Package: wnpp
Severity: wishlist
Owner: Debian Med team <debian-...@lists.debian.org>
X-Debbugs-Cc: debian-de...@lists.debian.org, debian-...@lists.debian.org

* Package name    : jaligner
  Version         : 1.0
  Upstream Author : Ahmed Moustafa <ah...@users.sf.net>
* URL             : http://jaligner.sf.net
* License         : GPL
  Programming Lang: Java
  Description     : implementation of the Smith-Waterman algorithm with
Gotoh's improvement

JAligner is an open source Java implementation of the Smith-Waterman
 algorithm with Gotoh's improvement for biological local pairwise sequence
 alignment with the affine gap penalty model.

jaligner is a dependency of many bioinformatic programs including
trinityrnaseq. The packaging was started by Tim Booth and will be group
maintained by the Debian Med team.

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