Too many hands on MultiQC Fwd: Bug#925304: Acknowledgement (ITP: multiqc -- output gathering for RNA sequencing across tools and samples)

Hi Andreas, I just wanted to push when I ran into your packaging :o/ Are you active on it? I would otherwise fiddle with it here and there. Best, Steffen Forwarded Message Subject:Bug#925304: Acknowledgement (ITP: multiqc -- output gathering for RNA sequencing

Re: Too many hands on MultiQC Fwd: Bug#925304: Acknowledgement (ITP: multiqc -- output gathering for RNA sequencing across tools and samples)

On Fri, Mar 22, 2019 at 11:48:10PM +0100, Steffen Möller wrote: > I just wanted to push when I ran into your packaging :o/ Are you active > on it? I just commited my latest status. The test suite is not running and my attempt to fix it does not work. Good luck with it. > I would otherwise

Re: Too many hands on MultiQC Fwd: Bug#925304: Acknowledgement (ITP: multiqc -- output gathering for RNA sequencing across tools and samples)

On 23.03.19 00:07, Andreas Tille wrote: > On Fri, Mar 22, 2019 at 11:48:10PM +0100, Steffen Möller wrote: >> I just wanted to push when I ran into your packaging :o/ Are you active >> on it? > I just commited my latest status. Modded and pushed back. > The test suite is not running and > my

Re: Something for MoM, outreachy? TODO for workflows Fwd: bcbio_1.1.3-1_amd64.changes ACCEPTED into unstable

On Thu, 2019-03-21 at 21:52 +0100, Andreas Tille wrote: > ChildIOException: > File/directory is a child to another output: > /home/andreas/debian-maintain/salsa/med- > team/0_prospective/kallisto/test/kallisto_out > /home/andreas/debian-maintain/salsa/med- >

Re: Outreachy current

On Wed, 20 Mar 2019 09:43:43 + Liubov Chuprikova wrote Hi Saira, Hi Liubov, I am glad to know there is a new potential Outreachy student! :-) me too :)  On Tue, 19 Mar 2019 at 09:13, Andreas Tille wrote: On Mon, Mar 18, 2019 at

Re: Something for MoM, outreachy? TODO for workflows Fwd: bcbio_1.1.3-1_amd64.changes ACCEPTED into unstable

Hi Stian, On Fri, Mar 22, 2019 at 09:18:22AM +, Stian Soiland-Reyes wrote: > On Thu, 2019-03-21 at 21:52 +0100, Andreas Tille wrote: > > ChildIOException: > > File/directory is a child to another output: > > /home/andreas/debian-maintain/salsa/med- > >

Re: Outreachy current

On Wed, 20 Mar 2019 10:35:36 + Andreas Tille wrote Hi Liubov, thanks a lot for your comments. I have no idea whether there is some point in making you an official co-mentor but if you see some advantage for you in adding you officially that would be perfectly fine for

Re: Outreachy current

Dear Saira, On Fri, Mar 22, 2019 at 10:06:47AM +, Saira Hussain wrote: > Is the best way to do everything for the internship (or general developing) > using a VM so that it is containerised and safe? In principle there is no reason to use a VM to develop Debian packages. I'm personally

Re: Outreachy current

On Fri, 22 Mar 2019 10:42:55 + Andreas Tille wrote Dear Saira, Hi Andreas! On Fri, Mar 22, 2019 at 10:06:47AM +, Saira Hussain wrote: > Is the best way to do everything for the internship (or general developing) > using a VM so that it is containerised and

Access to Salsa request

Hello everyone, My name is Valentin, I am currently working at the Institut Pasteur (France) with Hervé Ménager. We are studying the links between debian_med and bio.tools (https://bio.tools/) registries, following up on the work initiated with Steffen Moeller, Andreas Tille and Matus Kalas

Would like to contribute and get selected in GSoC in Continuous Integration for biological applications inside Debian

Hola Mentors, I am Manas Kashyap an undergrad at Amity University and i am applying for GSOC this year and would like to be selected under Debian in the above mentioned project. I have a past history of packaging and i know a little amount of packaging and has been working with packages for more

Re: Outreachy current

On Fri, 22 Mar 2019 11:21:58 + Saira Hussain wrote On Fri, 22 Mar 2019 10:42:55 + Andreas Tille wrote Dear Saira, Hi Andreas! Hello again! I am filling up my Outreachy application and there's a field where the timeline

Re: Access to Salsa request

Hi Valentin, On Fri, Mar 22, 2019 at 12:56:34PM +, Valentin MARCON wrote: > My name is Valentin, I am currently working at the Institut Pasteur (France) > with Hervé Ménager. > We are studying the links between debian_med and bio.tools > (https://bio.tools/) registries, following up on the

Re: Outreachy current

Dear Saira, On Fri, Mar 22, 2019 at 03:15:37PM +, Saira Hussain wrote: > I am filling up my Outreachy application and there's a field where the > timeline of the project should be discussed and specified with you :)  I admit I'm not very good in setting timelines for this kind of project.

Re: Outreachy current

Hello Saira , Today i had a word with Andreas , i wanted to know which bug you are currently working on , so i can work on any other bug as i am getting ready for GSoC 2019 Debian project . Thank you . Regards On Fri, Mar 22, 2019 at 10:20 PM Andreas Tille wrote: > Dear Saira, > > On Fri, Mar

Re: Requested reminder for Andreas: Put EDAM version into udd

Hi Steffen, On Thu, Mar 21, 2019 at 04:52:58PM +0100, Steffen Möller wrote: > Hi Andreas, > > On 10.03.19 18:13, Steffen Möller wrote: > > Many greetings from the Debian Med Sprint - Andreas sits next to me > > and asked for this reminder. This is also an opportunity to remind you > > all about