[med-svn] [libbpp-phyl] branch master updated (8bf8321 -> 1d3c1e6)

2017-07-17 Thread Julien Dutheil
This is an automated email from the git hooks/post-receive script. jdutheil-guest pushed a change to branch master in repository libbpp-phyl. from 8bf8321 Patches improvements new da3a80d Increased timeout even more. new 1d3c1e6 Pack. version 9. The 2 revisions liste

[med-svn] [libbpp-phyl] 02/02: Pack. version 9.

2017-07-17 Thread Julien Dutheil
This is an automated email from the git hooks/post-receive script. jdutheil-guest pushed a commit to branch master in repository libbpp-phyl. commit 1d3c1e6b45019d337dc6ef232f13e52b9701ecdf Author: Julien Y. Dutheil Date: Mon Jul 17 09:25:37 2017 +0200 Pack. version 9. --- debian/changel

[med-svn] [libbpp-phyl] 01/02: Increased timeout even more.

2017-07-17 Thread Julien Dutheil
This is an automated email from the git hooks/post-receive script. jdutheil-guest pushed a commit to branch master in repository libbpp-phyl. commit da3a80d015354606a0de8ffe5498a15b85176c3f Author: Julien Y. Dutheil Date: Mon Jul 17 09:24:04 2017 +0200 Increased timeout even more. --- de

[med-svn] [libbpp-phyl] branch master updated (1d3c1e6 -> 85dac66)

2017-07-17 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch master in repository libbpp-phyl. from 1d3c1e6 Pack. version 9. new 85dac66 Close bug The 1 revisions listed above as "new" are entirely new to this repository and will be descri

[med-svn] [libbpp-phyl] tag debian/2.3.1-9 created (now 85dac66)

2017-07-17 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to tag debian/2.3.1-9 in repository libbpp-phyl. at 85dac66 (commit) No new revisions were added by this update. -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-me

[med-svn] [libbpp-phyl] 01/01: Close bug

2017-07-17 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository libbpp-phyl. commit 85dac66b6d72eb188563deeffe1ff9f27e137d60 Author: Andreas Tille Date: Mon Jul 17 09:57:03 2017 +0200 Close bug --- debian/changelog | 3 ++- 1 file c

[med-svn] [adapterremoval] 03/07: Updated version 2.2.1a from 'upstream/2.2.1a'

2017-07-17 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository adapterremoval. commit 190ea7f9f157e6b24e4f85c05041c4b639a48bcf Merge: c484317 39c5a9d Author: Andreas Tille Date: Mon Jul 17 12:56:56 2017 +0200 Updated version 2.2.1a

[med-svn] [adapterremoval] 05/07: Standards-Version: 4.0.0 (no changes needed)

2017-07-17 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository adapterremoval. commit b885e5e591480fc92a459b076b937a68060bdd3a Author: Andreas Tille Date: Mon Jul 17 13:00:34 2017 +0200 Standards-Version: 4.0.0 (no changes needed) -

[med-svn] [adapterremoval] branch master updated (3383df2 -> ded3172)

2017-07-17 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch master in repository adapterremoval. from 3383df2 Add missing header, upload to unstable new c484317 Enable letters in watch file expression new 39c5a9d New upstream ver

[med-svn] [adapterremoval] 02/07: New upstream version 2.2.1a

2017-07-17 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository adapterremoval. commit 39c5a9dcebe20cd7ba20acab56027dac115a453e Author: Andreas Tille Date: Mon Jul 17 12:56:55 2017 +0200 New upstream version 2.2.1a --- .travis.yml

[med-svn] [adapterremoval] 07/07: Upload to unstable

2017-07-17 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository adapterremoval. commit ded31724e17cc7e6d517344f87cf0addb6f25b81 Author: Andreas Tille Date: Mon Jul 17 13:14:11 2017 +0200 Upload to unstable --- debian/changelog | 4 +

