Re: Bug#889147: abyss: PairedDBG_LoadAlgorithm test fails on sparc64 due to strict alignment violation

2018-02-02 Thread James Clarke
On 2 Feb 2018, at 15:49, David Matthew Mattli wrote: > > James Clarke writes: > >> user debian-sparc@lists.debian.org >> usertags sparc64 >> thanks >> >> (You missed the User: pseudoheader) >> >>> On 2 Feb 2018, at 14:46, David Matthew Mattli

Re: Bug#889147: abyss: PairedDBG_LoadAlgorithm test fails on sparc64 due to strict alignment violation

2018-02-02 Thread David Matthew Mattli
James Clarke writes: > user debian-sparc@lists.debian.org > usertags sparc64 > thanks > > (You missed the User: pseudoheader) > >> On 2 Feb 2018, at 14:46, David Matthew Mattli wrote: >> >> Package: abyss >> Severity: normal >> Tags: patch upstream >>

Re: Bug#889147: abyss: PairedDBG_LoadAlgorithm test fails on sparc64 due to strict alignment violation

2018-02-02 Thread James Clarke
user debian-sparc@lists.debian.org usertags sparc64 thanks (You missed the User: pseudoheader) > On 2 Feb 2018, at 14:46, David Matthew Mattli wrote: > > Package: abyss > Severity: normal > Tags: patch upstream > Usertags: sparc64 > > Dear Maintainer, > > This package

Bug#889147: abyss: PairedDBG_LoadAlgorithm test fails on sparc64 due to strict alignment violation

2018-02-02 Thread David Matthew Mattli
Package: abyss Severity: normal Tags: patch upstream Usertags: sparc64 Dear Maintainer, This package currently FTBFS on sparc64 due to the PairedDBG_LoadAlgorithm test failing with a SIGBUS. The Kmer.load and Kmer.storeReverse methods in the Common/Kmer.cpp file cast a uint8_t* to a size_t*