Package: libopencv2.4-java
Version: 2.4.8+dfsg1-2
Severity: grave
Justification: renders package unusable
-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256
Hi,
The symbolic links for the jar files in /usr/share/java are broken because
of a wrong version number (247 instead of 248):
drwxr-xr-x
tag 747500 patch
thanks
Hi,
Gilles Filippini a écrit , Le 09/05/2014 13:58:
Package: libopencv2.4-java
Version: 2.4.8+dfsg1-2
Severity: grave
Justification: renders package unusable
Hi,
The symbolic links for the jar files in /usr/share/java are broken because
of a wrong version
(closes: #747500)
+
+ -- Gilles Filippini p...@debian.org Wed, 21 May 2014 07:52:52 +0200
+
opencv (2.4.8+dfsg1-2.1) unstable; urgency=medium
* Non-maintainer upload.
diff -Nru opencv-2.4.8+dfsg1/debian/libopencv2.4-java.links
opencv-2.4.8+dfsg1/debian/libopencv2.4-java.links
--- opencv
Source: slepc
Version: 3.4.2.dfsg
Severity: normal
-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256
Hi,
While preparing the hdf5-8 transition I noticed that the source package
for slepc seems having a useless build dependency on HDF5:
slepc-3.4.2.dfsg$ grep -i hdf5
:49.0 +0200
@@ -1,3 +1,10 @@
+getdp (2.4.2-1.1) unstable; urgency=low
+
+ * Non-maintainer upload.
+ * Fix FTBFS with make 4 (closes: #747109).
+
+ -- Gilles Filippini p...@debian.org Fri, 25 Jul 2014 00:52:31 +0200
+
getdp (2.4.2-1) unstable; urgency=low
* Team upload
diff -Nru
+
+ * Non-maintainer upload.
+ * Added explicit build dependency on libhdf5-mpi-dev. It was
+previously pulled in by libslepc3.4.2-dev from which it should
+be removed (#755180).
+
+ -- Gilles Filippini p...@debian.org Mon, 28 Jul 2014 07:54:53 +0200
+
feel++ (1:0.98.0-final-1) unstable; urgency
2014-06-17 10:58:18.0 +0200
+++ flann-1.8.4/debian/changelog 2014-07-24 19:46:48.0 +0200
@@ -1,3 +1,11 @@
+flann (1.8.4-4.1) unstable; urgency=low
+
+ * Non-maintainer upload.
+ * New patch fix-cmake-hdf5.patch to support hdf5 1.8.13 new packaging
+layout.
+
+ -- Gilles
+layout.
+
+ -- Gilles Filippini p...@debian.org Fri, 25 Jul 2014 00:43:50 +0200
+
gmsh (2.8.4+dfsg-1) unstable; urgency=medium
* [09d4b69] Imported Upstream version 2.8.4+dfsg
diff -Nru gmsh-2.8.4+dfsg/debian/patches/fix-cmake-hdf5.patch gmsh-2.8.4+dfsg/debian/patches/fix-cmake-hdf5.patch
:11.0 +0200
+++ aster-11.5.0+dfsg2/debian/changelog 2014-07-24 14:46:25.0 +0200
@@ -1,3 +1,10 @@
+aster (11.5.0+dfsg2-2.1) UNRELEASED; urgency=low
+
+ * Non-maintainer upload.
+ * Support hdf5 1.8.13 new packaging layout.
+
+ -- Gilles Filippini p...@debian.org Thu, 24 Jul 2014 14
:45.0 +0200
+++ code-saturne-3.3.1/debian/changelog 2014-07-24 16:15:19.0 +0200
@@ -1,3 +1,10 @@
+code-saturne (3.3.1-1.1) unstable; urgency=low
+
+ * Non-maintainer upload.
+ * Support hdf5 1.8.13 new packaging layout.
+
+ -- Gilles Filippini p...@debian.org Thu, 24 Jul 2014 16:15
/changelog 2014-07-25 09:57:03.0 +0200
@@ -1,3 +1,11 @@
+jhdf (2.9-1.1) unstable; urgency=low
+
+ * Non-maintainer upload.