[med-svn] [adapterremoval] branch pristine-tar updated (fc4bff2 -> e4e259c)

2017-07-17 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch pristine-tar in repository adapterremoval. from fc4bff2 pristine-tar data for adapterremoval_2.2.1.orig.tar.gz new e4e259c pristine-tar data for adapterremoval_2.2.1a.orig.tar.gz

[med-svn] [adapterremoval] branch upstream updated (b0e5931 -> 39c5a9d)

2017-07-17 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch upstream in repository adapterremoval. from b0e5931 New upstream version 2.2.1 new 39c5a9d New upstream version 2.2.1a The 1 revisions listed above as "new" are entirely new to t

[med-svn] [adapterremoval] 01/07: Enable letters in watch file expression

2017-07-17 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository adapterremoval. commit c484317b7c45b42ccd09946f5dd2320526c0c9bf Author: Andreas Tille Date: Mon Jul 17 12:56:34 2017 +0200 Enable letters in watch file expression --- d

[med-svn] [adapterremoval] annotated tag upstream/2.2.1a created (now 7bfac2a)

2017-07-17 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to annotated tag upstream/2.2.1a in repository adapterremoval. at 7bfac2a (tag) tagging 39c5a9dcebe20cd7ba20acab56027dac115a453e (commit) replaces upstream/2.2.1 tagged by Andreas Tille

[med-svn] [adapterremoval] 01/01: pristine-tar data for adapterremoval_2.2.1a.orig.tar.gz

2017-07-17 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch pristine-tar in repository adapterremoval. commit e4e259c117047ef582fc3a7cea81762bcf8c15c1 Author: Andreas Tille Date: Mon Jul 17 12:56:56 2017 +0200 pristine-tar data for adapterremoval_2.2

[med-svn] [adapterremoval] 06/07: use DEB_SOURCE

2017-07-17 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository adapterremoval. commit 8f25ab6ef60f9c6e8a9edcca0110e1780a0b6e0a Author: Andreas Tille Date: Mon Jul 17 13:01:53 2017 +0200 use DEB_SOURCE --- debian/changelog | 1 + de

[med-svn] [adapterremoval] tag debian/2.2.1a-1 created (now ded3172)

2017-07-17 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to tag debian/2.2.1a-1 in repository adapterremoval. at ded3172 (commit) No new revisions were added by this update. -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debia

[med-svn] [adapterremoval] 04/07: New upstream version

2017-07-17 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository adapterremoval. commit dc1ee7ae46155621f0df5d9a52a301eed43c4be2 Author: Andreas Tille Date: Mon Jul 17 12:59:19 2017 +0200 New upstream version --- debian/changelog

[med-svn] [bwa] 01/02: Drop debugging output

2017-07-17 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository bwa. commit 6bd929d4960029a9b6615bb0a3380fe12fae06c9 Author: Andreas Tille Date: Mon Jul 17 15:21:06 2017 +0200 Drop debugging output --- debian/patches/debug.patch | 3

[med-svn] [bwa] tag debian/0.7.15-5 created (now 8288f61)

2017-07-17 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to tag debian/0.7.15-5 in repository bwa. at 8288f61 (commit) No new revisions were added by this update. -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/bwa.g

[med-svn] [bwa] branch master updated (8a74ee9 -> 8288f61)

2017-07-17 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch master in repository bwa. from 8a74ee9 add patch with pringting of unsigned counts new 6bd929d Drop debugging output new 8288f61 Close bug and upload to unstable The 2

[med-svn] [bwa] 02/02: Close bug and upload to unstable

2017-07-17 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository bwa. commit 8288f614764035f795e5869037a93f2f824aea31 Author: Andreas Tille Date: Mon Jul 17 15:22:12 2017 +0200 Close bug and upload to unstable --- debian/changelog |

[med-svn] [htslib] branch debian/unstable updated (b8c5413 -> 485cda1)

