vtk6 is marked for autoremoval from testing

vtk6 6.3.0+dfsg1-2 is marked for autoremoval from testing on 2017-01-13 It is affected by these RC bugs: 846372: vtk6: FTBFS: /<>/vtk6-6.3.0+dfsg1/ThirdParty/xdmf2/vtkxdmf2/libsrc/XdmfH5Driver.cxx:190:1: error: braces around scalar initializer for type ‘herr_t (*)(H5FD_t*) {aka int

esys-particle is marked for autoremoval from testing

esys-particle 2.3.4+dfsg1-3 is marked for autoremoval from testing on 2017-01-13 It (build-)depends on packages with these RC bugs: 846372: vtk6: FTBFS: /<>/vtk6-6.3.0+dfsg1/ThirdParty/xdmf2/vtkxdmf2/libsrc/XdmfH5Driver.cxx:190:1: error: braces around scalar initializer for type ‘herr_t

ros-pcl-conversions is marked for autoremoval from testing

ros-pcl-conversions 0.2.1-2 is marked for autoremoval from testing on 2017-01-13 It (build-)depends on packages with these RC bugs: 846372: vtk6: FTBFS: /<>/vtk6-6.3.0+dfsg1/ThirdParty/xdmf2/vtkxdmf2/libsrc/XdmfH5Driver.cxx:190:1: error: braces around scalar initializer for type ‘herr_t

vmtk is marked for autoremoval from testing

vmtk 1.3+dfsg-2 is marked for autoremoval from testing on 2017-01-13 It (build-)depends on packages with these RC bugs: 846372: vtk6: FTBFS: /<>/vtk6-6.3.0+dfsg1/ThirdParty/xdmf2/vtkxdmf2/libsrc/XdmfH5Driver.cxx:190:1: error: braces around scalar initializer for type ‘herr_t (*)(H5FD_t*) {aka

pcl is marked for autoremoval from testing

pcl 1.8.0+dfsg1-3 is marked for autoremoval from testing on 2017-01-13 It (build-)depends on packages with these RC bugs: 846372: vtk6: FTBFS: /<>/vtk6-6.3.0+dfsg1/ThirdParty/xdmf2/vtkxdmf2/libsrc/XdmfH5Driver.cxx:190:1: error: braces around scalar initializer for type ‘herr_t (*)(H5FD_t*)

paraview is marked for autoremoval from testing

paraview 5.1.2+dfsg1-1 is marked for autoremoval from testing on 2017-01-13 It (build-)depends on packages with these RC bugs: 846372: vtk6: FTBFS: /<>/vtk6-6.3.0+dfsg1/ThirdParty/xdmf2/vtkxdmf2/libsrc/XdmfH5Driver.cxx:190:1: error: braces around scalar initializer for type ‘herr_t

sfepy is marked for autoremoval from testing

sfepy 2016.2-2 is marked for autoremoval from testing on 2017-01-13 It (build-)depends on packages with these RC bugs: 846372: vtk6: FTBFS: /<>/vtk6-6.3.0+dfsg1/ThirdParty/xdmf2/vtkxdmf2/libsrc/XdmfH5Driver.cxx:190:1: error: braces around scalar initializer for type ‘herr_t (*)(H5FD_t*) {aka

fenics is marked for autoremoval from testing

fenics 1:1.5.0.1 is marked for autoremoval from testing on 2017-01-13 It (build-)depends on packages with these RC bugs: 846372: vtk6: FTBFS: /<>/vtk6-6.3.0+dfsg1/ThirdParty/xdmf2/vtkxdmf2/libsrc/XdmfH5Driver.cxx:190:1: error: braces around scalar initializer for type ‘herr_t (*)(H5FD_t*)

asl is marked for autoremoval from testing

asl 0.1.6-3 is marked for autoremoval from testing on 2017-01-13 It (build-)depends on packages with these RC bugs: 846372: vtk6: FTBFS: /<>/vtk6-6.3.0+dfsg1/ThirdParty/xdmf2/vtkxdmf2/libsrc/XdmfH5Driver.cxx:190:1: error: braces around scalar initializer for type ‘herr_t (*)(H5FD_t*) {aka

liggghts is marked for autoremoval from testing

liggghts 3.5.0+repack1-4 is marked for autoremoval from testing on 2017-01-13 It (build-)depends on packages with these RC bugs: 846372: vtk6: FTBFS: /<>/vtk6-6.3.0+dfsg1/ThirdParty/xdmf2/vtkxdmf2/libsrc/XdmfH5Driver.cxx:190:1: error: braces around scalar initializer for type ‘herr_t