+ * Support hdf5 1.8.13 new packaging layout.
+ * Fix patch useSharedLib.diff to set correct HDF5 path via configure.
+
+ -- Gilles Filippini p...@debian.org Fri, 25
+0200
+++ libcgns-3.1.4.2/debian/changelog 2014-07-25 10:45:50.0 +0200
@@ -1,3 +1,10 @@
+libcgns (3.1.4.2-1.1) unstable; urgency=low
+
+ * Non-maintainer upload.
+ * Support hdf5 1.8.13 new packaging layout.
+
+ -- Gilles Filippini p...@debian.org Fri, 25 Jul 2014 10:45:50 +0200
+0200
+++ libmatio-1.5.2/debian/changelog 2014-07-25 11:36:19.0 +0200
@@ -1,3 +1,10 @@
+libmatio (1.5.2-2.1) unstable; urgency=low
+
+ * Non-maintainer upload.
+ * Support hdf5 1.8.13 new packaging layout.
+
+ -- Gilles Filippini p...@debian.org Fri, 25 Jul 2014 11:36:19 +0200
+
libmatio
:13.0 +0200
+++ med-fichier-3.0.6/debian/changelog 2014-07-25 13:15:05.0 +0200
@@ -1,3 +1,10 @@
+med-fichier (3.0.6-5.1) unstable; urgency=low
+
+ * Non-maintainer upload.
+ * Support hdf5 1.8.13 new packaging layout.
+
+ -- Gilles Filippini p...@debian.org Fri, 25 Jul 2014 13:15:05
-kernel-6.5.0/debian/changelog
@@ -1,3 +1,10 @@
+salome-kernel (6.5.0-8.1) unstable; urgency=low
+
+ * Non-maintainer upload.
+ * Support hdf5 1.8.13 new packaging layout.
+
+ -- Gilles Filippini p...@debian.org Sat, 26 Jul 2014 17:11:18 +0200
+
salome-kernel (6.5.0-8) unstable; urgency=low
* Fix
.
+
+ -- Gilles Filippini p...@debian.org Sat, 26 Jul 2014 18:38:24 +0200
+
scilab (5.5.0-2) unstable; urgency=medium
* Bring back the signal processing library (Don't know why it was missing)
diff -Nru scilab-5.5.0/debian/patches/m4-hdf5.patch scilab-5.5.0/debian/patches/m4-hdf5.patch
--- scilab-5.5.0
:41.0 +0200
+++ xmds2-2.2.0+dfsg1/debian/changelog 2014-07-26 20:14:09.0 +0200
@@ -1,3 +1,10 @@
+xmds2 (2.2.0+dfsg1-2.1) unstable; urgency=low
+
+ * Non-maintainer upload.
+ * Support hdf5 1.8.13 new packaging layout.
+
+ -- Gilles Filippini p...@debian.org Sat, 26 Jul 2014 20:14:09
:22.0 +0200
+++ yorick-hdf5-0.8.0/debian/changelog 2014-07-26 20:18:32.0 +0200
@@ -1,3 +1,10 @@
+yorick-hdf5 (0.8.0-4.1) unstable; urgency=low
+
+ * Non-maintainer upload.
+ * Support hdf5 1.8.13 new packaging layout.
+
+ -- Gilles Filippini p...@debian.org Sat, 26 Jul 2014 20:18:32
+++ mlpack-1.0.8/debian/changelog 2014-07-24 14:32:02.0 +0200
@@ -1,3 +1,10 @@
+mlpack (1.0.8-1.1) unstable; urgency=low
+
+ * Non-maintainer upload.
+ * Support hdf5 1.8.13 new packaging layout.
+
+ -- Gilles Filippini p...@debian.org Thu, 24 Jul 2014 14:31:55 +0200
+
mlpack (1.0.8-1
upload.
+ * Support hdf5 1.8.13 new packaging layout
+
+ -- Gilles Filippini p...@debian.org Thu, 24 Jul 2014 13:55:35 +0200
+
gnuplot-iostream (0~20130604.gitdd47c7a-1) unstable; urgency=low
* [642dade] Imported Upstream version 0~20130604.gitdd47c7a
diff -Nru gnuplot-iostream-0~20130604
: #756678).