2017-07-17 Thread Sascha Steinbiss
This is an automated email from the git hooks/post-receive script. satta pushed a change to branch debian/unstable in repository htslib. from b8c5413 Upload to unstable new 485cda1 fix FTBFS The 1 revisions listed above as "new" are entirely new to this repository and will be

[med-svn] [htslib] 01/01: fix FTBFS

2017-07-17 Thread Sascha Steinbiss
This is an automated email from the git hooks/post-receive script. satta pushed a commit to branch debian/unstable in repository htslib. commit 485cda1a9936c7edcc890c6b6dc3a76a90cd1f7b Author: Sascha Steinbiss Date: Mon Jul 17 18:54:57 2017 +0200 fix FTBFS --- debian/changelog | 8 ++

[med-svn] [htslib] annotated tag debian/1.4.1-3 created (now d5b4df5)

2017-07-17 Thread Sascha Steinbiss
This is an automated email from the git hooks/post-receive script. satta pushed a change to annotated tag debian/1.4.1-3 in repository htslib. at d5b4df5 (tag) tagging 485cda1a9936c7edcc890c6b6dc3a76a90cd1f7b (commit) replaces 1.4.1 tagged by Sascha Steinbiss on Mon J

[med-svn] [libbpp-seq] branch master updated (14c6cd1 -> 3894096)

2017-07-17 Thread Julien Dutheil
This is an automated email from the git hooks/post-receive script. jdutheil-guest pushed a change to branch master in repository libbpp-seq. from 14c6cd1 Upload to unstable new 3894096 Increased timeout threshold The 1 revisions listed above as "new" are entirely new to this r

[med-svn] [libbpp-seq] 01/01: Increased timeout threshold

2017-07-17 Thread Julien Dutheil
This is an automated email from the git hooks/post-receive script. jdutheil-guest pushed a commit to branch master in repository libbpp-seq. commit 3894096e649f0facfc9e72c27db84e1761602920 Author: Julien Y. Dutheil Date: Mon Jul 17 22:30:45 2017 +0200 Increased timeout threshold

[med-svn] [libbpp-seq-omics] 01/01: Fixed unit tests for more portability.

2017-07-17 Thread Julien Dutheil
This is an automated email from the git hooks/post-receive script. jdutheil-guest pushed a commit to branch master in repository libbpp-seq-omics. commit ba1b73625cbed0badaf8552815a7e983daa4e45a Author: Julien Y. Dutheil Date: Mon Jul 17 22:57:56 2017 +0200 Fixed unit tests for more porta

[med-svn] [libbpp-seq-omics] branch master updated (70d6794 -> ba1b736)

2017-07-17 Thread Julien Dutheil
This is an automated email from the git hooks/post-receive script. jdutheil-guest pushed a change to branch master in repository libbpp-seq-omics. from 70d6794 Upload to unstable new ba1b736 Fixed unit tests for more portability. The 1 revisions listed above as "new" are entir

[med-svn] [htslib] 01/01: Fix FTBFS on s390x and sparc64

2017-07-17 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a commit to branch debian/unstable in repository htslib. commit 942393ba9a43828c3963dbde066b001dfe96440c Author: Graham Inggs Date: Tue Jul 18 00:54:22 2017 +0200 Fix FTBFS on s390x and sparc64 --- debian/ch

[med-svn] [htslib] branch debian/unstable updated (485cda1 -> 942393b)

2017-07-17 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a change to branch debian/unstable in repository htslib. from 485cda1 fix FTBFS new 942393b Fix FTBFS on s390x and sparc64 The 1 revisions listed above as "new" are entirely new to this repository

[med-svn] [htslib] annotated tag debian/1.4.1-4 created (now 634c4d3)

2017-07-17 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a change to annotated tag debian/1.4.1-4 in repository htslib. at 634c4d3 (tag) tagging 942393ba9a43828c3963dbde066b001dfe96440c (commit) replaces debian/1.4.1-3 tagged by Graham Inggs on

[med-svn] [adapterremoval] 02/03: Updated version 2.2.2 from 'upstream/2.2.2'

2017-07-17 Thread Kevin Murray
This is an automated email from the git hooks/post-receive script. daube-guest pushed a commit to branch master in repository adapterremoval. commit 869af39de31bc2fcf24f6f6a21d5f559ca825341 Merge: ded3172 663d195 Author: Kevin Murray Date: Tue Jul 18 09:37:40 2017 +1000 Updated version 2.

[med-svn] [adapterremoval] annotated tag upstream/2.2.2 created (now 26dea56)

2017-07-17 Thread Kevin Murray
This is an automated email from the git hooks/post-receive script. daube-guest pushed a change to annotated tag upstream/2.2.2 in repository adapterremoval. at 26dea56 (tag) tagging 663d1956708fb545a4e76bd9c6acf12fb01dc2ee (commit) replaces upstream/2.2.1a tagged by Kevin Murr

[med-svn] [adapterremoval] branch master updated (ded3172 -> d880162)

2017-07-17 Thread Kevin Murray
This is an automated email from the git hooks/post-receive script. daube-guest pushed a change to branch master in repository adapterremoval. from ded3172 Upload to unstable new 663d195 New upstream version 2.2.2 new 869af39 Updated version 2.2.2 from 'upstream/2.2.2'

[med-svn] [adapterremoval] 03/03: bump changelog, add myself to uploaders

2017-07-17 Thread Kevin Murray
This is an automated email from the git hooks/post-receive script. daube-guest pushed a commit to branch master in repository adapterremoval. commit d8801629250d85f5ab109cb0c1847295d3972469 Author: Kevin Murray Date: Tue Jul 18 09:37:51 2017 +1000 bump changelog, add myself to uploaders -

[med-svn] [adapterremoval] branch upstream updated (39c5a9d -> 663d195)

2017-07-17 Thread Kevin Murray
This is an automated email from the git hooks/post-receive script. daube-guest pushed a change to branch upstream in repository adapterremoval. from 39c5a9d New upstream version 2.2.1a new 663d195 New upstream version 2.2.2 The 1 revisions listed above as "new" are entirely ne

[med-svn] [adapterremoval] 01/03: New upstream version 2.2.2

2017-07-17 Thread Kevin Murray
This is an automated email from the git hooks/post-receive script. daube-guest pushed a commit to branch master in repository adapterremoval. commit 663d1956708fb545a4e76bd9c6acf12fb01dc2ee Author: Kevin Murray Date: Tue Jul 18 09:37:39 2017 +1000 New upstream version 2.2.2 --- .travis.y

[med-svn] [adapterremoval] 01/01: pristine-tar data for adapterremoval_2.2.2.orig.tar.gz

2017-07-17 Thread Kevin Murray
This is an automated email from the git hooks/post-receive script. daube-guest pushed a commit to branch pristine-tar in repository adapterremoval. commit 3751ed8f206b61404949719023ee257221a21b35 Author: Kevin Murray Date: Tue Jul 18 09:37:40 2017 +1000 pristine-tar data for adapterremova

[med-svn] [adapterremoval] branch pristine-tar updated (e4e259c -> 3751ed8)

2017-07-17 Thread Kevin Murray
This is an automated email from the git hooks/post-receive script. daube-guest pushed a change to branch pristine-tar in repository adapterremoval. from e4e259c pristine-tar data for adapterremoval_2.2.1a.orig.tar.gz new 3751ed8 pristine-tar data for adapterremoval_2.2.2.orig.t

[med-svn] [snakemake] branch master updated (54f4469 -> 7d85877)

2017-07-17 Thread Kevin Murray
This is an automated email from the git hooks/post-receive script. daube-guest pushed a change to branch master in repository snakemake. from 54f4469 Upload to unstable new 955a326 New upstream version 3.13.3 new 4cce424 Updated version 3.13.3 from 'upstream/3.13.3'

