ros-common-msgs 1.12.6-3 MIGRATED to testing
FYI: The status of the ros-common-msgs source package in Debian's testing distribution has changed. Previous version: 1.12.6-2 Current version: 1.12.6-3 -- This email is automatically generated once a day. As the installation of new packages into testing happens multiple times a day you will receive later changes on the next day. See https://release.debian.org/testing-watch/ for more information. -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
statsmodels 0.8.0-7 MIGRATED to testing
FYI: The status of the statsmodels source package in Debian's testing distribution has changed. Previous version: 0.8.0-6 Current version: 0.8.0-7 -- This email is automatically generated once a day. As the installation of new packages into testing happens multiple times a day you will receive later changes on the next day. See https://release.debian.org/testing-watch/ for more information. -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
sagenb is marked for autoremoval from testing
sagenb 1.0.1+ds1-5 is marked for autoremoval from testing on 2018-08-09 It (build-)depends on packages with these RC bugs: 902464: flask-silk: FTBFS in buster/sid (failing tests) -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
ros-roslisp_1.9.21-3_source.changes ACCEPTED into unstable
Accepted: -BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Tue, 03 Jul 2018 23:14:29 +0200 Source: ros-roslisp Binary: roslisp Architecture: source Version: 1.9.21-3 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Jochen Sprickerhof Description: roslisp- Lisp client library for Robot OS Changes: ros-roslisp (1.9.21-3) unstable; urgency=medium . * Update dependencies Checksums-Sha1: a30121822399d1b1672bbbd6d4363a4f2319c657 2084 ros-roslisp_1.9.21-3.dsc 8f918151ad5113ca7abb24db4bb1586ec5f4880e 3976 ros-roslisp_1.9.21-3.debian.tar.xz 9eb070f4fd93a314afc2b9b08d101f923b70d68a 7458 ros-roslisp_1.9.21-3_source.buildinfo Checksums-Sha256: 1abf547dc0b1997e719d9730097420c39a2dd27786c16ee0ca1f98ed2208b3ea 2084 ros-roslisp_1.9.21-3.dsc 770c33bea610f0b0b0820fda1d4d5ddb8222e443d50e9aefce1139479d06f29b 3976 ros-roslisp_1.9.21-3.debian.tar.xz 57f6f40823ffd6f63d35765f951374dd068bdc6f2c86461450a0d0235580778c 7458 ros-roslisp_1.9.21-3_source.buildinfo Files: 7e752975d560ad284fc98921ce91 2084 lisp optional ros-roslisp_1.9.21-3.dsc 6b9784b02c59d0f73d9cb5cb0dc1c205 3976 lisp optional ros-roslisp_1.9.21-3.debian.tar.xz d2dc9d021ce8affbe71e702ac4982af0 7458 lisp optional ros-roslisp_1.9.21-3_source.buildinfo -BEGIN PGP SIGNATURE- iQJIBAEBCgAyFiEEc7KZy9TurdzAF+h6W//cwljmlDMFAls754MUHGpzcHJpY2tl QGRlYmlhbi5vcmcACgkQW//cwljmlDM9EA//WXe6Oc7a4NugWo6CHAvs48JDvZMg rJajb8XS8ggGXSjwcPmaJgVrEL3QWbS1g5TLiQ7EAmwNN17rkNi8o+oDV1UPq1R5 e6PSXeHjV7hq1AfhaWoax/N6QyluSQWkGIQ1LhRsUdfQP6VHR1RdtL4Lj56eP2/6 oK//jITXMpGBQE/V9vJh3jr6LNj2GOG7oT7+B2ifzRzhY3TQyVEe1ucPHxmZTSW3 1Cahot6hrYxy0VI3xTq9qOdf3LKfw2kz085rMRkbb0JmX0QFfxXZ5T0EuJMT3EFL M/YzBOjjG7ogWQFWpjYbVFnF9Lv1QqmIgwx2V58zrefg29HOJjc08ecJTXrOC0Kd WHQUKRH3pNdUmU4AfsYav2EpDmkZPE6vGAgRQiDx/OPJT+gW/n1HMtsxBFNZ/zFS WHyPPDN2lWYyLNpnV7jmay8iP4949Zck3qGbErl5QH0Qd8VC0pqfQTBSQ2dJ0eJi htzjU9VpR5tddCRB+8slXkvfipRYVH9AByimTsZZx+pU/nL/6uSJcMftqAEtzCAr klULhNU4EaNVqZldk1m19Di8pgdwW4DAsFcBGnBrsOeD+y4NqGo4bavplLYRyjw3 g1CmUm3XLpK4t3n+UVP6MKEz9kSgKUJScgYuUyYQaQv9nf05cz5VUcfrKQgdJh2A jUQ3KBmQj4T1NXE= =IuMz -END PGP SIGNATURE- Thank you for your contribution to Debian. -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Processing of ros-roslisp_1.9.21-3_source.changes
ros-roslisp_1.9.21-3_source.changes uploaded successfully to localhost along with the files: ros-roslisp_1.9.21-3.dsc ros-roslisp_1.9.21-3.debian.tar.xz ros-roslisp_1.9.21-3_source.buildinfo Greetings, Your Debian queue daemon (running on host usper.debian.org) -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
med-fichier_3.3.1-4_source.changes ACCEPTED into experimental
Accepted: -BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Mon, 02 Jul 2018 23:24:52 +0200 Source: med-fichier Binary: libmed-dev libmed-doc libmed-tools libmed1v5 libmedc-dev libmedc1v5 libmedimport-dev libmedimport0v5 Architecture: source Version: 3.3.1-4 Distribution: experimental Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Gilles Filippini Description: libmed-dev - Development files for libmed libmed-doc - Documentation for the MED-fichier library libmed-tools - Runtime tools to handle MED files libmed1v5 - Library to exchange meshed data (Fortran version) libmedc-dev - Development files for libmedc libmedc1v5 - Library to exchange meshed data (C version) libmedimport-dev - Development files for libmedimport0 libmedimport0v5 - Library to import old version files Changes: med-fichier (3.3.1-4) experimental; urgency=medium . * libmedc-dev: install missing include files Checksums-Sha1: 11f3490ac67c900ec8eef6e5760514d18281fba8 2336 med-fichier_3.3.1-4.dsc a14b7031b392d4db1d3c527b377b49c5533c488c 