+
+ -- Gilles Filippini p...@debian.org Wed, 06 Aug 2014 17:56:12 +0200
+
med-fichier (3.0.6-5) unstable; urgency=medium
* [e70adff] Fix autotests.
diff -Nru med-fichier-3.0.6/debian/rules med-fichier-3.0.6/debian/rules
--- med-fichier-3.0.6/debian/rules 2014-04-24 23:49
: #756690).
+
+ -- Gilles Filippini p...@debian.org Wed, 06 Aug 2014 18:00:31 +0200
+
petsc (3.4.2.dfsg1-8) unstable; urgency=medium
* Team upload.
diff -Nru petsc-3.4.2.dfsg1/debian/rules petsc-3.4.2.dfsg1/debian/rules
--- petsc-3.4.2.dfsg1/debian/rules 2014-03-04 21:09:33.0 +0100
.
Many thanks in advance,
_g.
On Tue, Jul 29, 2014 at 10:10 PM, Gilles Filippini p...@debian.org wrote:
Source: feel++
Version: 1:0.98.0-final-1
Severity: normal
Tags: patch
Hi,
The source package feel++ indirectly build-depends on libhdf5-mpi-dev
through libslepc3.4.2-dev
).
+
+ -- Gilles Filippini p...@debian.org Wed, 06 Aug 2014 19:41:52 +0200
+
mlpack (1.0.8-1) unstable; urgency=medium
* Initial release (closes: #660925, #743710)
diff -Nru mlpack-1.0.8/debian/rules mlpack-1.0.8/debian/rules
--- mlpack-1.0.8/debian/rules 2014-04-12 09:33:54.0 +0200
+++ mlpack
Hi,
On Tue, 5 Aug 2014 22:57:27 +0200 Sebastian Ramacher
sramac...@debian.org wrote:
Source: jhdf
Version: 2.9-2
Severity: serious
Justification: fails to build from source (but built successfully in the past)
jhdf wasn't expected to build on kfreebsd-* because of the versioned
Build-depends
Sebastian Ramacher a écrit , Le 13/08/2014 01:46:
Hi
On 2014-08-13 01:23:06, Gilles Filippini wrote:
On Tue, 5 Aug 2014 22:57:27 +0200 Sebastian Ramacher
sramac...@debian.org wrote:
Source: jhdf
Version: 2.9-2
Severity: serious
Justification: fails to build from source (but built
Control: usertag -1 HDF5-transition
Hi Antonio,
On Sun, 10 Aug 2014 08:09:54 +0200 Antonio Valentino
antonio.valent...@tiscali.it wrote:
The problem seems to be related to the lz4 compressor.
I am investigating it.
Any news about this bug? This is the last blocker for the upcoming HDF5
Source: code-saturne
Version: 3.3.2-2
Severity: serious
Justification: Policy 5.6.8
-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256
Yvan Fournier a écrit le 10/01/2015 17:40 : Hello,
There is a bug in the Debian packaging for Code_Saturne in Debian-sid,
but I was not able to find where in
CCing #801060 for the record.