[med-svn] [snakemake] 02/05: Updated version 3.13.3 from 'upstream/3.13.3'

2017-07-17 Thread Kevin Murray
This is an automated email from the git hooks/post-receive script. daube-guest pushed a commit to branch master in repository snakemake. commit 4cce424a8bb76e90e8afbedfa6b4a9f8beb5b287 Merge: 54f4469 955a326 Author: Kevin Murray Date: Tue Jul 18 10:08:51 2017 +1000 Updated version 3.13.3

[med-svn] [snakemake] 03/05: bump changelog

2017-07-17 Thread Kevin Murray
This is an automated email from the git hooks/post-receive script. daube-guest pushed a commit to branch master in repository snakemake. commit faae86ab3d087bd33b04fd97d77e87427adf1242 Author: Kevin Murray Date: Tue Jul 18 10:14:59 2017 +1000 bump changelog --- debian/changelog | 6 +

[med-svn] [snakemake] 04/05: refresh patches

2017-07-17 Thread Kevin Murray
This is an automated email from the git hooks/post-receive script. daube-guest pushed a commit to branch master in repository snakemake. commit 31d58de1f34a59a112d93e5c8a78b12a58babb96 Author: Kevin Murray Date: Tue Jul 18 10:43:17 2017 +1000 refresh patches --- debian/patches/0003-Compa

[med-svn] [snakemake] 05/05: Add missing dependencies for newer snakemake

2017-07-17 Thread Kevin Murray
This is an automated email from the git hooks/post-receive script. daube-guest pushed a commit to branch master in repository snakemake. commit 7d858775eee3c26f288c4e95d916517da687f254 Author: Kevin Murray Date: Tue Jul 18 11:05:31 2017 +1000 Add missing dependencies for newer snakemake -

[med-svn] [libbpp-core] 01/02: Remove postinst scripts etc.

2017-07-17 Thread Julien Dutheil
This is an automated email from the git hooks/post-receive script. jdutheil-guest pushed a commit to branch master in repository libbpp-core. commit fdb0752bad3bd968284cbfbe1768cfb433f25cfb Author: Julien Y. Dutheil Date: Tue Jul 18 08:55:17 2017 +0200 Remove postinst scripts etc.

[med-svn] [libbpp-core] 02/02: Updated changelog.

2017-07-17 Thread Julien Dutheil
This is an automated email from the git hooks/post-receive script. jdutheil-guest pushed a commit to branch master in repository libbpp-core. commit 9aff808508db58d973a97dc2edd39d9b0d1069b9 Author: Julien Y. Dutheil Date: Tue Jul 18 08:57:09 2017 +0200 Updated changelog. --- debian/chang

[med-svn] [libbpp-core] branch master updated (393c0b9 -> 9aff808)

2017-07-17 Thread Julien Dutheil
This is an automated email from the git hooks/post-receive script. jdutheil-guest pushed a change to branch master in repository libbpp-core. from 393c0b9 cmake files belong to /usr/lib/$(DEB_HOST_MULTIARCH) new fdb0752 Remove postinst scripts etc. new 9aff808 Updated

[med-svn] [libbpp-seq] branch master updated (3894096 -> 6c2c9d0)

2017-07-17 Thread Julien Dutheil
This is an automated email from the git hooks/post-receive script. jdutheil-guest pushed a change to branch master in repository libbpp-seq. from 3894096 Increased timeout threshold new 6c2c9d0 Removed postinst scripts etc. The 1 revisions listed above as "new" are entirely ne

[med-svn] [libbpp-seq] 01/01: Removed postinst scripts etc.

2017-07-17 Thread Julien Dutheil
This is an automated email from the git hooks/post-receive script. jdutheil-guest pushed a commit to branch master in repository libbpp-seq. commit 6c2c9d02c983a6a5b60237168630d64b082a747a Author: Julien Y. Dutheil Date: Tue Jul 18 08:58:26 2017 +0200 Removed postinst scripts etc. --- de