37676 med-fichier_3.3.1-4.debian.tar.xz 30e5fe8e077a1556b90ca19a1348459d5a86b9d6 7410 med-fichier_3.3.1-4_source.buildinfo Checksums-Sha256: 483f43f84ea6484eb78ff47969f6bfa61afcbc08387ce7913b9f33cef6087a8a 2336 med-fichier_3.3.1-4.dsc 626b6599ea85ea7d07c42ad0230bda5ab78552631bb6120b277bac9ecaa36cba 37676 med-fichier_3.3.1-4.debian.tar.xz a668c631ffd229fae00d296ed926c6a87d35b40d4e263879ad848af6f3e6af00 7410 med-fichier_3.3.1-4_source.buildinfo Files: 07e7743eb4f90cac222b269ea77e2cdf 2336 libs optional med-fichier_3.3.1-4.dsc dec443d211ca25d6164bdcd191c4001e 37676 libs optional med-fichier_3.3.1-4.debian.tar.xz 1f5b42c8d0c7f7ba5c91ae8dfa00ed2d 7410 libs optional med-fichier_3.3.1-4_source.buildinfo -BEGIN PGP SIGNATURE- iQFEBAEBCgAuFiEEoJObzArDE05WtIyR7+hsbH/+z4MFAls7z2wQHHBpbmlAZGVi aWFuLm9yZwAKCRDv6Gxsf/7Pg4b9CACEysUzn2yzB7TMbOM8Bs8LQH8cgceuUlKO fvOP58L1fDErmBT85WSWOd9/6WUc1G8P64OeNoiHZtn2zR2b9uJs+aZ1y3bFoaTa aktWp0LzivzMGDQuIXaB1krbaWANUvKk6MRzvoYwVdzbeGwosRtayfQ/+aCMBHfD 0Xr9fBlkIeWvH6dGArdmNWYCJa2hWW6l+pN74VKPSbLDxGCfSjHFsmgH1sSPvbSJ 2s2RFOkzeWiNSXoLrfkdbGBBL7urIw1YtswRQUaGf3YYTZwkWFd/5vjKC30ZkXwr aD5hjuLxchjcOgZM6m5WtaB/vxciMUIOMD7BqG+K5G8ud4El/lJo =MfOV -END PGP SIGNATURE- Thank you for your contribution to Debian. -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Processing of med-fichier_3.3.1-4_source.changes
med-fichier_3.3.1-4_source.changes uploaded successfully to localhost along with the files: med-fichier_3.3.1-4.dsc med-fichier_3.3.1-4.debian.tar.xz med-fichier_3.3.1-4_source.buildinfo Greetings, Your Debian queue daemon (running on host usper.debian.org) -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#790196: Rasmol needs severe contribution to stay in Debian
On Tue, 2018-07-03 at 15:25 +0100, Carnë Draug wrote: > On 3 July 2018 at 14:59, Andreas Tille wrote: > > Hi, > > > > the bug log of #790196[1] shows that rasmol in its current state > > will > > not be distributable with Buster. Upstream is dead so if we want > > to > > keep it in Debian we have the option: > > > >1) Port it to Gtk+ 3 (see porting guide [2]) > >2) Find a Gtk+ 2 replacement for libvte > >3) Give up and remove this package from Debian > > > > ... > Maybe option 3 is not that bad. Debian also packages pymol which is > used even more [4] so it's not like rasmol users will be left without > an > alternative. I'd be joyful if someone kept rasmol alive. But viewmol is also an alternative which I've continued to find useful. Drew -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#790196: Rasmol needs severe contribution to stay in Debian
On 3 July 2018 at 14:59, Andreas Tille wrote: > Hi, > > the bug log of #790196[1] shows that rasmol in its current state will > not be distributable with Buster. Upstream is dead so if we want to > keep it in Debian we have the option: > >1) Port it to Gtk+ 3 (see porting guide [2]) >2) Find a Gtk+ 2 replacement for libvte >3) Give up and remove this package from Debian > > Since option 3 would be a shame for a package with quite some users[3] > (at least in the field of scientific software) I'm hereby making some > noise about this. My recent upload updates metadata (Salsa migration), > fixed all other bugs and most of the lintian issues. > > I'd be really happy if someone could spent some time into this > > Andreas. > > > [1] https://bugs.debian.org/790196 > [2] https://developer.gnome.org/gtk3/stable/gtk-migrating-2-to-3.html > [3] https://qa.debian.org/popcon.php?package=rasmol Maybe option 3 is not that bad. Debian also packages pymol which is used even more [4] so it's not like rasmol users will be left without an alternative. David [4] https://qa.debian.org/popcon.php?package=pymol -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#790196: Rasmol needs severe contribution to stay in Debian
Hi, the bug log of #790196[1] shows that rasmol in its current state will not be distributable with Buster. Upstream is dead so if we want to keep it in Debian we have the option: 1) Port it to Gtk+ 3 (see porting guide [2]) 2) Find a Gtk+ 2 replacement for libvte 3) Give up and remove this package from Debian Since option 3 would be a shame for a package with quite some users[3] (at least in the field of scientific software) I'm hereby making some noise about this. My recent upload updates metadata (Salsa migration), fixed all other bugs and most of the lintian issues. I'd be really happy if someone could spent some time into this Andreas. [1] https://bugs.debian.org/790196 [2] https://developer.gnome.org/gtk3/stable/gtk-migrating-2-to-3.html [3] https://qa.debian.org/popcon.php?package=rasmol -- http://fam-tille.de -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#902914: Arpack not working correctly
Package: libarpack2
Version: 3.6.1-1
Severity: Important
Hi arpack maintainer,
The present libarpack2 has a problem so that Julia 0.6.3 cannot
pass the tests as expected. I tried to dig out the cause but found nothing.
