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from 080d83f Use exact license wording from README new f9c46a1 Imported Upstream version 1.0+20160930 new e72c26a Merge tag 'upstream/1.0+20160930' new baaf30b Update name of README new d12b450 Update Standards-Version new 43605b3 Use encrypted protocols for VCS URLs new d4943ec Update email address and copyright years new 8c52c1a Drop manpages and refer to README for program documentation new 383b3ff Update patches new 56f9a34 Remove unnecessary lines from d/rules new 73040d5 releasing package dazzdb version 1.0+20160930-1 The 10 revisions listed above as "new" are entirely new to this repository and will be described in separate emails. The revisions listed as "adds" were already present in the repository and have only been added to this reference. Summary of changes: Catrack.c | 57 +-- DAM2fasta.c | 60 +-- DB.c | 284 ++++++++--- DB.h | 78 ++- DB2fasta.c | 108 ++-- DB2quiva.c | 97 ++-- DBshow.c => DBdump.c | 504 ++++++++++++------- DBdust.c | 39 +- DBrm.c | 37 -- DBshow.c | 55 +-- DBsplit.c | 68 +-- DBstats.c | 178 ++++--- DBupgrade.Dec.31.2014.c | 115 ----- DBupgrade.Sep.25.2014.c | 125 ----- DUSTupgrade.Jan.1.2015.c | 117 ----- LICENSE | 34 ++ Makefile | 28 +- QV.c | 93 ++-- QV.h | 55 +-- README | 442 ----------------- README.md | 501 +++++++++++++++++++ debian/changelog | 11 + debian/control | 9 +- debian/copyright | 4 +- debian/docs | 2 +- debian/man/Catrack.1.md | 22 - debian/man/DAM2fasta.1.md | 25 - debian/man/DB2fasta.1.md | 27 - debian/man/DB2quiva.1.md | 25 - debian/man/DBdust.1.md | 34 -- debian/man/DBrm.1.md | 21 - debian/man/DBshow.1.md | 48 -- debian/man/DBsplit.1.md | 30 -- debian/man/DBstats.1.md | 25 - debian/man/Makefile | 12 - debian/man/dazzdb.1 | 11 + debian/man/dsimulator.1.md | 39 -- debian/man/fasta2DAM.1.md | 24 - debian/man/fasta2DB.1.md | 28 -- debian/man/quiva2DB.1.md | 25 - .../patches/{append-cflags => append-cflags.patch} | 10 +- debian/patches/compiler-flags.patch | 65 +++ debian/patches/{destdir => destdir.patch} | 4 +- debian/patches/ldflags | 75 --- .../{rename-simulator => rename-simulator.patch} | 30 +- debian/patches/series | 8 +- debian/rules | 18 +- fasta2DAM.c | 477 +++++++++++++----- fasta2DB.c | 290 ++++++----- quiva2DB.c | 546 +++++++++++++-------- rangen.c | 182 +++++++ simulator.c | 473 +++++++++++------- 52 files changed, 2905 insertions(+), 2770 deletions(-) copy DBshow.c => DBdump.c (52%) delete mode 100644 DBupgrade.Dec.31.2014.c delete mode 100644 DBupgrade.Sep.25.2014.c delete mode 100644 DUSTupgrade.Jan.1.2015.c create mode 100644 LICENSE delete mode 100644 README create mode 100644 README.md delete mode 100644 debian/man/Catrack.1.md delete mode 100644 debian/man/DAM2fasta.1.md delete mode 100644 debian/man/DB2fasta.1.md delete mode 100644 debian/man/DB2quiva.1.md delete mode 100644 debian/man/DBdust.1.md delete mode 100644 debian/man/DBrm.1.md delete mode 100644 debian/man/DBshow.1.md delete mode 100644 debian/man/DBsplit.1.md delete mode 100644 debian/man/DBstats.1.md delete mode 100644 debian/man/Makefile create mode 100644 debian/man/dazzdb.1 delete mode 100644 debian/man/dsimulator.1.md delete mode 100644 debian/man/fasta2DAM.1.md delete mode 100644 debian/man/fasta2DB.1.md delete mode 100644 debian/man/quiva2DB.1.md rename debian/patches/{append-cflags => append-cflags.patch} (56%) create mode 100644 debian/patches/compiler-flags.patch rename debian/patches/{destdir => destdir.patch} (89%) delete mode 100644 debian/patches/ldflags rename debian/patches/{rename-simulator => rename-simulator.patch} (53%) create mode 100644 rangen.c -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/dazzdb.git _______________________________________________ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit