[med-svn] [Git][med-team/mrtrix3][master] 6 commits: remove debian/gbp.conf - salsa's versions of repo follows gbp

2020-05-20 Thread Yaroslav Halchenko
Yaroslav Halchenko pushed to branch master at Debian Med / mrtrix3 Commits: bac7cfeb by Yaroslav Halchenko at 2020-05-20T13:40:49-04:00 remove debian/gbp.conf - salsas versions of repo follows gbp - - - - - 7ffa552b by Yaroslav Halchenko at 2020-05-20T13:41:36-04:00 New upstream version 3.0.0

[med-svn] [Git][med-team/mrtrix3] Pushed new tag upstream/3.0.0

2020-05-20 Thread Yaroslav Halchenko
Yaroslav Halchenko pushed new tag upstream/3.0.0 at Debian Med / mrtrix3 -- View it on GitLab: https://salsa.debian.org/med-team/mrtrix3/-/tree/upstream/3.0.0 You're receiving this email because of your account on salsa.debian.org. ___

[med-svn] [Git][med-team/mrtrix3][pristine-tar] pristine-tar data for mrtrix3_3.0.0.orig.tar.gz

2020-05-20 Thread Yaroslav Halchenko
Yaroslav Halchenko pushed to branch pristine-tar at Debian Med / mrtrix3 Commits: da46ba81 by Yaroslav Halchenko at 2020-05-20T13:42:11-04:00 pristine-tar data for mrtrix3_3.0.0.orig.tar.gz - - - - - 2 changed files: - + mrtrix3_3.0.0.orig.tar.gz.delta - + mrtrix3_3.0.0.orig.tar.gz.id

[med-svn] [Git][med-team/mrtrix3][upstream] New upstream version 3.0.0

2020-05-20 Thread Yaroslav Halchenko
Yaroslav Halchenko pushed to branch upstream at Debian Med / mrtrix3 Commits: 7ffa552b by Yaroslav Halchenko at 2020-05-20T13:41:36-04:00 New upstream version 3.0.0 - - - - - 22 changed files: - + .github/ISSUE_TEMPLATE/bug_report.md - + .github/ISSUE_TEMPLATE/custom.md - +

[med-svn] [Git][med-team/bcalm][master] Overwrite upstream's simple_test with our fixed version, so we test with...

2020-05-20 Thread Andreas Tille
Andreas Tille pushed to branch master at Debian Med / bcalm Commits: c250317c by Andreas Tille at 2020-05-20T21:43:08+02:00 Overwrite upstreams simple_test with our fixed version, so we test with Python 3, again. And depend on it for the test - - - - - 3 changed files: -

[med-svn] [Git][med-team/staden-io-lib][master] New version.

2020-05-20 Thread Steffen Möller
Steffen Möller pushed to branch master at Debian Med / staden-io-lib Commits: b27ab65f by Steffen Moeller at 2020-05-21T00:31:14+02:00 New version. - - - - - 5 changed files: - debian/changelog - debian/control - debian/patches/series - + debian/patches/usedebianhtscodecs.patch -

[med-svn] [Git][med-team/staden-io-lib] Pushed new tag debian/1.14.12-1

2020-05-20 Thread Steffen Möller
Steffen Möller pushed new tag debian/1.14.12-1 at Debian Med / staden-io-lib -- View it on GitLab: https://salsa.debian.org/med-team/staden-io-lib/-/tree/debian/1.14.12-1 You're receiving this email because of your account on salsa.debian.org. ___

[med-svn] [Git][med-team/drop-seq][master] Make sure Debian JARs will be found

2020-05-20 Thread Andreas Tille
Andreas Tille pushed to branch master at Debian Med / drop-seq Commits: 0566b745 by Andreas Tille at 2020-05-20T22:02:49+02:00 Make sure Debian JARs will be found - - - - - 2 changed files: - debian/patches/debian_packaged_libs.patch - debian/rules Changes:

[med-svn] [Git][med-team/drop-seq][master] TDOD: https://github.com/vkostyukov/la4j

2020-05-20 Thread Andreas Tille
Andreas Tille pushed to branch master at Debian Med / drop-seq Commits: f04c4ecb by Andreas Tille at 2020-05-21T06:14:27+02:00 TDOD: https://github.com/vkostyukov/la4j - - - - - 1 changed file: - debian/changelog Changes: = debian/changelog

[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

2020-05-20 Thread Andreas Tille
Andreas Tille pushed to branch master at Debian Med / community / helper-scripts Commits: c3cf15dd by Andreas Tille at 2020-05-21T01:45:35+00:00 automatic update - - - - - 2 changed files: - debian-med-tests.txt - outdated_med-packages.txt Changes: =

[med-svn] [Git][med-team/ncbi-vdb][master] Finalize ncbi-vdb 2.10.6+dfsg-2 for release to unstable.

