Curt Bergmann created ARROW-8566:
------------------------------------
Summary: Upgraded from r package arrow 16 to r package arrow 17
and now get an error when writing posixct to spark
Key: ARROW-8566
URL: https://issues.apache.org/jira/browse/ARROW-8566
Project: Apache Arrow
Issue Type: Bug
Components: R
Affects Versions: 0.17.0
Environment: #> R version 3.6.3 (2020-02-29)
#> Platform: x86_64-apple-darwin15.6.0 (64-bit)
#> Running under: macOS Mojave 10.14.6
sparklyr::spark_version(sc)
#> [1] '2.4.5'
Reporter: Curt Bergmann
{{{{monospaced text}}``` r
library(DBI)
library(sparklyr)
library(arrow)
#>
#> Attaching package: 'arrow'
#> The following object is masked from 'package:utils':
#>
#> timestamp
sc <- spark_connect(master = "local")
sparklyr::spark_version(sc)
#> [1] '2.4.5'
x <- data.frame(y = Sys.time())
dbWriteTable(sc, "test_posixct", x)
#> Error: org.apache.spark.SparkException: Job aborted.
#> at
org.apache.spark.sql.execution.datasources.FileFormatWriter$.write(FileFormatWriter.scala:198)
#> at
org.apache.spark.sql.execution.datasources.InsertIntoHadoopFsRelationCommand.run(InsertIntoHadoopFsRelationCommand.scala:159)
#> at
org.apache.spark.sql.execution.datasources.DataSource.writeAndRead(DataSource.scala:503)
#> at
org.apache.spark.sql.execution.command.CreateDataSourceTableAsSelectCommand.saveDataIntoTable(createDataSourceTables.scala:217)
#> at
org.apache.spark.sql.execution.command.CreateDataSourceTableAsSelectCommand.run(createDataSourceTables.scala:176)
#> at
org.apache.spark.sql.execution.command.DataWritingCommandExec.sideEffectResult$lzycompute(commands.scala:104)
#> at
org.apache.spark.sql.execution.command.DataWritingCommandExec.sideEffectResult(commands.scala:102)
#> at
org.apache.spark.sql.execution.command.DataWritingCommandExec.doExecute(commands.scala:122)
#> at
org.apache.spark.sql.execution.SparkPlan$$anonfun$execute$1.apply(SparkPlan.scala:131)
#> at
org.apache.spark.sql.execution.SparkPlan$$anonfun$execute$1.apply(SparkPlan.scala:127)
#> at
org.apache.spark.sql.execution.SparkPlan$$anonfun$executeQuery$1.apply(SparkPlan.scala:155)
#> at
org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:151)
#> at org.apache.spark.sql.execution.SparkPlan.executeQuery(SparkPlan.scala:152)
#> at org.apache.spark.sql.execution.SparkPlan.execute(SparkPlan.scala:127)
#> at
org.apache.spark.sql.execution.QueryExecution.toRdd$lzycompute(QueryExecution.scala:83)
#> at
org.apache.spark.sql.execution.QueryExecution.toRdd(QueryExecution.scala:81)
#> at
org.apache.spark.sql.DataFrameWriter$$anonfun$runCommand$1.apply(DataFrameWriter.scala:676)
#> at
org.apache.spark.sql.DataFrameWriter$$anonfun$runCommand$1.apply(DataFrameWriter.scala:676)
#> at
org.apache.spark.sql.execution.SQLExecution$$anonfun$withNewExecutionId$1.apply(SQLExecution.scala:80)
#> at
org.apache.spark.sql.execution.SQLExecution$.withSQLConfPropagated(SQLExecution.scala:127)
#> at
org.apache.spark.sql.execution.SQLExecution$.withNewExecutionId(SQLExecution.scala:75)
#> at org.apache.spark.sql.DataFrameWriter.runCommand(DataFrameWriter.scala:676)
#> at
org.apache.spark.sql.DataFrameWriter.createTable(DataFrameWriter.scala:474)
#> at
org.apache.spark.sql.DataFrameWriter.saveAsTable(DataFrameWriter.scala:453)
#> at
org.apache.spark.sql.DataFrameWriter.saveAsTable(DataFrameWriter.scala:409)
#> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
#> at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
#> at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
#> at java.lang.reflect.Method.invoke(Method.java:498)
#> at sparklyr.Invoke.invoke(invoke.scala:147)
#> at sparklyr.StreamHandler.handleMethodCall(stream.scala:136)
#> at sparklyr.StreamHandler.read(stream.scala:61)
#> at
sparklyr.BackendHandler$$anonfun$channelRead0$1.apply$mcV$sp(handler.scala:58)
#> at scala.util.control.Breaks.breakable(Breaks.scala:38)
#> at sparklyr.BackendHandler.channelRead0(handler.scala:38)
#> at sparklyr.BackendHandler.channelRead0(handler.scala:14)
#> at
io.netty.channel.SimpleChannelInboundHandler.channelRead(SimpleChannelInboundHandler.java:105)
#> at
io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:374)
#> at
io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:360)
#> at
io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:352)
#> at
io.netty.handler.codec.MessageToMessageDecoder.channelRead(MessageToMessageDecoder.java:102)
#> at
io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:374)
#> at
io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:360)
#> at
io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:352)
#> at
io.netty.handler.codec.ByteToMessageDecoder.fireChannelRead(ByteToMessageDecoder.java:328)
#> at
io.netty.handler.codec.ByteToMessageDecoder.channelRead(ByteToMessageDecoder.java:302)
#> at
io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:374)
#> at
io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:360)
#> at
io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:352)
#> at
io.netty.channel.DefaultChannelPipeline$HeadContext.channelRead(DefaultChannelPipeline.java:1422)
#> at
io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:374)
#> at
io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:360)
#> at
io.netty.channel.DefaultChannelPipeline.fireChannelRead(DefaultChannelPipeline.java:931)
#> at
io.netty.channel.nio.AbstractNioByteChannel$NioByteUnsafe.read(AbstractNioByteChannel.java:163)
#> at
io.netty.channel.nio.NioEventLoop.processSelectedKey(NioEventLoop.java:700)
#> at
io.netty.channel.nio.NioEventLoop.processSelectedKeysOptimized(NioEventLoop.java:635)
#> at
io.netty.channel.nio.NioEventLoop.processSelectedKeys(NioEventLoop.java:552)
#> at io.netty.channel.nio.NioEventLoop.run(NioEventLoop.java:514)
#> at
io.netty.util.concurrent.SingleThreadEventExecutor$6.run(SingleThreadEventExecutor.java:1044)
#> at io.netty.util.internal.ThreadExecutorMap$2.run(ThreadExecutorMap.java:74)
#> at
io.netty.util.concurrent.FastThreadLocalRunnable.run(FastThreadLocalRunnable.java:30)
#> at java.lang.Thread.run(Thread.java:748)
#> Caused by: org.apache.spark.SparkException: Job aborted due to stage
failure: Task 0 in stage 1.0 failed 1 times, most recent failure: Lost task 0.0
in stage 1.0 (TID 1, localhost, executor driver):
java.lang.UnsupportedOperationException
#> at
org.apache.spark.sql.vectorized.ArrowColumnVector.<init>(ArrowColumnVector.java:173)
#> at
sparklyr.ArrowConvertersImpl$$anon$1$$anonfun$1.apply(arrowconverters.scala:210)
#> at
sparklyr.ArrowConvertersImpl$$anon$1$$anonfun$1.apply(arrowconverters.scala:209)
#> at
scala.collection.TraversableLike$$anonfun$map$1.apply(TraversableLike.scala:234)
#> at
scala.collection.TraversableLike$$anonfun$map$1.apply(TraversableLike.scala:234)
#> at scala.collection.Iterator$class.foreach(Iterator.scala:891)
#> at scala.collection.AbstractIterator.foreach(Iterator.scala:1334)
#> at scala.collection.IterableLike$class.foreach(IterableLike.scala:72)
#> at scala.collection.AbstractIterable.foreach(Iterable.scala:54)
#> at scala.collection.TraversableLike$class.map(TraversableLike.scala:234)
#> at scala.collection.AbstractTraversable.map(Traversable.scala:104)
#> at sparklyr.ArrowConvertersImpl$$anon$1.nextBatch(arrowconverters.scala:209)
#> at sparklyr.ArrowConvertersImpl$$anon$1.<init>(arrowconverters.scala:172)
#> at
sparklyr.ArrowConvertersImpl.fromPayloadIterator(arrowconverters.scala:170)
#> at
sparklyr.ArrowConvertersImpl.fromPayloadIterator(arrowconverters.scala:157)
#> at sparklyr.ArrowConverters$$anonfun$3.apply(arrowconverters.scala:293)
#> at sparklyr.ArrowConverters$$anonfun$3.apply(arrowconverters.scala:290)
#> at
org.apache.spark.rdd.RDD$$anonfun$mapPartitions$1$$anonfun$apply$23.apply(RDD.scala:823)
#> at
org.apache.spark.rdd.RDD$$anonfun$mapPartitions$1$$anonfun$apply$23.apply(RDD.scala:823)
#> at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
#> at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:346)
#> at org.apache.spark.rdd.RDD.iterator(RDD.scala:310)
#> at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
#> at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:346)
#> at org.apache.spark.rdd.RDD.iterator(RDD.scala:310)
#> at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
#> at org.apache.spark.scheduler.Task.run(Task.scala:123)
#> at
org.apache.spark.executor.Executor$TaskRunner$$anonfun$10.apply(Executor.scala:408)
#> at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1360)
#> at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:414)
#> at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
#> at java.u
sessionInfo()
#> R version 3.6.3 (2020-02-29)
#> Platform: x86_64-apple-darwin15.6.0 (64-bit)
#> Running under: macOS Mojave 10.14.6
#>
#> Matrix products: default
#> BLAS:
/Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libRblas.0.dylib
#> LAPACK:
/Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libRlapack.dylib
#>
#> locale:
#> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
#>
#> attached base packages:
#> [1] stats graphics grDevices utils datasets methods base
#>
#> other attached packages:
#> [1] arrow_0.17.0 sparklyr_1.2.0 DBI_1.1.0
#>
#> loaded via a namespace (and not attached):
#> [1] Rcpp_1.0.4 compiler_3.6.3 pillar_1.4.3 dbplyr_1.4.3
#> [5] highr_0.8 r2d3_0.2.3 base64enc_0.1-3 tools_3.6.3
#> [9] bit_1.1-15.2 digest_0.6.25 jsonlite_1.6.1 evaluate_0.14
#> [13] tibble_3.0.1 lifecycle_0.2.0 pkgconfig_2.0.3 rlang_0.4.5
#> [17] rstudioapi_0.11 parallel_3.6.3 yaml_2.2.1 xfun_0.13
#> [21] withr_2.2.0 httr_1.4.1 stringr_1.4.0 dplyr_0.8.5
#> [25] knitr_1.28 askpass_1.1 generics_0.0.2 htmlwidgets_1.5.1
#> [29] vctrs_0.2.4 rprojroot_1.3-2 bit64_0.9-7 tidyselect_1.0.0
#> [33] glue_1.4.0 forge_0.2.0 R6_2.4.1 rmarkdown_2.1
#> [37] purrr_0.3.4 magrittr_1.5 backports_1.1.6 htmltools_0.4.0
#> [41] ellipsis_0.3.0 assertthat_0.2.1 config_0.3 stringi_1.4.6
#> [45] openssl_1.4.1 crayon_1.3.4
```
<sup>Created on 2020-04-23 by the [reprex
package](https://reprex.tidyverse.org) (v0.3.0)</sup>}}
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