RE: Reg : cTakes ubuntu Operating system issue... [EXTERNAL]

2017-08-04 Thread Finan, Sean 
Hi Shyam,

Is there any chance that you missed the –Xmx3G in your servlet launch?

Sean

From: Ks Sunder [mailto:shyam...@gmail.com]
Sent: Friday, August 04, 2017 3:57 AM
To: dev@ctakes.apache.org
Cc: Finan, Sean
Subject: Reg : cTakes ubuntu Operating system issue... [EXTERNAL]

Hi ,

I deployed cTakes App in ubuntu operating system server is Apache Tomcat7, I am 
getting this error..


Aug 02, 2017 9:50:46 AM org.apache.catalina.core.StandardContext loadOnStartup
SEVERE: Servlet [cTakesWebClass] in web application [/WebAppcTakes] threw 
load() exception
java.sql.SQLException: Out of Memory
at org.hsqldb.jdbc.Util.sqlException(Unknown Source)
at org.hsqldb.jdbc.jdbcConnection.(Unknown Source)
at org.hsqldb.jdbcDriver.getConnection(Unknown Source)
at org.hsqldb.jdbcDriver.connect(Unknown Source)
at java.sql.DriverManager.getConnection(DriverManager.java:664)
at java.sql.DriverManager.getConnection(DriverManager.java:247)
at 
org.apache.ctakes.dictionary.lookup2.util.JdbcConnectionFactory.getConnection(JdbcConnectionFactory.java:84)
at 
org.apache.ctakes.dictionary.lookup2.dictionary.JdbcRareWordDictionary.(JdbcRareWordDictionary.java:91)
at 
org.apache.ctakes.dictionary.lookup2.dictionary.JdbcRareWordDictionary.(JdbcRareWordDictionary.java:72)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at 
sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at 
sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at 
org.apache.ctakes.dictionary.lookup2.dictionary.DictionaryDescriptorParser.parseDictionary(DictionaryDescriptorParser.java:196)
at 
org.apache.ctakes.dictionary.lookup2.dictionary.DictionaryDescriptorParser.parseDictionaries(DictionaryDescriptorParser.java:156)
at 
org.apache.ctakes.dictionary.lookup2.dictionary.DictionaryDescriptorParser.parseDescriptor(DictionaryDescriptorParser.java:128)
at 
org.apache.ctakes.dictionary.lookup2.ae.AbstractJCasTermAnnotator.initialize(AbstractJCasTermAnnotator.java:116)
at 
org.apache.uima.analysis_engine.impl.PrimitiveAnalysisEngine_impl.initializeAnalysisComponent(PrimitiveAnalysisEngine_impl.java:250)
at 
org.apache.uima.analysis_engine.impl.PrimitiveAnalysisEngine_impl.initialize(PrimitiveAnalysisEngine_impl.java:156)
at 
org.apache.uima.impl.AnalysisEngineFactory_impl.produceResource(AnalysisEngineFactory_impl.java:94)
at 
org.apache.uima.impl.CompositeResourceFactory_impl.produceResource(CompositeResourceFactory_impl.java:62)
at org.apache.uima.UIMAFramework.produceResource(UIMAFramework.java:269)
at org.apache.uima.UIMAFramework.produceAnalysisEngine(UIMAFramework.java:387)
at org.apache.uima.analysis_engine.asb.impl.ASB_impl.setup(ASB_impl.java:254)
at 
org.apache.uima.analysis_engine.impl.AggregateAnalysisEngine_impl.initASB(AggregateAnalysisEngine_impl.java:431)
at 
org.apache.uima.analysis_engine.impl.AggregateAnalysisEngine_impl.initializeAggregateAnalysisEngine(AggregateAnalysisEngine_impl.java:375)
at 
org.apache.uima.analysis_engine.impl.AggregateAnalysisEngine_impl.initialize(AggregateAnalysisEngine_impl.java:185)
at 
org.apache.uima.fit.factory.AnalysisEngineFactory.createEngine(AnalysisEngineFactory.java:711)
at 
org.apache.uima.fit.factory.AggregateBuilder.createAggregate(AggregateBuilder.java:207)
at com.test.webservlet.app.cTakesWebClass.init(cTakesWebClass.java:36)
at 
org.apache.catalina.core.StandardWrapper.initServlet(StandardWrapper.java:1269)
at 
org.apache.catalina.core.StandardWrapper.loadServlet(StandardWrapper.java:1182)
at org.apache.catalina.core.StandardWrapper.load(StandardWrapper.java:1072)
at 
org.apache.catalina.core.StandardContext.loadOnStartup(StandardContext.java:5368)
at 
org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5660)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:145)
at 
org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:899)
at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:875)
at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:652)
at org.apache.catalina.startup.HostConfig.deployWAR(HostConfig.java:1092)
at org.apache.catalina.startup.HostConfig$DeployWar.run(HostConfig.java:1984)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at 
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at 
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:748)

Aug 02, 2017 9:50:51 AM org.apache.catalina.core.ApplicationContext

Reg : cTakes ubuntu Operating system issue...

2017-08-04 Thread Ks Sunder 
Hi ,

I deployed cTakes App in ubuntu operating system, I am getting this error..


Aug 02, 2017 9:50:46 AM org.apache.catalina.core.StandardContext
loadOnStartup
SEVERE: Servlet [cTakesWebClass] in web application [/WebAppcTakes] threw
load() exception
java.sql.SQLException: Out of Memory
at org.hsqldb.jdbc.Util.sqlException(Unknown Source)
at org.hsqldb.jdbc.jdbcConnection.(Unknown Source)
at org.hsqldb.jdbcDriver.getConnection(Unknown Source)
at org.hsqldb.jdbcDriver.connect(Unknown Source)
at java.sql.DriverManager.getConnection(DriverManager.java:664)
at java.sql.DriverManager.getConnection(DriverManager.java:247)
at
org.apache.ctakes.dictionary.lookup2.util.JdbcConnectionFactory.getConnection(JdbcConnectionFactory.java:84)
at
org.apache.ctakes.dictionary.lookup2.dictionary.JdbcRareWordDictionary.(JdbcRareWordDictionary.java:91)
at
org.apache.ctakes.dictionary.lookup2.dictionary.JdbcRareWordDictionary.(JdbcRareWordDictionary.java:72)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at
sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at
sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at
org.apache.ctakes.dictionary.lookup2.dictionary.DictionaryDescriptorParser.parseDictionary(DictionaryDescriptorParser.java:196)
at
org.apache.ctakes.dictionary.lookup2.dictionary.DictionaryDescriptorParser.parseDictionaries(DictionaryDescriptorParser.java:156)
at
org.apache.ctakes.dictionary.lookup2.dictionary.DictionaryDescriptorParser.parseDescriptor(DictionaryDescriptorParser.java:128)
at
org.apache.ctakes.dictionary.lookup2.ae.AbstractJCasTermAnnotator.initialize(AbstractJCasTermAnnotator.java:116)
at
org.apache.uima.analysis_engine.impl.PrimitiveAnalysisEngine_impl.initializeAnalysisComponent(PrimitiveAnalysisEngine_impl.java:250)
at
org.apache.uima.analysis_engine.impl.PrimitiveAnalysisEngine_impl.initialize(PrimitiveAnalysisEngine_impl.java:156)
at
org.apache.uima.impl.AnalysisEngineFactory_impl.produceResource(AnalysisEngineFactory_impl.java:94)
at
org.apache.uima.impl.CompositeResourceFactory_impl.produceResource(CompositeResourceFactory_impl.java:62)
at org.apache.uima.UIMAFramework.produceResource(UIMAFramework.java:269)
at
org.apache.uima.UIMAFramework.produceAnalysisEngine(UIMAFramework.java:387)
at
org.apache.uima.analysis_engine.asb.impl.ASB_impl.setup(ASB_impl.java:254)
at
org.apache.uima.analysis_engine.impl.AggregateAnalysisEngine_impl.initASB(AggregateAnalysisEngine_impl.java:431)
at
org.apache.uima.analysis_engine.impl.AggregateAnalysisEngine_impl.initializeAggregateAnalysisEngine(AggregateAnalysisEngine_impl.java:375)
at
org.apache.uima.analysis_engine.impl.AggregateAnalysisEngine_impl.initialize(AggregateAnalysisEngine_impl.java:185)
at
org.apache.uima.fit.factory.AnalysisEngineFactory.createEngine(AnalysisEngineFactory.java:711)
at
org.apache.uima.fit.factory.AggregateBuilder.createAggregate(AggregateBuilder.java:207)
at com.test.webservlet.app.cTakesWebClass.init(cTakesWebClass.java:36)
at
org.apache.catalina.core.StandardWrapper.initServlet(StandardWrapper.java:1269)
at
org.apache.catalina.core.StandardWrapper.loadServlet(StandardWrapper.java:1182)
at org.apache.catalina.core.StandardWrapper.load(StandardWrapper.java:1072)
at
org.apache.catalina.core.StandardContext.loadOnStartup(StandardContext.java:5368)
at
org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5660)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:145)
at
org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:899)
at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:875)
at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:652)
at org.apache.catalina.startup.HostConfig.deployWAR(HostConfig.java:1092)
at
org.apache.catalina.startup.HostConfig$DeployWar.run(HostConfig.java:1984)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:748)

Aug 02, 2017 9:50:51 AM org.apache.catalina.core.ApplicationContext log
INFO: ContextListener: contextInitialized()
Aug 02, 2017 9:50:51 AM org.apache.catalina.core.ApplicationContext log
INFO: SessionListener: contextInitialized()
Aug 02, 2017 9:50:51 AM org.apache.catalina.core.ApplicationContext log
INFO: ContextListener:
attributeAdded('org.apache.jasper.compiler.TldLocationsCache',
'org.apache.jasper.compiler.TldLocationsCache@1b277e2c')




.

But in Windows its working fine,please help me on this issue..


regads,
shyam k.