Courriel original
Objet: Re: Bug#798256: transition: hdf5
Date: 2015-10-06 12:59
De: Gilles Filippini <p...@debian.org>
À: Emilio Pozuelo Monfort <po...@debian.org>
Cc: 798...@bugs.debian.org, Emilio Pozuelo Monfort <poch...@gmail.c
Source: freefem++
Version: 3.37.1-1
Severity: serious
Justification: The uploaded binary packages weren't built into a clean chroot,
causing an extra libhdf5-8 [amd64] dependency
-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256
Hi,
Trying to understand why freefem++ had 'Depends: libhdf5
Source: h5py
Version: 2.5.0-1
Severity: serious
Justification: FTBFS
-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256
Hi,
h5py now FTBFS because of a broken test:
==
FAIL: test_default (h5py.tests.old.test_file.TestFileOpen)
Control: unblock -1 by 791067
On Tue, 1 Sep 2015 23:02:18 +0100 Simon McVittie wrote:
> Source: flann
> Version: 1.8.4-4.1
> Severity: important
> Control: block -1 by 791067
>
> Background[1]: libstdc++6 introduces a new ABI to conform to the
> C++11 standard, but keeps the
On Mon, 07 Sep 2015 08:44:46 +0200 Gilles Filippini <p...@debian.org> wrote:
> Control: unblock -1 by 791067
>
> On Tue, 1 Sep 2015 23:02:18 +0100 Simon McVittie <s...@debian.org> wrote:
> > Source: flann
> > Version: 1.8.4-4.1
> > Severity: im
Control: severity -1 normal
Hi,
On Mon, 31 Aug 2015 00:06:23 +0200 Gilles Filippini <p...@debian.org> wrote:
> h5py now FTBFS because of a broken test:
>
> ==
> FAIL: test_default (h5py.tests.old.test
API changes:
+- xmlgraphics-commons-2.0.diff
+- fop-2.0.diff
+- batik-1.8.diff
+(closes: #800632).
+
+ -- Gilles Filippini <p...@debian.org> Sat, 03 Oct 2015 10:06:53 +0200
+
scilab (5.5.2-1) unstable; urgency=medium
* New upstream release
diff -Nru scilab-5.5.2/
Sylvestre Ledru a écrit le 03/10/2015 13:28 :
> No, go ahead, no need to wait :)
Ack.
Rescheduling to 0-day.
Thanks,
_g.
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debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
On Fri, 11 Sep 2015 16:40:40 +0200 Sylvestre Ledru
wrote:
> Jogl has to be updated too. I think there is a familiar patch for another
> arch.
No, this is gluegen2. And looking at the source I fail to see any
ppc64el support. Then, is there still a point for scilab to
.
+ * New patch: 0006-Fix-upstream-issue-481.patch
+Fix test suite errors such as 'ValueError: could not broadcast
+input array from shape (2) into shape (0)' (closes: #800466).
+
+ -- Gilles Filippini <p...@debian.org> Fri, 02 Oct 2015 20:01:01 +0200
+
pytables (3.2.1-1) unstable; u
Scott Kitterman a écrit le 02/10/2015 23:48 :
> On Friday, October 02, 2015 08:52:47 PM Gilles Filippini wrote:
>> Control: tags 800466 + patch
>> Control: tags 800466 + pending
>>
>> [Replace XX with correct value]
>> Dear maintainer,
>>
>> I've pre
On Tue, 29 Sep 2015 20:46:42 +0200 Gilles Filippini <p...@debian.org> wrote:
> Source: pytables
> Version: 3.2.1-1
> Severity: serious
> Justification: FTBFS
>
> -BEGIN PGP SIGNED MESSAGE-
> Hash: SHA256
>
> Hi,
>
> pytables FTBFS on a clean amd6
Package: libmpich-dev
Version: 3.2-1
Severity: grave
Justification: renders package unusable
Hi,
With this last release libmpich-dev doesn't provide
/usr/bin/mpif90.mpich anymore, causing FTBFSs (at least for hdf5).
Thanks,
_g.
-- System Information:
Debian Release: stretch/sid
APT prefers
r
<paul.bign...@gmail.com>, Gilles Filippini <p...@debian.org>
Hi,
Thanks for the information, this is fixed in the latest master branch :
- if (category == NULL || (lenCategory == 1 && *category == '\0'))
+ if (category == NULL || (lenCategory == 1 && **category == '\0'))
-
Source: med-fichier
Version: 3.0.6-11
Severity: grave
Justification: renders package unusable
Hi,
From the Salome Platform support forum [1]:
> Problems with Salome and Code Saturne in Debian
> Posted by Elektrix at January 03. 2017
>
> Hello all,
>
> I'm trying to set up a CFD case with
Control: tags -1 + patch
On 2017-02-14 14:37, Gilles Filippini wrote:
Source: med-fichier
Version: 3.0.6-11
Severity: grave
Justification: renders package unusable
Hi,
From the Salome Platform support forum [1]:
Problems with Salome and Code Saturne in Debian
Posted by Elektrix at January
On Wed, 15 Feb 2017 20:05:59 +0100 Anton Gladky wrote:
thanks for your effort on this bug, very appreciate. Unfortunately
the provided patch does not solve the problem. med-fichier still
fails on autopkgtests and unit tests. I have to remove the patch
tag.
I've received a patch from upstream
to fix FTBFS with
+HDF5 1.10
+
+ -- Gilles Filippini <p...@debian.org> Thu, 20 Oct 2016 21:59:50 +0200
+
med-fichier (3.0.6-10) unstable; urgency=medium
* [f6af4e3] Fix autopkgtest.
diff -Nru med-fichier-3.0.6/debian/patches/fix-fid-type-in-medequivinfo.patch med-fichier-3.0.6/debian/p
@@
+scilab (5.5.2-3) unstable; urgency=medium
+
+ * New patch to support HDF5-1.10
+
+ -- Gilles Filippini <p...@debian.org> Sat, 22 Oct 2016 15:54:20 +0200
+
scilab (5.5.2-2) unstable; urgency=medium
* Team upload.
diff -Nru scilab-5.5.2/debian/patches/hdf5-1.10-api.patch scilab-5.5.2/
Source: yorick-hdf5
Version: 0.8.0-5
Severity: important
-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256
Hi,
yorick-hdf5 FTBFS againt HDF5 v1.10 currently in experimental:
dh_auto_test
make -j1 check
make[1]: Entering directory '/<>'
/usr/lib/yorick/bin/yorick -batch check.i
On 2016-11-02 13:46, Thibaut Paumard wrote:
Le 02/11/2016 à 10:30, Gilles Filippini a écrit :
Yes, this plan (quick hack + temporarily disabling tests on other
archs) sounds sensible.
Dear Gilles,
I uploaded the hacked version(0.8.0-6) to experimental
(build-depending on hdf5-dev 1.10
Package: libmpich12
Version: 3.2-7
Severity: serious
Justification: make other packages FTBFS
-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256
Hi,
I've just experienced a weird FTBFS on hdf5 on my box, caused by an
extraneous symlink:
/usr/lib/libmpich.so.12 -> libmpi.so
Steps to reproduce:
1-
ow-up. I'm curious how you fix it, because as I
understand it, yorick doesn't support 64 bits integers o_O
Regards,
_g.
>
> Regards, Thibaut.
>
> Le 01/11/2016 à 14:16, Gilles Filippini a écrit :
>> Source: yorick-hdf5
>> Version: 0.8.0-5
>> Severity: important
>
Hi Thibaut,
On 2016-11-02 09:04, Thibaut Paumard wrote:
The "long" type is 64-bit on 64-bit arches. My quick hack works only
on these. The proper fix is more involving: I have to create a custom,
opaque data type that will hold the actual hid_t.
However, overloading the comparison operator for
Source: h5py
Version: 2.6.0-1
Severity: serious
Justification: FTBFS
-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256
Hi,
h5py FTBFS against hdf5-1.10 with:
==
ERROR: test_force_swmr_mode_off_raises
ian FTP archive.
[cut]
> Closes: 842817
> Changes:
> yorick-hdf5 (0.8.0-7) experimental; urgency=medium
> .
>* Bug fix: "FTBFS against HDF5 v1.10", thanks to Gilles Filippini
> (Closes: #842817).
>* Check against Policy 3.9.8.
Could you upload this fix to
On Thu, 1 Dec 2016 11:29:25 + Iain Lane
wrote:
> On Thu, Dec 01, 2016 at 11:21:49AM +, Iain Lane wrote:
> > Control: tags 846372 + pending
> >
> > This one works. Here's the diff which I'm uploading to DELAYED/5. Let me
> > know if you want to handle it
On 2017-01-04 19:51, Samuel Thibault wrote:
Hello,
Gilles Filippini, on Wed 04 Jan 2017 19:31:28 +0100, wrote:
On Wed, 28 Dec 2016 02:23:24 +0200 Adrian Bunk <b...@stusta.de> wrote:
> This looks like a threading bug in Scilab exposed by TSX.
I've just noticed this RC bug [1] again
Control: tag -1 + help
Hi,
On Wed, 28 Dec 2016 02:23:24 +0200 Adrian Bunk wrote:
> This looks like a threading bug in Scilab exposed by TSX.
I've just noticed this RC bug [1] against scilab. After reading through
the recent thread on this subject [2] I must admit I have no clue
-Nru mclibs-20061220+dfsg3/debian/changelog
mclibs-20061220+dfsg3/debian/changelog
--- mclibs-20061220+dfsg3/debian/changelog 2013-08-23 19:13:53.0
+0200
+++ mclibs-20061220+dfsg3/debian/changelog 2017-03-05 22:14:26.0
+0100
@@ -1,3 +1,11 @@
+mclibs (20061220+dfsg3-3.
gelog 2017-05-13 14:42:44.0 +0200
@@ -1,3 +1,11 @@
+paw (1:2.14.04.dfsg.2-9.1) UNRELEASED; urgency=medium
+
+ * Non-maintainer upload
+ * debian/add-ons/Makefile: build pawX11 and paw++ with -no-pie
+(closes: #86)
+
+ -- Gilles Filippini <p...@debian.org> Sat, 13 May
s1/debian/changelog2017-10-12 13:53:21.0 +0200
@@ -1,3 +1,10 @@
+shark (3.1.3+ds1-2.1) UNRELEASED; urgency=medium
+
+ * Non-maintainer upload
+ * New patch gcc-7.patch to fix FTBFS with GCC-7
+
+ -- Gilles Filippini <p...@debian.org> Thu, 12 Oct 2017 13:53:21 +0200
+
shark (3.1.3+d
.0+dfsg1/debian/changelog
--- ovito-2.9.0+dfsg1/debian/changelog 2017-08-10 19:44:59.0 +0200
+++ ovito-2.9.0+dfsg1/debian/changelog 2017-10-16 12:24:21.0 +0200
@@ -1,3 +1,10 @@
+ovito (2.9.0+dfsg1-2.1) UNRELEASED; urgency=medium
+
+ * Non-maintainer upload.
+ * Force using defau
changelog
--- nexus-4.3.2-svn1921/debian/changelog2017-05-11 09:23:17.0
+0200
+++ nexus-4.3.2-svn1921/debian/changelog2017-10-11 19:15:12.0
+0200
@@ -1,3 +1,12 @@
+nexus (4.3.2-svn1921-5.1) UNRELEASED; urgency=medium
+
+ * Non-maintainer upload.
+ * debian/control: swi
Package: libopencv3.2-java
Version: 3.2.0+dfsg-2
Severity: normal
Control: block 877075 by -1
Control: tags -1 + patch
On Tue, 17 Oct 2017 12:48:29 +0200 Mattia Rizzolo <mat...@debian.org> wrote:
> On Tue, Oct 17, 2017 at 10:26:11AM +0200, Gilles Filippini wrote:
> > How about ma
Source: xmds2
Version: 2.2.3+dfsg-3
Severity: normal
Control: block 878535 by -1
-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256
Hi,
libhdf5-serial-dev has been a transitional dummy package for at least 3 Debian
releases.
Please build-depend on libhdf5-dev instead.
Thanks,
_g.
- -- System
: medium
Maintainer: Debian Science Team
<debian-science-maintainers@lists.alioth.debian.org>
Changed-By: Gilles Filippini <p...@debian.org>
Description:
code-saturne - General purpose Computational Fluid Dynamics (CFD) software
code-saturne-bin - General purpose Computational Fluid D
ers@lists.alioth.debian.org>
Changed-By: Gilles Filippini <p...@debian.org>
Description:
cgns-convert - CFD General Notation System - Conversion tools
libcgns-dev - CFD General Notation System library
libcgns3.3 - CFD General Notation System library
Closes: 890271
Changes:
libcgns (3.3.0
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