When we build arpack 3.3.0 with this makefile
https://github.com/JuliaLang/julia/blob/v0.6.3/deps/arpack.mk
everything is working.
Here are several ralted reports:
https://bugs.archlinux.org/task/58221
https://github.com/opencollab/arpack-ng/issues/30
https://github.com/JuliaLang/julia/issues/26830
Julia 0.6.3's test failure with libarpack2.
julia> Base.runtests(["linalg/arnoldi"])
Test (Worker) | Time (s) | GC (s) | GC % | Alloc (MB) | RSS (MB)
elty = Float64: Error During Test
Got an exception of type Base.LinAlg.ARPACKException outside of a @test
Base.LinAlg.ARPACKException("unexpected behavior")
Stacktrace:
[1] aupd_wrapper(::Type{T} where T,
::Base.LinAlg.#matvecA!#114{SparseMatrixCSC{Float64,Int64}},
::Base.LinAlg.##108#115, ::Base.LinAlg.##109#116, ::Int64, ::Bool, ::Bool,
::String, ::Int64, ::Int32, ::String, ::Float64, ::Int64, ::Int64,
::Array{Float64,1}) at ./linalg/arpack.jl:63
[2] #_eigs#107(::Int64, ::Int64, ::Symbol, ::Float64, ::Int64, ::Void,
::Array{Float64,1}, ::Bool, ::Base.LinAlg.#_eigs,
::SparseMatrixCSC{Float64,Int64}, ::UniformScaling{Int64}) at
./linalg/arnoldi.jl:285
[3] (::Base.LinAlg.#kw##_eigs)(::Array{Any,1}, ::Base.LinAlg.#_eigs,
::SparseMatrixCSC{Float64,Int64}, ::UniformScaling{Int64}) at ./:0
[4] #eigs#100 at ./linalg/arnoldi.jl:91 [inlined]
[5] (::Base.LinAlg.#kw##eigs)(::Array{Any,1}, ::Base.LinAlg.#eigs,
::SparseMatrixCSC{Float64,Int64}, ::UniformScaling{Int64}) at ./:0
[6] #eigs#99 at ./linalg/arnoldi.jl:90 [inlined]
[7] (::Base.LinAlg.#kw##eigs)(::Array{Any,1}, ::Base.LinAlg.#eigs,
::SparseMatrixCSC{Float64,Int64}) at ./:0
[8] macro expansion at /usr/share/julia/test/linalg/arnoldi.jl:33 [inlined]
[9] macro expansion at ./test.jl:921 [inlined]
[10] macro expansion at /usr/share/julia/test/linalg/arnoldi.jl:17 [inlined]
[11] macro expansion at ./test.jl:860 [inlined]
[12] anonymous at ./:?
[13] macro expansion at /usr/share/julia/test/testdefs.jl:18 [inlined]
[14] macro expansion at ./test.jl:860 [inlined]
[15] macro expansion at ./util.jl:378 [inlined]
[16] macro expansion at /usr/share/julia/test/testdefs.jl:17 [inlined]
[17] anonymous at ./:?
[18] runtests(::String, ::Bool) at /usr/share/julia/test/testdefs.jl:21
[19] (::Base.Distributed.##135#136{#runtests,Tuple{String},Array{Any,1}})()
at ./distributed/remotecall.jl:319
[20]
run_work_thunk(::Base.Distributed.##135#136{#runtests,Tuple{String},Array{Any,1}},
::Bool) at ./distributed/process_messages.jl:56
[21] #remotecall_fetch#140(::Array{Any,1}, ::Function, ::Function,
::Base.Distributed.LocalProcess, ::String, ::Vararg{String,N} where N) at
./distributed/remotecall.jl:344
[22] remotecall_fetch(::Function, ::Base.Distributed.LocalProcess, ::String,
::Vararg{String,N} where N) at ./distributed/remotecall.jl:344
[23] macro expansion at /usr/share/julia/test/runtests.jl:57 [inlined]
[24] (::##44#50)() at ./task.jl:335
elty = Complex{Float64}: Error During Test
Got an exception of type Base.LinAlg.ARPACKException outside of a @test
Base.LinAlg.ARPACKException("unexpected behavior")
Stacktrace:
[1] aupd_wrapper(::Type{T} where T,
::Base.LinAlg.#matvecA!#114{SparseMatrixCSC{Complex{Float64},Int64}},
::Base.LinAlg.##108#115, ::Base.LinAlg.##109#116, ::Int64, ::Bool, ::Bool,
::String, ::Int64, ::Int32, ::String, ::Float64, ::Int64, ::Int64,
::Array{Complex{Float64},1}) at ./linalg/arpack.jl:63
[2] #_eigs#107(::Int64, ::Int64, ::Symbol, ::Float64, ::Int64, ::Void,
::Array{Complex{Float64},1}, ::Bool, ::Base.LinAlg.#_eigs,
::SparseMatrixCSC{Complex{Float64},Int64}, ::UniformScaling{Int64}) at
./linalg/arnoldi.jl:285
[3] (::Base.LinAlg.#kw##_eigs)(::Array{Any,1}, ::Base.LinAlg.#_eigs,
::SparseMatrixCSC{Complex{Float64},Int64}, ::UniformScaling{Int64}) at
./:0
[4] #eigs#100 at ./linalg/arnoldi.jl:91 [inlined]
[5] (::Base.LinAlg.#kw##eigs)(::Array{Any,1}, ::Base.LinAlg.#eigs,
::SparseMatrixCSC{Complex{Float64},Int64}, ::UniformScaling{Int64}) at
./:0
[6] #eigs#99 at ./linalg/arnoldi.jl:90 [inlined]
[7] (::Base.LinAlg.#kw##eigs)(::Array{Any,1}, ::Base.LinAlg.#eigs,
::SparseMatrixCSC{Complex{Float64},Int64}) at ./:0
[8] macro expansion at /usr/share/julia/test/linalg/arnoldi.jl:33 [inlined]
[9] macro expansion at ./test.jl:921 [inlined]
[10] macro expansion at /usr/share/julia/test/linalg/arnoldi.jl:17 [inlined]
[11] macro expansion at ./test.jl:860 [inlined]
[12] anonymous at ./:?
[13] macro expansion at /usr/share/julia/test/testdefs.jl:18 [inlined]
[14] macro expansion at ./test.jl:860 [inlined]
[15] macro expansion at ./util.jl:378 [inlined]
[16] macro expansion at /usr/share/julia/test/testdefs.jl:17 [inlined]
[17] anonymous at ./:?
apertium-es-gl_1.0.8~r57542-3_amd64.changes ACCEPTED into unstable
Accepted: -BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 03 Jul 2018 12:40:38 +0530 Source: apertium-es-gl Binary: apertium-es-gl Architecture: source all Version: 1.0.8~r57542-3 Distribution: unstable Urgency: low Maintainer: Debian Science Team Changed-By: Kartik Mistry Description: apertium-es-gl - Apertium translation data for the Spanish-Galician pair Changes: apertium-es-gl (1.0.8~r57542-3) unstable; urgency=low . * debian/control: + Updated to Standards-Version 4.1.4 + Fixed Vcs-* URLs. + Updated Homepage. + Updated Depends. * Updated debian/copyright. * Updated debian/watch. * Updated dh to 11. Checksums-Sha1: cbe0205bc138df39be1a62f86752ab1ecd909f4a 2106 apertium-es-gl_1.0.8~r57542-3.dsc 5d989cbeb1f37e4fe7f599e29360a33c64548df1 2368 apertium-es-gl_1.0.8~r57542-3.debian.tar.xz 148a2d8834bc6837aa4b8ed2028414365d318d08 1766776 apertium-es-gl_1.0.8~r57542-3_all.deb 76057b10b53ce6b8c208e61c50aedec9f7569fdd 6936 apertium-es-gl_1.0.8~r57542-3_amd64.buildinfo Checksums-Sha256: 468121ca724c22c9411f3a1a4bf0ede9ef81ad3db970068c6025e8e7f6dc6169 2106 apertium-es-gl_1.0.8~r57542-3.dsc a22ebfa77a6f5bed14beefc4c99f9b464f2223034d210cdc9e7eb541add11573 2368 apertium-es-gl_1.0.8~r57542-3.debian.tar.xz 685c9715fb97d6e02226e51d74f7160bd6c7a115b61b2da52928e6dfaf936956 1766776 apertium-es-gl_1.0.8~r57542-3_all.deb e453fc520a0533103f35fc2a489840b7566f4a697e01b393ddf81dd3c06be738 6936 apertium-es-gl_1.0.8~r57542-3_amd64.buildinfo Files: 38881db180d45ee4540bd927dc4e15b9 2106 science optional apertium-es-gl_1.0.8~r57542-3.dsc 435103e618516ce71272da4d53eba9d0 2368 science optional apertium-es-gl_1.0.8~r57542-3.debian.tar.xz ba4f24294d1349296db0f3520e0b9f03 1766776 science optional apertium-es-gl_1.0.8~r57542-3_all.deb d3864a5efb36a38536ec84b51b6a9ed4 6936 science optional apertium-es-gl_1.0.8~r57542-3_amd64.buildinfo -BEGIN PGP SIGNATURE- iQIzBAEBCAAdFiEEa2MbXvVUr2sRlmKSAsHT8ng6pN4FAls7ZyUACgkQAsHT8ng6 pN7pnQ//TLNuzcKVeX/Le8J5uLHl5AyOUVa879zM9vTBoXY4141Xw1V2ClNhOomi 4zI3IUELiXJ5kAfLxZaXn+x98GykOg5lh/5GvgzHYzmwWcDEE88WzH/ZmczYUaK1 A+J213jwUH085ItxwYUBu7jrp4jx02hEf2hW+2R89TZzss4jO6sn7JqkWkRaEY0N ILF2PjjLEHGqt+CYITESWzLJ4OKFpmtsVrXEtpKX5tZ/mUqdYrC5dXB43AzceUkF MkCQFCcqjzHpG0yhC6sfEb9E4sccr5IrHmutPk20TKJVZBShu+AqvSgVozmYc4C8 jSKJg+Srd8rplaDKUMr1Lv0FaxXHqh8S2ikgT1tTKyNMsFOVR8oYnq8Ikgak1lab n2RyS8nMFDw1DMw6NrXlf3nOeqJvIbIEeZld+2Q8o1oIbACcVnWywDdfo6M7++tS V84YFI70AMdzeyNcyD4S9d1GHhdRv/IDDO/2o3uU69RL/cOE+UcWeORLgzla7fkU eCztJT03kjyBa3NvmqtfbZJ0Vy/So97+uVpIAP3jt/Fvu5Vcr3ZKmPYR4FdG1A4s 58t+6UcXyD3Ng43Oowzx0qaNDczNO/dE5u0Dn+kzPyMNBpb+KIF2cyJZ1Ap9uJAj 4UlhQ1KSvx0yq1z6866V9VHw7hi85db64ax2bRy0I2AgLvr9ViA= =lrO2 -END PGP SIGNATURE- Thank you for your contribution to Debian. -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Processing of apertium-es-gl_1.0.8~r57542-3_amd64.changes
apertium-es-gl_1.0.8~r57542-3_amd64.changes uploaded successfully to localhost along with the files: apertium-es-gl_1.0.8~r57542-3.dsc apertium-es-gl_1.0.8~r57542-3.debian.tar.xz apertium-es-gl_1.0.8~r57542-3_all.deb apertium-es-gl_1.0.8~r57542-3_amd64.buildinfo Greetings, Your Debian queue daemon (running on host usper.debian.org) -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#767296: marked as done (rasmol: ftbfs on ppc64el -- conflict with vector keyword)
Your message dated Tue, 03 Jul 2018 09:50:07 + with message-id and subject line Bug#767296: fixed in rasmol 2.7.5.2+dfsg-1 has caused the Debian Bug report #767296, regarding rasmol: ftbfs on ppc64el -- conflict with vector keyword to be marked as done. This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 767296: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=767296 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems --- Begin Message --- Source: rasmol Severity: normal Tags: patch User: debian-powe...@lists.debian.org Dear Maintainer, The package rasmol fails to build from source on ppc64el due to a conflict with gcc macro named vector. A way I found to undefine the macro and not messing with the actual source code was to do that by using the flag -Uvector through debian/rules itself. It can also be done by using #undef vector in Imakefile. The patch is attached. Thanks. Fernando -- System Information: Debian Release: jessie/sid APT prefers unstable APT policy: (500, 'unstable') Architecture: ppc64el (ppc64le) Kernel: Linux 3.16-trunk-powerpc64le (SMP w/32 CPU cores) Locale: LANG=C, LC_CTYPE=C (charmap=ANSI_X3.4-1968) Shell: /bin/sh linked to /bin/dash diff -Nru rasmol-2.7.5.2/debian/changelog rasmol-2.7.5.2/debian/changelog --- rasmol-2.7.5.2/debian/changelog 2013-05-27 15:34:44.0 + +++ rasmol-2.7.5.2/debian/changelog 2014-10-29 20:50:18.0 + @@ -1,3 +1,10 @@ +rasmol (2.7.5.2-2ppc64el1) UNRELEASED; urgency=medium + + * Undefined vector through -Uvector so the keyword does not conflict with the +gcc macro with the same name. + + -- Fernando Seiti Furusato Wed, 29 Oct 2014 20:48:53 + + rasmol (2.7.5.2-2) unstable; urgency=low [ Andreas Tille ] diff -Nru rasmol-2.7.5.2/debian/rules rasmol-2.7.5.2/debian/rules --- rasmol-2.7.5.2/debian/rules 2013-05-27 15:34:44.0 + +++ rasmol-2.7.5.2/debian/rules 2014-10-29 20:45:10.0 + @@ -8,7 +8,7 @@ src/rasmol-gtk: dh_testdir -rm -f x11-stamp - cd $(CURDIR)/src ; xmkmf -DGTKWIN ; cd $(CURDIR) + cd $(CURDIR)/src ; xmkmf '-DGTKWIN -Uvector' ; cd $(CURDIR) $(MAKE) -C src clean; $(MAKE) -C src mv src/rasmol src/rasmol-gtk @@ -16,7 +16,7 @@ build-x11: src/rasmol.8 src/rasmol.16 src/rasmol.32 x11-stamp: - cd $(CURDIR)/src ; xmkmf -DX11WIN ; cd $(CURDIR) + cd $(CURDIR)/src ; xmkmf '-DX11WIN -Uvector' ; cd $(CURDIR) touch $@ src/rasmol.8: x11-stamp --- End Message --- --- Begin Message --- Source: rasmol Source-Version: 2.7.5.2+dfsg-1 We believe that the bug you reported is fixed in the latest version of rasmol, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 767...