2020-05-20 Thread Aaron M. Ucko
Aaron M. Ucko pushed to branch master at Debian Med / ncbi-vdb Commits: ef9c2dba by Aaron M. Ucko at 2020-05-20T22:13:26-04:00 Finalize ncbi-vdb 2.10.6+dfsg-2 for release to unstable. - - - - - 1 changed file: - debian/changelog Changes: =

[med-svn] [Git][med-team/sra-sdk] Pushed new tag debian/2.10.6+dfsg-1

2020-05-20 Thread Aaron M. Ucko
Aaron M. Ucko pushed new tag debian/2.10.6+dfsg-1 at Debian Med / sra-sdk -- View it on GitLab: https://salsa.debian.org/med-team/sra-sdk/-/tree/debian/2.10.6+dfsg-1 You're receiving this email because of your account on salsa.debian.org. ___

[med-svn] [Git][med-team/ncbi-vdb] Pushed new tag debian/2.10.6+dfsg-2

2020-05-20 Thread Aaron M. Ucko
Aaron M. Ucko pushed new tag debian/2.10.6+dfsg-2 at Debian Med / ncbi-vdb -- View it on GitLab: https://salsa.debian.org/med-team/ncbi-vdb/-/tree/debian/2.10.6+dfsg-2 You're receiving this email because of your account on salsa.debian.org. ___

[med-svn] [Git][med-team/drop-seq] Deleted tag upstream/2.3.0+dfsg

2020-05-20 Thread Andreas Tille
Andreas Tille deleted tag upstream/2.3.0+dfsg at Debian Med / drop-seq -- You're receiving this email because of your account on salsa.debian.org. ___ debian-med-commit mailing list debian-med-com...@alioth-lists.debian.net

[med-svn] [Git][med-team/bcalm][master] NMU upload to unstable

2020-05-20 Thread Andreas Tille
Andreas Tille pushed to branch master at Debian Med / bcalm Commits: 2a99c72d by Andreas Tille at 2020-05-21T05:32:07+02:00 NMU upload to unstable - - - - - 1 changed file: - debian/changelog Changes: = debian/changelog

[med-svn] [Git][med-team/drop-seq][upstream] New upstream version 2.3.0+dfsg

2020-05-20 Thread Andreas Tille
Andreas Tille pushed to branch upstream at Debian Med / drop-seq Commits: 2023c522 by Andreas Tille at 2020-05-21T07:07:21+02:00 New upstream version 2.3.0+dfsg - - - - - 6 changed files: - − .github/ISSUE_TEMPLATE/bug_report.md - − .github/ISSUE_TEMPLATE/documentation-request.md - −

[med-svn] [Git][med-team/drop-seq] Pushed new tag upstream/2.3.0+dfsg

2020-05-20 Thread Andreas Tille
Andreas Tille pushed new tag upstream/2.3.0+dfsg at Debian Med / drop-seq -- View it on GitLab: https://salsa.debian.org/med-team/drop-seq/-/tree/upstream/2.3.0+dfsg You're receiving this email because of your account on salsa.debian.org. ___

[med-svn] [Git][med-team/drop-seq][pristine-tar] pristine-tar data for drop-seq_2.3.0+dfsg.orig.tar.xz

2020-05-20 Thread Andreas Tille
Andreas Tille pushed to branch pristine-tar at Debian Med / drop-seq Commits: 49ddd17a by Andreas Tille at 2020-05-21T07:08:36+02:00 pristine-tar data for drop-seq_2.3.0+dfsg.orig.tar.xz - - - - - 2 changed files: - drop-seq_2.3.0+dfsg.orig.tar.xz.delta - drop-seq_2.3.0+dfsg.orig.tar.xz.id

[med-svn] [Git][med-team/drop-seq][master] 4 commits: libla4j-java is now packaged

2020-05-20 Thread Andreas Tille
Andreas Tille pushed to branch master at Debian Med / drop-seq Commits: 6ebd16c3 by Andreas Tille at 2020-05-21T07:02:13+02:00 libla4j-java is now packaged - - - - - 2023c522 by Andreas Tille at 2020-05-21T07:07:21+02:00 New upstream version 2.3.0+dfsg - - - - - 87ceae9c by Andreas Tille at

[med-svn] [Git][med-team/mmseqs2][master] Apply patch from Adrian Bunk to revert optimisation for i386

2020-05-20 Thread Andreas Tille
Andreas Tille pushed to branch master at Debian Med / mmseqs2 Commits: 8d13131c by Andreas Tille at 2020-05-20T08:35:16+02:00 Apply patch from Adrian Bunk to revert optimisation for i386 - - - - - 2 changed files: - debian/changelog - debian/rules Changes:

[med-svn] [Git][med-team/drop-seq][master] Work on Java build

2020-05-20 Thread Andreas Tille
Andreas Tille pushed to branch master at Debian Med / drop-seq Commits: e9afeca9 by Andreas Tille at 2020-05-20T12:52:54+02:00 Work on Java build - - - - - 5 changed files: - debian/control - + debian/patches/debian_packaged_libs.patch - + debian/patches/no_git.patch - +

[med-svn] [Git][med-team/drop-seq][master] Add libhtsjdk-java

2020-05-20 Thread Andreas Tille
Andreas Tille pushed to branch master at Debian Med / drop-seq Commits: f2d23826 by Andreas Tille at 2020-05-20T13:18:13+02:00 Add libhtsjdk-java - - - - - 2 changed files: - debian/control - debian/rules Changes: = debian/control