Re: No clue yet for building snakemake since there are two dirs in .pybuild

[Piotr Ożarowski, 2018-06-27] > [Stuart Prescott, 2018-06-26] > > > # ls -l /build/snakemake-5.1.5/.pybuild > > > total 8 > > > drwxr-xr-x 3 pbuilder pbuilder 4096 Jun 26 09:20 cpython3_3.6 > > > drwxr-xr-x 3 pbuilder pbuilder 4096 Jun 26 09:20 cpython3_3.6_snakemake > > > > > > and the latter

Re: No clue yet for building snakemake since there are two dirs in .pybuild

[Stuart Prescott, 2018-06-26] > > # ls -l /build/snakemake-5.1.5/.pybuild > > total 8 > > drwxr-xr-x 3 pbuilder pbuilder 4096 Jun 26 09:20 cpython3_3.6 > > drwxr-xr-x 3 pbuilder pbuilder 4096 Jun 26 09:20 cpython3_3.6_snakemake > > > > and the latter contains all the installed files while the

Re: No clue yet for building snakemake since there are two dirs in .pybuild

Hi Andreas, > "/build/snakemake-5.1.5/.pybuild/cpython3_3.6_snakemake/build/tests/tests.py", > line 22, in > raise Exception("snakemake not in PATH. For testing, install snakemake > with " > Exception: snakemake not in PATH. For testing, install snakemake with 'pip > install -e .'.

No clue yet for building snakemake since there are two dirs in .pybuild

Hi, meanwhile I upgraded snakemake to latest upstream in Salsa[1]. I keep on having trouble with building it: ... Building DAG of jobs... Using shell: /bin/bash Job counts: count jobs 1 1 1 Finished job 0. 1 of 1 steps (100%) done Complete log: