Package: wnpp Severity: wishlist Owner: Andreas Tille <ti...@debian.org>
* Package name : artfastqgenerator Version : 0.0.20150519 Upstream Author : Matthew Frampton <matthew.framp...@icr.ac.uk> * URL : https://sourceforge.net/projects/artfastqgen * License : GPL Programming Lang: Java Description : ouputs artificial FASTQ files derived from a reference genome ArtificialFastqGenerator takes the reference genome (in FASTA format) as input and outputs artificial FASTQ files in the Sanger format. It can accept Phred base quality scores from existing FASTQ files, and use them to simulate sequencing errors. Since the artificial FASTQs are derived from the reference genome, the reference genome provides a gold-standard for calling variants (Single Nucleotide Polymorphisms (SNPs) and insertions and deletions (indels)). This enables evaluation of a Next Generation Sequencing (NGS) analysis pipeline which aligns reads to the reference genome and then calls the variants. This package will be maintained by the Debian Med team at Vcs-Git: https://anonscm.debian.org/git/debian-med/artfastqgenerator.git