Julien Y. Dutheil pushed to branch master at Debian Med / libbpp-phyl
Commits:
5afe4850 by Julien Y. Dutheil at 2018-02-11T21:18:30+01:00
Reduced test execution time.
Closesi: #890136
- - - - -
3 changed files:
- debian/changelog
- + debian/patches/reduce_test_time.patch
- debian/patches/series
Changes:
=====================================
debian/changelog
=====================================
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,10 @@
+libbpp-phyl (2.3.2-3) UNRELEASED; urgency=medium
+
+ * Reduced execution time of test_likelihood_nh
+ Closes: #890136
+
+ -- Julien Dutheil <julien.duth...@univ-montp2.fr> Fri, 09 Feb 2018 09:10:11
+0200
+
libbpp-phyl (2.3.2-2) unstable; urgency=medium
* Fixed covariant return type on 32bits arch.
=====================================
debian/patches/reduce_test_time.patch
=====================================
--- /dev/null
+++ b/debian/patches/reduce_test_time.patch
@@ -0,0 +1,13 @@
+diff --git a/test/test_likelihood_nh.cpp b/test/test_likelihood_nh.cpp
+index b4cd485..97431aa 100644
+--- a/test/test_likelihood_nh.cpp
++++ b/test/test_likelihood_nh.cpp
+@@ -89,7 +89,7 @@ int main() {
+ DiscreteDistribution* rdist = new GammaDiscreteRateDistribution(4, 1.0);
+
+ size_t nsites = 1000;
+- unsigned int nrep = 20;
++ unsigned int nrep = 3;
+ size_t nmodels = modelSet->getNumberOfModels();
+ vector<double> thetas(nmodels);
+ vector<double> thetasEst1(nmodels);
=====================================
debian/patches/series
=====================================
--- a/debian/patches/series
+++ b/debian/patches/series
@@ -1,3 +1,4 @@
unforce-cxxflags.patch
correct_constructors_inheritance.patch
fix_covariant_return.patch
+reduce_test_time.patch
View it on GitLab:
https://salsa.debian.org/med-team/libbpp-phyl/commit/5afe4850b42099c7d9d6f50213c9129a9335a7f3
---
View it on GitLab:
https://salsa.debian.org/med-team/libbpp-phyl/commit/5afe4850b42099c7d9d6f50213c9129a9335a7f3
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