Andreas Tille pushed to branch master at Debian Med / cnvkit

Commits:
8059fff8 by Andreas Tille at 2018-08-13T10:57:39Z
New upstream version 0.9.5
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34ebc465 by Andreas Tille at 2018-08-13T10:59:13Z
Update upstream source from tag 'upstream/0.9.5'

Update to upstream version '0.9.5'
with Debian dir 0c2c88dc1d7f4efa894a0e7275969d3f2581509d
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8aee3a88 by Andreas Tille at 2018-08-13T10:59:13Z
New upstream version

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e77640f2 by Andreas Tille at 2018-08-13T10:59:13Z
debhelper 11

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8d0404a4 by Andreas Tille at 2018-08-13T10:59:17Z
Standards-Version: 4.2.0

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984c386f by Andreas Tille at 2018-08-13T11:02:19Z
refresh patches

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cbdb8372 by Andreas Tille at 2018-08-13T11:14:28Z
Upload to unstable

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30 changed files:

- .travis.yml
- LICENSE
- README.rst
- cnvlib/_version.py
- cnvlib/autobin.py
- cnvlib/cnary.py
- cnvlib/commands.py
- cnvlib/export.py
- cnvlib/import_rna.py
- cnvlib/reference.py
- cnvlib/rna.py
- cnvlib/segmentation/__init__.py
- cnvlib/segmetrics.py
- cnvlib/smoothing.py
- + cnvlib/ztest.py
- debian/changelog
- debian/compat
- debian/control
- debian/patches/python3compat.patch
- devtools/conda-recipe/meta.yaml
- doc/index.rst
- doc/pipeline.rst
- docker/Dockerfile
- scripts/cnv_annotate.py
- scripts/cnv_expression_correlate.py
- scripts/cnv_ztest.py
- + scripts/snpfilter.sh
- setup.py
- skgenome/gary.py
- skgenome/intersect.py


The diff was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/cnvkit/compare/079463032f42e52d77e5942a1ac91170a775dd1e...cbdb83725d409b684a549069f9a0445831220a67

-- 
View it on GitLab: 
https://salsa.debian.org/med-team/cnvkit/compare/079463032f42e52d77e5942a1ac91170a775dd1e...cbdb83725d409b684a549069f9a0445831220a67
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