[med-svn] [libvcflib] branch master updated (ad8c19e -> 6a36ad5)

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch master in repository libvcflib. from ad8c19e Add wrapper new 7171eb9 Keep R files in source tree which are removed in upstream build otherwise new 51c7d11 Simple manpag

[med-svn] [libvcflib] 01/04: Keep R files in source tree which are removed in upstream build otherwise

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository libvcflib. commit 7171eb9d1b1859542affec57eb5ff0432bdb8839 Author: Andreas Tille Date: Fri Sep 16 09:18:27 2016 +0200 Keep R files in source tree which are removed in up

[med-svn] [libvcflib] 03/04: Install R files

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository libvcflib. commit aaee585676f5dff915699c331ca98a6af250b026 Author: Andreas Tille Date: Fri Sep 16 09:19:21 2016 +0200 Install R files --- debian/libvcflib-tools.install

[med-svn] [libvcflib] 02/04: Simple manpage for wrapper

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository libvcflib. commit 51c7d11c0b63d666231aadbc13587ad9b52984dd Author: Andreas Tille Date: Fri Sep 16 09:19:07 2016 +0200 Simple manpage for wrapper --- debian/manpages |

[med-svn] [libvcflib] 04/04: Fix permission of R files

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository libvcflib. commit 6a36ad56dc046dedcb464de9420f39aa8d4f8167 Author: Andreas Tille Date: Fri Sep 16 09:24:56 2016 +0200 Fix permission of R files --- debian/rules | 4 +++

[med-svn] [gasic] branch upstream updated (1e9230e -> ef2f8cf)

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch upstream in repository gasic. from 1e9230e Imported Upstream version 0.0.r18 new ef2f8cf New upstream version 0.0.r19 The 1 revisions listed above as "new" are entirely new to th

[med-svn] [gasic] branch pristine-tar updated (fe14f97 -> 496333d)

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch pristine-tar in repository gasic. from fe14f97 Fix pristine tar id for gasic_0.0.r18.orig.tar.xz new 496333d pristine-tar data for gasic_0.0.r19.orig.tar.xz The 1 revisions liste

[med-svn] [gasic] 01/01: New upstream version 0.0.r19

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch upstream in repository gasic. commit ef2f8cffd82ee9db26ca0e28decc97566f7e0a11 Author: Andreas Tille Date: Fri Sep 16 13:24:47 2016 +0200 New upstream version 0.0.r19 --- README

[med-svn] [gasic] 01/01: pristine-tar data for gasic_0.0.r19.orig.tar.xz

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch pristine-tar in repository gasic. commit 496333de0225a1d46e6a4a85ebc691630dffc721 Author: Andreas Tille Date: Fri Sep 16 13:24:47 2016 +0200 pristine-tar data for gasic_0.0.r19.orig.tar.xz -

[med-svn] [freebayes] branch master updated (acbc913 -> e8d9334)

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch master in repository freebayes. from acbc913 Document local workaround new 2536e2a Fix patches new 666d23f libvcflib is packaged now new 006847b Restore origin

[med-svn] [freebayes] 01/04: Fix patches

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository freebayes. commit 2536e2a59ec36df0a5c2f388e9acdc3c79ead2fa Author: Andreas Tille Date: Fri Sep 16 14:31:42 2016 +0200 Fix patches --- debian/patches/use_debian_packaged

[med-svn] [freebayes] 02/04: libvcflib is packaged now

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository freebayes. commit 666d23f3845ef8c5529c9f3b734885f6ac4eb6e7 Author: Andreas Tille Date: Fri Sep 16 14:32:09 2016 +0200 libvcflib is packaged now --- debian/changelog | 1

[med-svn] [freebayes] 03/04: Restore original Makefile

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository freebayes. commit 006847ba2897ada9faf7ed1a6eea47b8bd7ba5a2 Author: Andreas Tille Date: Fri Sep 16 14:34:05 2016 +0200 Restore original Makefile --- src/Makefile | 2 +-

[med-svn] [freebayes] 04/04: Do not try to git clone software that is available as package

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository freebayes. commit e8d9334cd316b24147c7d27799dfcb9ddf4ba8ac Author: Andreas Tille Date: Fri Sep 16 14:43:27 2016 +0200 Do not try to git clone software that is available

[med-svn] [vsearch] 01/03: Imported Upstream version 2.0.5

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository vsearch. commit fbd885dbb41daaeb76c8eabc8b38ca4537832d4b Author: Andreas Tille Date: Fri Sep 16 15:25:33 2016 +0200 Imported Upstream version 2.0.5 --- README.md

[med-svn] [vsearch] 02/03: Merge tag 'upstream/2.0.5'

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository vsearch. commit 981e9171815f98188d6cb5ba76292d37aac25870 Merge: ea73ed4 fbd885d Author: Andreas Tille Date: Fri Sep 16 15:25:35 2016 +0200 Merge tag 'upstream/2.0.5'

[med-svn] [vsearch] branch master updated (ea73ed4 -> 74d8038)

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch master in repository vsearch. from ea73ed4 wording in changelog new fbd885d Imported Upstream version 2.0.5 new 981e917 Merge tag 'upstream/2.0.5' new 74d8038

[med-svn] [vsearch] branch upstream updated (64c75fa -> fbd885d)

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch upstream in repository vsearch. from 64c75fa Imported Upstream version 2.0.3 new fbd885d Imported Upstream version 2.0.5 The 1 revisions listed above as "new" are entirely new to

[med-svn] [vsearch] 03/03: New upstream version

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository vsearch. commit 74d80384c4c80c451b04e44136da1a3d518b714d Author: Andreas Tille Date: Fri Sep 16 15:30:05 2016 +0200 New upstream version --- debian/changelog | 6 ++

[med-svn] [vsearch] 01/01: pristine-tar data for vsearch_2.0.5.orig.tar.gz

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch pristine-tar in repository vsearch. commit 91fb9e92fbb4c2396a3380a6d96216ec7b7b8efd Author: Andreas Tille Date: Fri Sep 16 15:25:34 2016 +0200 pristine-tar data for vsearch_2.0.5.orig.tar.gz

[med-svn] [vsearch] branch pristine-tar updated (c0c5fb4 -> 91fb9e9)

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch pristine-tar in repository vsearch. from c0c5fb4 pristine-tar data for vsearch_2.0.3.orig.tar.gz new 91fb9e9 pristine-tar data for vsearch_2.0.5.orig.tar.gz The 1 revisions liste

[med-svn] [libvcflib] 03/03: keep filevercmp.h

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository libvcflib. commit 48846c184210061ea0e575e42f1cf3daaeab7749 Author: Andreas Tille Date: Fri Sep 16 15:38:33 2016 +0200 keep filevercmp.h --- debian/rules | 1 + 1 file c

[med-svn] [libvcflib] branch master updated (6a36ad5 -> 48846c1)

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch master in repository libvcflib. from 6a36ad5 Fix permission of R files new 31e8ea4 Fix installation of header files new ebebd36 Add missing Depends new 48846c1

[med-svn] [libvcflib] 01/03: Fix installation of header files

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository libvcflib. commit 31e8ea4b7758c1a5526676a990b32439d6d5a7c9 Author: Andreas Tille Date: Fri Sep 16 15:10:41 2016 +0200 Fix installation of header files --- debian/rules

[med-svn] [libvcflib] 02/03: Add missing Depends

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository libvcflib. commit ebebd36d53e8a638a3e982939fd9cc66dbfbeb1a Author: Andreas Tille Date: Fri Sep 16 15:19:17 2016 +0200 Add missing Depends --- debian/control | 5 -

[med-svn] [freebayes] branch master updated (e8d9334 -> 7c54e3a)

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch master in repository freebayes. from e8d9334 Do not try to git clone software that is available as package new 64c7c25 Make sure intervalltree header file will be found ne

[med-svn] [freebayes] 01/02: Make sure intervalltree header file will be found

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository freebayes. commit 64c7c25ee1edf164e01a6f50a626c9f53a191720 Author: Andreas Tille Date: Fri Sep 16 15:14:29 2016 +0200 Make sure intervalltree header file will be found -

[med-svn] [freebayes] 02/02: Make sure smithwatermann header will be found

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository freebayes. commit 7c54e3a4450f748a31d5ee7905b615a9d0414387 Author: Andreas Tille Date: Fri Sep 16 15:42:19 2016 +0200 Make sure smithwatermann header will be found ---

[med-svn] [libvcflib] branch master updated (48846c1 -> 44dfc63)

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch master in repository libvcflib. from 48846c1 keep filevercmp.h new 44dfc63 Upload to new The 1 revisions listed above as "new" are entirely new to this repository and will be des

[med-svn] [libvcflib] 01/01: Upload to new

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository libvcflib. commit 44dfc63695763bc73c5738113a4d27327c70ab71 Author: Andreas Tille Date: Fri Sep 16 15:52:45 2016 +0200 Upload to new --- debian/changelog | 7 +++ 1

[med-svn] r22808 - trunk/packages/R/r-bioc-biomformat/trunk/debian

2016-09-16 Thread Andreas Tille
Author: tille Date: 2016-09-16 20:19:49 + (Fri, 16 Sep 2016) New Revision: 22808 Modified: trunk/packages/R/r-bioc-biomformat/trunk/debian/copyright Log: Fix copyright Modified: trunk/packages/R/r-bioc-biomformat/trunk/debian/copyright =

[med-svn] r22809 - trunk/packages/R/r-bioc-biomformat/tags

2016-09-16 Thread Andreas Tille
Author: tille Date: 2016-09-16 20:20:41 + (Fri, 16 Sep 2016) New Revision: 22809 Removed: trunk/packages/R/r-bioc-biomformat/tags/1.0.2-1/ Log: Remove wrong tag ___ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http:/

[med-svn] [metaphlan2-data] annotated tag upstream/2.6.0+ds deleted (was ac58ca8)

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to annotated tag upstream/2.6.0+ds in repository metaphlan2-data. *** WARNING: tag upstream/2.6.0+ds was deleted! *** tag was ac58ca8 The revisions that were on this annotated tag are still contained in

[med-svn] [parsnp] tag debian/1.2+dfsg-1 created (now e3e6080)

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to tag debian/1.2+dfsg-1 in repository parsnp. at e3e6080 (commit) No new revisions were added by this update. -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/

[med-svn] [parsnp] 01/01: Add copyright statement at ftpmaster request

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository parsnp. commit 8a2e0f3f2c408f2edfc2b5c03e9eb4634d088006 Author: Andreas Tille Date: Fri Sep 16 23:18:58 2016 +0200 Add copyright statement at ftpmaster request --- debi

[med-svn] [parsnp] branch master updated (e3e6080 -> 8a2e0f3)

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch master in repository parsnp. from e3e6080 Fix standards version before uploading new 8a2e0f3 Add copyright statement at ftpmaster request The 1 revisions listed above as "new" ar

[med-svn] [metaphlan2-data] 03/04: New upstream version 2.6.0+ds

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository metaphlan2-data. commit 528a355a92f0df5b404893eebb1dd3e07db16134 Author: Andreas Tille Date: Fri Sep 16 22:40:30 2016 +0200 New upstream version 2.6.0+ds --- changeset.

[med-svn] [metaphlan2-data] 01/04: Fix homepage

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository metaphlan2-data. commit 3952fbb876a9519a3e23061e1f2271058fbfd9b0 Author: Andreas Tille Date: Fri Sep 16 22:02:05 2016 +0200 Fix homepage --- debian/control | 2 +- 1 fi

[med-svn] [metaphlan2-data] 02/04: Do not remove license file and changelog

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository metaphlan2-data. commit fd0f05ee0f24ac606e20974f00e80f364c51cbc8 Author: Andreas Tille Date: Fri Sep 16 22:10:51 2016 +0200 Do not remove license file and changelog ---

[med-svn] [metaphlan2-data] 04/04: Merge tag 'upstream/2.6.0+ds'

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository metaphlan2-data. commit 9216d3858a91c1d8f9cfb9a5c4654e3ab81926dc Merge: fd0f05e 528a355 Author: Andreas Tille Date: Fri Sep 16 23:00:14 2016 +0200 Merge tag 'upstream/2.

[med-svn] [metaphlan2-data] annotated tag upstream/2.6.0+ds created (now 197a2e3)

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to annotated tag upstream/2.6.0+ds in repository metaphlan2-data. at 197a2e3 (tag) tagging 528a355a92f0df5b404893eebb1dd3e07db16134 (commit) tagged by Andreas Tille on Fri Sep 16 23:

[med-svn] [metaphlan2-data] branch master updated (dc8fc37 -> 9216d38)

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch master in repository metaphlan2-data. from dc8fc37 Fix typo new 3952fbb Fix homepage new fd0f05e Do not remove license file and changelog new 528a355 New upstr

[med-svn] [metaphlan2-data] 01/01: pristine-tar data for metaphlan2-data_2.6.0+ds.orig.tar.xz

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch pristine-tar in repository metaphlan2-data. commit e9713d1d5cd22e96218925d9f03b473b77df1ab7 Author: Andreas Tille Date: Fri Sep 16 23:00:14 2016 +0200 pristine-tar data for metaphlan2-data_2

[med-svn] [metaphlan2-data] branch pristine-tar updated (7b5c7f4 -> e9713d1)

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch pristine-tar in repository metaphlan2-data. from 7b5c7f4 pristine-tar data for metaphlan2-data_2.6.0+ds.orig.tar.xz new e9713d1 pristine-tar data for metaphlan2-data_2.6.0+ds.orig

[med-svn] [metaphlan2-data] branch upstream updated (853e289 -> 528a355)

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch upstream in repository metaphlan2-data. from 853e289 Imported Upstream version 2.6.0+ds new 528a355 New upstream version 2.6.0+ds The 1 revisions listed above as "new" are entire

[med-svn] [libvcflib] branch master updated (44dfc63 -> b309853)

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch master in repository libvcflib. from 44dfc63 Upload to new new b309853 Add missing license statement requested by ftpmaster The 1 revisions listed above as "new" are entirely new

[med-svn] [libvcflib] 01/01: Add missing license statement requested by ftpmaster

2016-09-16 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository libvcflib. commit b30985334daf7a6ccc36905d1b6905b108aace3c Author: Andreas Tille Date: Sat Sep 17 00:21:06 2016 +0200 Add missing license statement requested by ftpmaste