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille (supplier of updated rasmol package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 03 Jul 2018 11:13:56 +0200 Source: rasmol Binary: rasmol rasmol-doc Architecture: source Version: 2.7.5.2+dfsg-1 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Andreas Tille Description: rasmol - visualization of biological macromolecules rasmol-doc - documentation for rasmol Closes: 767296 821023 Changes: rasmol (2.7.5.2+dfsg-1) unstable; urgency=medium . [ Andreas Tille ] * Team upload. * Moved debian/upstream to debian/upstream/metadata * Add Registration field to upstream metadata * cme fix dpkg-control; cme fix dpkg-copyright * debhelper 11 * Standards-Version: 4.1.4 * Point VCS fields to Salsa * Build-Depends: bash-completion * Remove unsafe symlinks and unneeded binaries from source tarball * Avoid privacy breach by keeping logo image locally * Fix maintainer address * Fix spelling issues . [ Fernando Seiti Furusato ] * Fix undefined vector through -Uvector so the keyword does not conflict with the gcc macro with the same name. Closes: #767296 . [ Laura Arjona Reina ] * Fix short descriptions Closes: #821023 Checksums-Sha1: 5d1008c6578025f7a08ea5095a747477b6ffcd23 2191 rasmol_2.7.5.2+dfsg-1.dsc 5c80402c25e48a61019ee62ffeb012860db1746f 8673280 rasmol_2.7.5.2+dfsg.orig.tar.xz
Bug#821023: marked as done (rasmol: Short descriptions should begin with lowercase)
Your message dated Tue, 03 Jul 2018 09:50:07 +
with message-id
and subject line Bug#821023: fixed in rasmol 2.7.5.2+dfsg-1
has caused the Debian Bug report #821023,
regarding rasmol: Short descriptions should begin with lowercase
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
821023: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=821023
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: rasmol
Severity: minor
Tags: l10n patch
Dear Maintainer,
Thanks for packaging rasmol
* What led up to the situation?
I was translating the package description of rasmol-doc into Spanish, and I
noticed the English original short description begins with Uppercase instead of
lowercase.
* What outcome did you expect instead?
As per https://www.debian.org/doc/manuals/developers-reference/ch06.en.html
#bpp-pkg-synopsis , begin the short description with lowercase.
I've cloned the git repo of rasmol and edited the control file, which includes
the description for both packages. I've changed into lowercase the initial
letter of the descriptions.
Then I git commit, and then git format-patch -1
Attached the patch.
I'm not a packager so I'm not sure if modifying this file is enough.
-- System Information:
Debian Release: 8.4
APT prefers stable-updates
APT policy: (500, 'stable-updates'), (500, 'stable')
Architecture: i386 (i686)
Kernel: Linux 3.16.0-4-686-pae (SMP w/2 CPU cores)
Locale: LANG=es_ES.UTF-8, LC_CTYPE=es_ES.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
>From 0c75f4aa990ad811d2516d38ba54de1afadbd41a Mon Sep 17 00:00:00 2001
From: Laura Arjona Reina
Date: Thu, 14 Apr 2016 19:20:28 +0200
Subject: [PATCH] Change to lowercase the initial letter of short description,
as per
https://www.debian.org/doc/manuals/developers-reference/ch06.en.html#bpp-pkg-synopsis
---
debian/control | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/debian/control b/debian/control
index d200040..848e211 100644
--- a/debian/control
+++ b/debian/control
@@ -16,7 +16,7 @@ Package: rasmol
Architecture: any
Depends: ${shlibs:Depends}, ${misc:Depends}
Suggests: rasmol-doc
-Description: Visualize biological macromolecules
+Description: visualize biological macromolecules
RasMol is a molecular graphics program intended for the visualisation of
proteins, nucleic acids and small molecules. The program is aimed at
display, teaching and generation of publication quality images.
@@ -42,7 +42,7 @@ Architecture: all
Section: doc
Depends: ${misc:Depends}
Enhances: rasmol
-Description: Documentation for rasmol
+Description: documentation for rasmol
Extra documentation for Rasmol, a program to visualize biological
macromolecules. Included are the Rasmol manual in various formats,
a command reference card and a copy of the openrasmol website,
--
2.1.4
--- End Message ---
--- Begin Message ---
Source: rasmol
Source-Version: 2.7.5.2+dfsg-1
We believe that the bug you reported is fixed in the latest version of
rasmol, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 821...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille (supplier of updated rasmol package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256
Format: 1.8
Date: Tue, 03 Jul 2018 11:13:56 +0200
Source: rasmol
Binary: rasmol rasmol-doc
Architecture: source
Version: 2.7.5.2+dfsg-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers
Changed-By: Andreas Tille
Description:
rasmol - visualization of biological macromolecules
rasmol-doc - documentation for rasmol
Closes: 767296 821023
Changes:
rasmol (2.7.5.2+dfsg-1) unstable; urgency=medium
.
