cmake issue in libsbml: Cannot generate java documentation, please specify the Java_JAVADOC_JAR.

2015-12-17 Thread Andreas Tille
Hi, I'm trying to fix libsbml bugs and while doing so upgrade to the latest upstream version. Since the original tarball needs to be stripped I moved the packaging from SVN to Git[1] (so please do not try debcheckout which does not lead to the latest packaging status). Unfortunately my attempt

Re: cmake issue in libsbml: Cannot generate java documentation, please specify the Java_JAVADOC_JAR.

2015-12-17 Thread Andreas Tille
Hi Kevin, On Thu, Dec 17, 2015 at 10:44:40PM +1100, Kevin Murray wrote: > > I have pushed a possible fix to the branch 'daube/possible-cmake-fix'. I am > not > sure of the overall effects, the build is taking ages on my laptop, but it > seems > to have fixed the immediate error. Thanks a lot

Re: cmake issue in libsbml: Cannot generate java documentation, please specify the Java_JAVADOC_JAR.

2015-12-17 Thread Gianfranco Costamagna
issue in libsbml: Cannot generate java documentation, please specify the Java_JAVADOC_JAR. A: "Debian Mentors List" <debian-mentors@lists.debian.org> Cc: "Debian Med Packaging Team" <debian-med-packag...@lists.alioth.debian.org>, "Ivo Maintz" <i..

Re: cmake issue in libsbml: Cannot generate java documentation, please specify the Java_JAVADOC_JAR.

2015-12-17 Thread Andreas Tille
lution to the problem. Comments? Kind regards Andreas. > > Gio 17/12/15, Andreas Tille <andr...@fam-tille.de> ha scritto: > > Oggetto: Re: cmake issue in libsbml: Cannot generate java documentation, > please specify the

Re: cmake issue in libsbml: Cannot generate java documentation, please specify the Java_JAVADOC_JAR.

2015-12-17 Thread Jakub Wilk
* Andreas Tille , 2015-12-17, 19:11: override_dh_auto_build: + if mount | grep "^proc " ; then echo "proc mounted - fine"; else mount proc /proc -t proc ; fi Well, you need root privileges to mount /proc, so doing it in debian/rules almost certainly won't work. If

Re: cmake issue in libsbml: Cannot generate java documentation, please specify the Java_JAVADOC_JAR.

2015-12-17 Thread Gianfranco Costamagna
I think a non mounted proc is a bug, so probably you should fix the autobuilders and your build environment? The other issue is because of perl transition started yesterday. I think things will be better in the next few days https://release.debian.org/transitions/html/perl.html In the meanwhile

Re: cmake issue in libsbml: Cannot generate java documentation, please specify the Java_JAVADOC_JAR.

2015-12-17 Thread Andreas Tille
Hi Jakub, On Thu, Dec 17, 2015 at 11:34:53PM +0100, Jakub Wilk wrote: > * Andreas Tille , 2015-12-17, 19:11: > >override_dh_auto_build: > >+ if mount | grep "^proc " ; then echo "proc mounted - fine"; else > >mount proc /proc -t proc ; fi > > Well, you need root