woo is marked for autoremoval from testing

woo 1.0+dfsg1-1 is marked for autoremoval from testing on 2017-01-13 It (build-)depends on packages with these RC bugs: 846351: h5py: FTBFS: AttributeError: 'module' object has no attribute 'ACC_SWMR_READ' 846372: vtk6: FTBFS:

pyfai is marked for autoremoval from testing

pyfai 0.12.0+dfsg-5 is marked for autoremoval from testing on 2017-01-13 It (build-)depends on packages with these RC bugs: 846351: h5py: FTBFS: AttributeError: 'module' object has no attribute 'ACC_SWMR_READ' -- debian-science-maintainers mailing list

hdf-compass is marked for autoremoval from testing

hdf-compass 0.6.0-1 is marked for autoremoval from testing on 2017-01-13 It (build-)depends on packages with these RC bugs: 846351: h5py: FTBFS: AttributeError: 'module' object has no attribute 'ACC_SWMR_READ' -- debian-science-maintainers mailing list

pyfr is marked for autoremoval from testing

pyfr 1.5.0-1 is marked for autoremoval from testing on 2017-01-13 It (build-)depends on packages with these RC bugs: 846351: h5py: FTBFS: AttributeError: 'module' object has no attribute 'ACC_SWMR_READ' -- debian-science-maintainers mailing list

hydroffice.bag is marked for autoremoval from testing

hydroffice.bag 0.2.15-1 is marked for autoremoval from testing on 2017-01-13 It (build-)depends on packages with these RC bugs: 846351: h5py: FTBFS: AttributeError: 'module' object has no attribute 'ACC_SWMR_READ' -- debian-science-maintainers mailing list

dolfin is marked for autoremoval from testing

dolfin 2016.1.0-5 is marked for autoremoval from testing on 2017-01-13 It (build-)depends on packages with these RC bugs: 846372: vtk6: FTBFS: /<>/vtk6-6.3.0+dfsg1/ThirdParty/xdmf2/vtkxdmf2/libsrc/XdmfH5Driver.cxx:190:1: error: braces around scalar initializer for type ‘herr_t (*)(H5FD_t*)

xmds2 is marked for autoremoval from testing

xmds2 2.2.2+dfsg-2 is marked for autoremoval from testing on 2017-01-13 It (build-)depends on packages with these RC bugs: 846351: h5py: FTBFS: AttributeError: 'module' object has no attribute 'ACC_SWMR_READ' -- debian-science-maintainers mailing list

ssm is marked for autoremoval from testing

ssm 1.3-2.1 is marked for autoremoval from testing on 2016-12-22 It is affected by these RC bugs: 811973: ssm: FTBFS with GCC 6: symbol changes -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org

python-hdf5storage is marked for autoremoval from testing

python-hdf5storage 0.1.14-1 is marked for autoremoval from testing on 2017-01-13 It (build-)depends on packages with these RC bugs: 846351: h5py: FTBFS: AttributeError: 'module' object has no attribute 'ACC_SWMR_READ' -- debian-science-maintainers mailing list

h5py is marked for autoremoval from testing

h5py 2.6.0-1 is marked for autoremoval from testing on 2017-01-13 It is affected by these RC bugs: 846351: h5py: FTBFS: AttributeError: 'module' object has no attribute 'ACC_SWMR_READ' -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org

pytables_3.3.0-5_amd64.changes ACCEPTED into unstable

Accepted: -BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Wed, 07 Dec 2016 13:19:56 +0100 Source: pytables Binary: python-tables python-tables-lib python-tables-dbg python3-tables python3-tables-lib python3-tables-dbg python-tables-doc python-tables-data Architecture: source

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Processing of pytables_3.3.0-5_amd64.changes

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dune-pdelab_2.5.0~20161204gdb53a76-3_multi.changes ACCEPTED into unstable

Accepted: -BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Wed, 07 Dec 2016 22:36:38 +0100 Source: dune-pdelab Binary: libdune-pdelab-dev libdune-pdelab-doc Architecture: all amd64 source Version: 2.5.0~20161204gdb53a76-3 Distribution: unstable Urgency: medium Maintainer:

dune-grid-glue_2.5.0~20161206g666200e-2_multi.changes ACCEPTED into unstable

Accepted: -BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Wed, 07 Dec 2016 22:20:27 +0100 Source: dune-grid-glue Binary: libdune-grid-glue-dev libdune-grid-glue-dbg libdune-grid-glue-doc Architecture: all amd64 source Version: 2.5.0~20161206g666200e-2 Distribution: unstable

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maxima-sage_5.35.1-2_amd64.changes ACCEPTED into unstable, unstable

Accepted: -BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Mon, 05 Dec 2016 20:16:15 + Source: maxima-sage Binary: maxima-sage maxima-sage-doc maxima-sage-share Architecture: source amd64 all Version: 5.35.1-2 Distribution: unstable Urgency: medium Maintainer: Debian

sagenb_0.13+ds1-1_amd64.changes ACCEPTED into unstable, unstable

Accepted: -BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Tue, 06 Dec 2016 02:10:08 +0100 Source: sagenb Binary: python-sagenb Architecture: source all Version: 0.13+ds1-1 Distribution: unstable Urgency: low Maintainer: Debian Science Team

Bug#847172: marked as done (sagenb-export: FTBFS: UnicodeEncodeError: 'ascii' codec can't encode characters in position 41-42: ordinal not in range(128))

Your message dated Wed, 07 Dec 2016 21:07:35 + with message-id and subject line Bug#847172: fixed in sagenb-export 2.0-2 has caused the Debian Bug report #847172, regarding sagenb-export: FTBFS: UnicodeEncodeError: 'ascii' codec can't encode characters in

sagenb-export_2.0-2_amd64.changes ACCEPTED into unstable

Accepted: -BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Wed, 07 Dec 2016 20:44:45 +0100 Source: sagenb-export Binary: python-sagenb-export python3-sagenb-export Architecture: source all Version: 2.0-2 Distribution: unstable Urgency: medium Maintainer: Debian Science Team

Bug#847396: ignition-math2 FTBFS: unit tests fail on all 32bit architectures

Source: ignition-math2 Version: 2.5.0-2 Severity: serious https://buildd.debian.org/status/package.php?p=ignition-math2=sid Building seems to fail on all 32bit release architectures with one of: The following tests FAILED: 9 - UNIT_Helpers_TEST (Timeout) or The following tests

Processing of sagenb-export_2.0-2_amd64.changes

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Bug#844096: marked as done (gringo: please make the build reproducible)

Your message dated Wed, 07 Dec 2016 19:48:55 + with message-id and subject line Bug#844096: fixed in gringo 4.5.4-4 has caused the Debian Bug report #844096, regarding gringo: please make the build reproducible to be marked as done. This means that you

gringo_4.5.4-4_amd64.changes ACCEPTED into unstable

Accepted: -BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Wed, 07 Dec 2016 08:27:20 +0100 Source: gringo Binary: gringo Architecture: source amd64 Version: 4.5.4-4 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers

Bug#847172: sagenb-export: FTBFS: UnicodeEncodeError: 'ascii' codec can't encode characters in position 41-42: ordinal not in range(128)

Control: clone -1 -2 -3 Control: reassign -2 src:nbformat Control: retitle -2 Doesn't support non-UTF-8 filepaths Control: severity -2 normal Control: tags -2 + upstream Control: forwarded -2 https://github.com/jupyter/nbformat/issues/76 Control: retitle -3 Fails when LC_CTYPE is not explicitly

Processed: Re: Bug#847172: sagenb-export: FTBFS: UnicodeEncodeError: 'ascii' codec can't encode characters in position 41-42: ordinal not in range(128)

Processing control commands: > clone -1 -2 -3 Bug #847172 [src:sagenb-export] sagenb-export: FTBFS: UnicodeEncodeError: 'ascii' codec can't encode characters in position 41-42: ordinal not in range(128) Bug 847172 cloned as bugs 847393-847394 > reassign -2 src:nbformat Bug #847393

Processing of gringo_4.5.4-4_amd64.changes

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Bug#847172: sagenb-export: FTBFS: UnicodeEncodeError: 'ascii' codec can't encode characters in position 41-42: ordinal not in range(128)

I think I narrowed it down, could you try the build again with LC_CTYPE="C.UTF-8" and see how it works? X Chris Lamb: > Ximin Luo wrote: > >> I can't reproduce this, even when setting the locale to various non-UTF >> values > > Not sure why you were trying this specifically; I don't do

Bug#846512: ITP: dijitso -- distributed just-in-time building of shared libraries

Johannes Ring wrote: > > I have packaged dijitso locally but when I try to create a repository > at https://anonscm.debian.org/git/debian-science/packages/fenics/diji > tso.git > I get a permission denied error. I am trying to use `gbp > create-remote-repo`: > > I guess I don't have permissions

forge_0.9.0-2_source.changes ACCEPTED into unstable

Accepted: -BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 06 Dec 2016 19:37:43 + Source: forge Binary: libforge0 libforge-dev forge-doc Architecture: source Version: 0.9.0-2 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers

Processing of forge_0.9.0-2_source.changes

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ufl 2016.2.0-1 MIGRATED to testing

FYI: The status of the ufl source package in Debian's testing distribution has changed. Previous version: 2016.1.0-1 Current version: 2016.2.0-1 -- This email is automatically generated once a day. As the installation of new packages into testing happens multiple times a day you will

Bug#847172: sagenb-export: FTBFS: UnicodeEncodeError: 'ascii' codec can't encode characters in position 41-42: ordinal not in range(128)

Ximin Luo wrote: > I can't reproduce this, even when setting the locale to various non-UTF > values Not sure why you were trying this specifically; I don't do anything special by default — or I would mention it! — and build under en_GB.UTF-8 etc. (See the top of the full build log). If it

instant 2016.2.0-1 MIGRATED to testing

FYI: The status of the instant source package in Debian's testing distribution has changed. Previous version: 2016.1.0-1 Current version: 2016.2.0-1 -- This email is automatically generated once a day. As the installation of new packages into testing happens multiple times a day you will

libticables 1.3.4+dfsg-6 MIGRATED to testing

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linbox 1.4.2-3 MIGRATED to testing

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libticalcs 1.1.8+dfsg2-3 MIGRATED to testing

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maria 1.3.5-4.1 MIGRATED to testing

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fiat 2016.2.0-1 MIGRATED to testing

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Processing of glm_0.9.8.3-1_amd64.changes

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Bug#835406: trilinos: FTBFS on 32-bit architectures

Graham Inggs writes: > // Have assumed a 64bit build (8byte pointers) throughout the code base. That's annoying, though at least they clearly acknowledge it up front. > Amesos2, Ifpack2, Phalanx, Stokhos, Teko, Tpetra and Zoltan2 packages > which depend on Kokkos. Nico felt

Bug#845082: marked as done (numexpr FTBFS on ppc64el: test failures)

Your message dated Wed, 07 Dec 2016 15:05:48 + with message-id and subject line Bug#845082: fixed in numexpr 2.6.1-2 has caused the Debian Bug report #845082, regarding numexpr FTBFS on ppc64el: test failures to be marked as done. This means that you

numexpr_2.6.1-2_amd64.changes ACCEPTED into unstable

Accepted: -BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Wed, 30 Nov 2016 06:57:12 + Source: numexpr Binary: python-numexpr python-numexpr-dbg python3-numexpr python3-numexpr-dbg Architecture: source amd64 Version: 2.6.1-2 Distribution: unstable Urgency: high Maintainer:

Bug#847172: sagenb-export: FTBFS: UnicodeEncodeError: 'ascii' codec can't encode characters in position 41-42: ordinal not in range(128)

Hi Chris, I can't reproduce this, even when setting the locale to various non-UTF values. How are you building this? X Chris Lamb: > Source: sagenb-export > Version: 2.0-1 > Severity: serious > Justification: fails to build from source > User: reproducible-bui...@lists.alioth.debian.org >

Processing of numexpr_2.6.1-2_amd64.changes

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deal.ii_8.4.2-2_source.changes ACCEPTED into unstable

Accepted: -BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Wed, 07 Dec 2016 14:23:57 +0200 Source: deal.ii Binary: libdeal.ii-dev libdeal.ii-8.4.2 libdeal.ii-doc Architecture: source Version: 8.4.2-2 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers

Processing of deal.ii_8.4.2-2_source.changes

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Processed: trilinos: FTBFS on 32-bit architectures

Processing commands for cont...@bugs.debian.org: > tags 835406 - patch Bug #835406 [src:trilinos] trilinos: FTBFS on 32-bit architectures Bug #836130 [src:trilinos] trilinos: FTBFS without __sync_val_compare_and_swap_8 Removed tag(s) patch. Removed tag(s) patch. > thanks Stopping processing here.

Processed: trilinos: FTBFS on 32-bit architectures

Processing control commands: > tags -1 patch Bug #835406 [src:trilinos] trilinos: FTBFS on 32-bit architectures Ignoring request to alter tags of bug #835406 to the same tags previously set > merge -1 836130 Bug #835406 [src:trilinos] trilinos: FTBFS on 32-bit architectures Bug #835406

Bug#835406: trilinos: FTBFS on 32-bit architectures

Control: tags -1 patch Control: merge -1 836130 I've had another look at this after uploading 12.10.1. Upstream have added the following in packages/kokkos/core/src/Kokkos_Core_fwd.hpp: // // Have assumed a 64bit build