[ Andreas Tille ]
* Team upload.
* Moved debian/upstream to debian/upstream/metadata
* Add Registration field to upstream metadata
* cme fix dpkg-control; cme fix dpkg-copyright
* debhelper 11
* Standards-Version: 4.1.4
* Point VCS fields to Salsa
* Build-Depends: bash-completion
* Remove unsafe symlinks and unneeded binaries from source tarball
* Avoid privacy breach by keeping
rasmol_2.7.5.2+dfsg-1_source.changes ACCEPTED into unstable
Accepted: -BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 03 Jul 2018 11:13:56 +0200 Source: rasmol Binary: rasmol rasmol-doc Architecture: source Version: 2.7.5.2+dfsg-1 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Andreas Tille Description: rasmol - visualization of biological macromolecules rasmol-doc - documentation for rasmol Closes: 767296 821023 Changes: rasmol (2.7.5.2+dfsg-1) unstable; urgency=medium . [ Andreas Tille ] * Team upload. * Moved debian/upstream to debian/upstream/metadata * Add Registration field to upstream metadata * cme fix dpkg-control; cme fix dpkg-copyright * debhelper 11 * Standards-Version: 4.1.4 * Point VCS fields to Salsa * Build-Depends: bash-completion * Remove unsafe symlinks and unneeded binaries from source tarball * Avoid privacy breach by keeping logo image locally * Fix maintainer address * Fix spelling issues . [ Fernando Seiti Furusato ] * Fix undefined vector through -Uvector so the keyword does not conflict with the gcc macro with the same name. Closes: #767296 . [ Laura Arjona Reina ] * Fix short descriptions Closes: #821023 Checksums-Sha1: 5d1008c6578025f7a08ea5095a747477b6ffcd23 2191 rasmol_2.7.5.2+dfsg-1.dsc 5c80402c25e48a61019ee62ffeb012860db1746f 8673280 rasmol_2.7.5.2+dfsg.orig.tar.xz 1797ee6b8d7dad99c341041470f6024c4303c67b 89572 rasmol_2.7.5.2+dfsg-1.debian.tar.xz Checksums-Sha256: 7b107ee5492a0bb60636f8c3cd63ca059e610d6e30ce40e383f831ecaa2b8afa 2191 rasmol_2.7.5.2+dfsg-1.dsc 69db6221c456fad8610f79b59181ffc36fc2b9cd0171dd0d710f150581f70348 8673280 rasmol_2.7.5.2+dfsg.orig.tar.xz 73f3f97b6416bdc602b18d7f24f416209268de17864623797c803de480bfd6bd 89572 rasmol_2.7.5.2+dfsg-1.debian.tar.xz Files: 85ccaf1e8036256cf1a1c2bacdd8f693 2191 science optional rasmol_2.7.5.2+dfsg-1.dsc 7638fec35c78dbad2a52ce7981576afd 8673280 science optional rasmol_2.7.5.2+dfsg.orig.tar.xz d285d5efc6d8feb6de05134a9491cb46 89572 science optional rasmol_2.7.5.2+dfsg-1.debian.tar.xz -BEGIN PGP SIGNATURE- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAls7QTsRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtGkqg//SdS4TOpz7te7vqKDrM+UZ2j+B+t4+CYo VpjJN/LPZ3uG3Yc/8BtueNcgPpNN31W9pNd9EOlcujxTydLRaCosGSJcbKbUPsXJ EdOnRGq3OxMWB4dA9uYUTYe0k63CGnJZAAzZ+gwdxRNMd6p9M0701XzVHrXiU9mC qZ5C9Xt6DDlWWQGIUfZzNVNpeOcpYiLMzYOmmNWL1K6mqQvDtIN35Os6VJ1+BMJr es5L1aFwYStdxBYCp+jt4PkvDqmIC1Yk9NwYFekTHro8VOgkxpkrvEEWHiMGA2h8 5Q+WUwwIRWiRJm7p9EQ3qlrmAvAzuAbcMX1hCQtw6gTXVZW64dc3zQU1QCU2Cu8r 6UbqYMT6UL8+FnAXOJEm35Az9v05h38rXkq0nHzQwpNANXAzoq9nDoCAC2dfApRr 0yX1Z23IpF0CwsPcAeA61dX9QCu3pmESQv+F1fA7Ojls35cgmrORI3G8tTAvTb9+ QrLSzJ2uAnwK7eNBmwbPJLzm5QdoDetYhC4H8MyD6YRH1CpEyuWIInqPhlBcz3qh biTEB0hv36cYs1kGKkKbKq8Kg2BdzQLxKqpiGwTjiQRR0mzM9l+tITR1tfgJNY6Y BIvQqBNuj0BRI4S5jBnuWZubTRXhbgWOMHKtZ2e4jVgHV7TmET/qemIW9XzvX9w8 EkQeHWyndyo= =cMYM -END PGP SIGNATURE- Thank you for your contribution to Debian. -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Processing of rasmol_2.7.5.2+dfsg-1_source.changes
