristine-tar in repository python-schema-salad. commit 6b053dc64b1630c4a82878753828f8004706db34 Author: Michael R. Crusoe Date: Wed Jan 25 23:46:34 2017 -0800

[med-svn] [python-schema-salad] branch pristine-tar updated (717f27b -> f6f2bdb)

2017-08-08 Thread Michael Crusoe
This is an automated email from the git hooks/post-receive script. misterc-guest pushed a change to branch pristine-tar in repository python-schema-salad. from 717f27b pristine-tar data for python-schema-salad_2.2.2017080227.orig.tar.gz new 6b053dc pristine-tar data for

[med-svn] [python-schema-salad] 02/02: pristine-tar data for python-schema-salad_2.6.20170630075932.orig.tar.gz

2017-08-08 Thread Michael Crusoe
This is an automated email from the git hooks/post-receive script. misterc-guest pushed a commit to branch pristine-tar in repository python-schema-salad. commit f6f2bdbd46aaa05f387d9d749eaa07c3a870b1b1 Author: Michael R. Crusoe Date: Wed Jul 5 01:49:23 2017 -0700

[med-svn] [python-schema-salad] 01/07: New upstream version 2.2.20170119151016

2017-08-08 Thread Michael Crusoe
This is an automated email from the git hooks/post-receive script. misterc-guest pushed a commit to branch master in repository python-schema-salad. commit f4f79faffe0e55bc2e2cfc83c36addad345a973e Author: Michael R. Crusoe Date: Wed Jan 25 23:46:34 2017 -0800

[med-svn] [python-schema-salad] 02/07: Merge tag 'upstream/2.2.20170119151016'

2017-08-08 Thread Michael Crusoe
This is an automated email from the git hooks/post-receive script. misterc-guest pushed a commit to branch master in repository python-schema-salad. commit 495815943f73ca6e29d50ceea7a81484af3f8dec Merge: 7576356 f4f79fa Author: Michael R. Crusoe Date: Wed Jan 25

[med-svn] [python-schema-salad] 03/07: New upstream release

2017-08-08 Thread Michael Crusoe
This is an automated email from the git hooks/post-receive script. misterc-guest pushed a commit to branch master in repository python-schema-salad. commit 518c0a4a3d6bf7088e3415122e38fbc33c0b Author: Michael R. Crusoe Date: Wed Jan 25 23:47:14 2017 -0800

[med-svn] [python-schema-salad] branch master updated (7576356 -> 2d799bc)

2017-08-08 Thread Michael Crusoe
This is an automated email from the git hooks/post-receive script. misterc-guest pushed a change to branch master in repository python-schema-salad. from 7576356 remove errant .coverage file new f4f79fa New upstream version 2.2.20170119151016 new 4958159 Merge tag

[med-svn] [python-schema-salad] 07/07: generate additional manpage

2017-08-08 Thread Michael Crusoe
This is an automated email from the git hooks/post-receive script. misterc-guest pushed a commit to branch master in repository python-schema-salad. commit 2d799bcc38deca7aaf0063ce913818f6b5078eb7 Author: Michael R. Crusoe Date: Wed Jul 5 01:56:50 2017 -0700

[med-svn] [python-schema-salad] 06/07: bump version

2017-08-08 Thread Michael Crusoe
This is an automated email from the git hooks/post-receive script. misterc-guest pushed a commit to branch master in repository python-schema-salad. commit 0c6594584798c32a469479a43b661614d4f33b34 Author: Michael R. Crusoe Date: Wed Jul 5 01:50:23 2017 -0700

[med-svn] [python-schema-salad] 05/07: Updated version 2.6.20170630075932 from 'upstream/2.6.20170630075932'

2017-08-08 Thread Michael Crusoe
This is an automated email from the git hooks/post-receive script. misterc-guest pushed a commit to branch master in repository python-schema-salad. commit 8a8eec8b850aa35e6f6d87d2091689b79b605c19 Merge: 518 2d7cb0e Author: Michael R. Crusoe Date: Wed Jul 5

[med-svn] [python-schema-salad] annotated tag upstream/2.2.20170119151016 created (now 1662e29)

2017-08-08 Thread Michael Crusoe
This is an automated email from the git hooks/post-receive script. misterc-guest pushed a change to annotated tag upstream/2.2.20170119151016 in repository python-schema-salad. at 1662e29 (tag) tagging f4f79faffe0e55bc2e2cfc83c36addad345a973e (commit) replaces

[med-svn] [python-schema-salad] tag debian/2.6.20170630075932-1 created (now 2d799bc)

2017-08-08 Thread Michael Crusoe
This is an automated email from the git hooks/post-receive script. misterc-guest pushed a change to tag debian/2.6.20170630075932-1 in repository python-schema-salad. at 2d799bc (commit) No new revisions were added by this update. -- Alioth's /usr/local/bin/git-commit-notice on

[med-svn] [python-schema-salad] annotated tag upstream/2.6.20170630075932 created (now ce18693)

2017-08-08 Thread Michael Crusoe
This is an automated email from the git hooks/post-receive script. misterc-guest pushed a change to annotated tag upstream/2.6.20170630075932 in repository python-schema-salad. at ce18693 (tag) tagging 2d7cb0e0d5882a1ae86844dc3175144f281b4147 (commit) replaces

[med-svn] [python-schema-salad] branch master updated (2d799bc -> 48070b0)

2017-08-08 Thread Michael Crusoe
This is an automated email from the git hooks/post-receive script. misterc-guest pushed a change to branch master in repository python-schema-salad. from 2d799bc generate additional manpage adds 48070b0 fix broken manual pages No new revisions were added by this update.

[med-svn] [python-schema-salad] tag debian/2.6.20170630075932-2 created (now 48070b0)

2017-08-08 Thread Michael Crusoe
This is an automated email from the git hooks/post-receive script. misterc-guest pushed a change to tag debian/2.6.20170630075932-2 in repository python-schema-salad. at 48070b0 (commit) This tag includes the following new commits: new 48070b0 fix broken manual pages The 1

[med-svn] [python-schema-salad] 01/01: fix broken manual pages

2017-08-08 Thread Michael Crusoe
This is an automated email from the git hooks/post-receive script. misterc-guest pushed a commit to tag debian/2.6.20170630075932-2 in repository python-schema-salad. commit 48070b0fc4f40d38e6a2a988e20423bb286b3c7d Author: Michael R. Crusoe Date: Tue Aug 8 07:54:34

[med-svn] [bcftools] 02/02: Update changelog

2017-08-08 Thread Afif Elghraoui
This is an automated email from the git hooks/post-receive script. afif pushed a commit to branch master in repository bcftools. commit 608f125011f3d275806598d0093526218dbfc9bf Author: Afif Elghraoui Date: Mon Aug 7 20:08:56 2017 -0400 Update changelog Remaining

[med-svn] [bcftools] branch master updated (93d477a -> 608f125)

2017-08-08 Thread Afif Elghraoui
This is an automated email from the git hooks/post-receive script. afif pushed a change to branch master in repository bcftools. from 93d477a Updated references to bio.tools, RRID, OMICtools new 0206c3d Update packaging for new build system new 608f125 Update

[med-svn] [jellyfish1] 01/02: Clarify long description

2017-08-08 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository jellyfish1. commit 2474f88393b46bfe02c0d391a53c0589c417be9e Author: Andreas Tille Date: Tue Aug 8 17:04:39 2017 +0200 Clarify long description ---

[med-svn] [jellyfish1] 02/02: Take over some enhancements from jellyfish 2 package

2017-08-08 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository jellyfish1. commit 588c6eefcbadc15f6b16bc5da72401933be32b44 Author: Andreas Tille Date: Tue Aug 8 17:11:23 2017 +0200 Take over some enhancements from

[med-svn] [sambamba] branch master updated (fb7ad35 -> c2d45ea)

2017-08-08 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch master in repository sambamba. from fb7ad35 Bump standards version: No changes needed new 337df4f Versioned Build-Depends new 3f3601e Fixed copyright file new

[med-svn] [sambamba] 03/03: Upload to unstable

2017-08-08 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository sambamba. commit c2d45ea2abe46d4e3efee855a201b28d6713b1cf Author: Andreas Tille Date: Tue Aug 8 17:20:17 2017 +0200 Upload to unstable ---

[med-svn] [sambamba] 01/03: Versioned Build-Depends

2017-08-08 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository sambamba. commit 337df4fa3197ff6116d6146fb25160d62ec497e6 Author: Andreas Tille Date: Tue Aug 8 16:31:43 2017 +0200 Versioned Build-Depends ---

[med-svn] [sambamba] 02/03: Fixed copyright file

2017-08-08 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository sambamba. commit 3f3601edef15ea648e2f3499fb4b9cec6e24a42b Author: Andreas Tille Date: Tue Aug 8 17:00:42 2017 +0200 Fixed copyright file ---

[med-svn] [bcftools] 01/02: Update packaging for new build system

2017-08-08 Thread Afif Elghraoui
This is an automated email from the git hooks/post-receive script. afif pushed a commit to branch master in repository bcftools. commit 0206c3d81e695291f17b780e77e671f95e36860b Author: Afif Elghraoui Date: Mon Aug 7 20:09:34 2017 -0400 Update packaging for new build