rasmol_2.7.5.2+dfsg-1_source.changes uploaded successfully to localhost along with the files: rasmol_2.7.5.2+dfsg-1.dsc rasmol_2.7.5.2+dfsg.orig.tar.xz rasmol_2.7.5.2+dfsg-1.debian.tar.xz Greetings, Your Debian queue daemon (running on host usper.debian.org) -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
apertium-es-ast_1.1.0~r51165-2_amd64.changes ACCEPTED into unstable
Accepted: -BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 03 Jul 2018 11:17:09 +0530 Source: apertium-es-ast Binary: apertium-es-ast Architecture: source all Version: 1.1.0~r51165-2 Distribution: unstable Urgency: low Maintainer: Debian Science Team Changed-By: Kartik Mistry Description: apertium-es-ast - Apertium translation data for the Spanish-Asturian pair Changes: apertium-es-ast (1.1.0~r51165-2) unstable; urgency=low . * debian/control: + Updated Standards-Version to 4.1.4 + Updated Homepage. + Updated Vcs-* URLs. + Updated Depends. * Bumped dh to 11. * Updated debian/copyright. * Updated debian/watch. Checksums-Sha1: b8f2fe69bf2025e36504d8ec559ad6f2dbb9f7ca 2120 apertium-es-ast_1.1.0~r51165-2.dsc 68ca5c615c6e35d9cc151d87485c6f935bb5ab73 2172 apertium-es-ast_1.1.0~r51165-2.debian.tar.xz 1cc0b2488aa79eaf5236842b3b773ec6e9463555 1555468 apertium-es-ast_1.1.0~r51165-2_all.deb 8106d8dd3fa816cd88e2bc1288ae402dc386eb88 6945 apertium-es-ast_1.1.0~r51165-2_amd64.buildinfo Checksums-Sha256: 9705ef37b17c5250ba9fd599d4e5e88623d9c9b969d4d7b62179e86ca6543e99 2120 apertium-es-ast_1.1.0~r51165-2.dsc 2eda05cf20da2fb4eb9dac87269e0d59377d24c657c588d2515fd31e25881ed3 2172 apertium-es-ast_1.1.0~r51165-2.debian.tar.xz bb41d6b2a473527b68d98f26b044c9c38932a7198cd0b210dbcd43dda3a456f6 1555468 apertium-es-ast_1.1.0~r51165-2_all.deb a3e228776e60fad64360a35234dec61175b3b873b9baa40df88a354e4d87623e 6945 apertium-es-ast_1.1.0~r51165-2_amd64.buildinfo Files: 825a85efd3b0f23ee75245e24670d4c3 2120 science optional apertium-es-ast_1.1.0~r51165-2.dsc 9cb7e96ffcdfd88e785b29712e15ff5e 2172 science optional apertium-es-ast_1.1.0~r51165-2.debian.tar.xz 2ed86b80b939f556feb8c10254341408 1555468 science optional apertium-es-ast_1.1.0~r51165-2_all.deb 85961062a20b097d8bd56573dbeedb56 6945 science optional apertium-es-ast_1.1.0~r51165-2_amd64.buildinfo -BEGIN PGP SIGNATURE- iQIzBAEBCAAdFiEEa2MbXvVUr2sRlmKSAsHT8ng6pN4FAls7D6QACgkQAsHT8ng6 pN7+shAAuQbx2IMqRZJ2WtSeFQkuj9XTCm1hIe5nWLxd/Fer/kThbAtO/hHd9qDn hjc/oKpL4ApWvwgRKxMnM6A909tw5Nqy5jENYX8dB8sbiSQ1zUM5Bi7y6y1q+ruz BLVDXGbTnQJU8uMA5GYqKI3ixovyFsN+b0DAtr2ra9kAQjRBTSLRuHxVZBSPX9uW OBFmUI96L7rJ7nAFQXdW6A45vy24CwaZ7BfDJyKx0vRGOpHNl6KVllB2fkUWP81N jAl4DALxJNK6MhVFsfQoJSkoqQ0VDGojtlNQtvFUDFeS6IPI4qDoVp5Ehbm13TJd M1eHeigdADiAVSwSBc93HNqr6RldlreYKzv+DGS9FDRkgl487TEfjnGTbB99V6+v 2eVqtZA7KD4QjiLdQZEEmlRYlqFWizOxMkr/g744GtETNYOa/zjWUcdfoP+1reH+ l/aOUDJL50fdVfhFZyIPx3I+PH/d9cPrNLyi14Ww1NJCmO/mUPutJ3E/vEaPCXkL JAArWuwtBWuUiG/aZ8xs7uzTD2oBWN1oiQe2HZLJt0blllcxAIjjOXyoROt3wu6U Z3/h0EGTF96xwbJGDCvGf141nXb5vWBXnf5RkqO6v4sW9jgR4PLFK4RAMnUNd70A 9a5QvG7yYJrgDzaOEVlhY7PMWxidhtmcGMnGjbSRC4j2lbe5a8E= =tA9/ -END PGP SIGNATURE- Thank you for your contribution to Debian. -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Processing of apertium-es-ast_1.1.0~r51165-2_amd64.changes
apertium-es-ast_1.1.0~r51165-2_amd64.changes uploaded successfully to localhost along with the files: apertium-es-ast_1.1.0~r51165-2.dsc apertium-es-ast_1.1.0~r51165-2.debian.tar.xz apertium-es-ast_1.1.0~r51165-2_all.deb apertium-es-ast_1.1.0~r51165-2_amd64.buildinfo Greetings, Your Debian queue daemon (running on host usper.debian.org) -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