[med-svn] [jellyfish1] branch master updated (06fa4f1 -> 588c6ee)

2017-08-08 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch master in repository jellyfish1. from 06fa4f1 Rename manpage, do not install copy of PDF doc - this is just a predependency for kraken - users should rather use jellyfish version 2

[med-svn] [trimmomatic] tag debian/0.36+dfsg-3 created (now 72c1e85)

2017-08-08 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to tag debian/0.36+dfsg-3 in repository trimmomatic. at 72c1e85 (commit) No new revisions were added by this update. -- Alioth's /usr/local/bin/git-commit-notice on

[med-svn] [jellyfish1] branch master updated (588c6ee -> 42632f6)

2017-08-08 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch master in repository jellyfish1. from 588c6ee Take over some enhancements from jellyfish 2 package new db645dd Update license new c6ff856 Add override new

[med-svn] [jellyfish1] 04/04: Upload to new

2017-08-08 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository jellyfish1. commit 42632f6742d62204c0678f448ead6e0d2b80d82a Author: Andreas Tille Date: Tue Aug 8 18:06:13 2017 +0200 Upload to new ---

[med-svn] [jellyfish1] 02/04: Add override

2017-08-08 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository jellyfish1. commit c6ff8561db2b23ab5b52c5d73ac5a96d00ec7b6e Author: Andreas Tille Date: Tue Aug 8 17:56:49 2017 +0200 Add override ---

[med-svn] [jellyfish1] 01/04: Update license

2017-08-08 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository jellyfish1. commit db645dd62f64f38ac5b4e802ded3ff26c6381fa9 Author: Andreas Tille Date: Tue Aug 8 17:53:11 2017 +0200 Update license ---

[med-svn] [jellyfish1] 03/04: DEP3

2017-08-08 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository jellyfish1. commit 3f6012f0d23e13b2626ea42e962ec58e20f9e88f Author: Andreas Tille Date: Tue Aug 8 18:02:37 2017 +0200 DEP3 --- debian/patches/man | 6

[med-svn] [bamtools] branch master updated (9399368 -> 16dcfcd)

2017-08-08 Thread Afif Elghraoui
This is an automated email from the git hooks/post-receive script. afif pushed a change to branch master in repository bamtools. from 9399368 add autopkgtest test-suite new 4abfee3 d/changelog: Merge UNRELEASED entries new 13f616d debian/tests:

[med-svn] [bamtools] 02/04: debian/tests: s/ADTTMP/AUTOPKGTEST_TMP/g

2017-08-08 Thread Afif Elghraoui
This is an automated email from the git hooks/post-receive script. afif pushed a commit to branch master in repository bamtools. commit 13f616d97743bef73290f1b78fb32c1383e829e7 Author: Afif Elghraoui Date: Tue Aug 8 11:31:06 2017 -0400 debian/tests:

[med-svn] [bamtools] annotated tag debian/2.4.1+dfsg-2 created (now d7c75da)

2017-08-08 Thread Afif Elghraoui
This is an automated email from the git hooks/post-receive script. afif pushed a change to annotated tag debian/2.4.1+dfsg-2 in repository bamtools. at d7c75da (tag) tagging 16dcfcdb2eb2e2765f19a8d257dcdad00e201206 (commit) replaces upstream/2.4.1+dfsg tagged by Afif

[med-svn] [bamtools] 01/04: d/changelog: Merge UNRELEASED entries

2017-08-08 Thread Afif Elghraoui
This is an automated email from the git hooks/post-receive script. afif pushed a commit to branch master in repository bamtools. commit 4abfee3427b1fcf3653cb9c207b490f4118d8b05 Author: Afif Elghraoui Date: Tue Aug 8 11:25:00 2017 -0400 d/changelog: Merge UNRELEASED

[med-svn] [bamtools] 03/04: Remove unused lintian overrides

2017-08-08 Thread Afif Elghraoui
This is an automated email from the git hooks/post-receive script. afif pushed a commit to branch master in repository bamtools. commit c6cc161f32aaeff1a9a522f51d422bfd49f50398 Author: Afif Elghraoui Date: Tue Aug 8 12:17:26 2017 -0400 Remove unused lintian overrides ---

[med-svn] [bamtools] 04/04: releasing package bamtools version 2.4.1+dfsg-2

2017-08-08 Thread Afif Elghraoui
This is an automated email from the git hooks/post-receive script. afif pushed a commit to branch master in repository bamtools. commit 16dcfcdb2eb2e2765f19a8d257dcdad00e201206 Author: Afif Elghraoui Date: Tue Aug 8 12:20:12 2017 -0400 releasing package bamtools version