Re: MedEx-UIMA

2013-07-22 Thread Hua Xu
Pei, MedEx-UIMA is rule-based, instead of ML. :) What are the work involved in using the cTAKES common type system? We could consider it when Min has time. Thanks. Hua From: , Pei mailto:pei.c...@childrens.harvard.edu>> Date: Monday, July 22, 2013 3:30 PM To: Min Jiang mailto:min.ji...@uth.tmc

MedEx-UIMA

2013-07-22 Thread Chen, Pei
Dr. Xu, That was a wonderful presentation on MedEx (ML based medication extraction) during the iDASH webinar. Would there be any interest in contributing/integrating MedEx-UIMA as an Apache cTAKES [1] component/module? I had a quick look at the code and it looks like it's already using Java/UIM

Re: Build failed in Jenkins: ctakes-trunk-compiletest #355

2013-07-22 Thread Coarr, Matt
It's fixed and building correctly. https://builds.apache.org/job/ctakes-trunk-compiletest/356/?auto_refresh=false I had made some changes to update dependencies and then reverted back to the old version (all on 7/18), but in the mean time, a directory that was still needed was deleted. I'm ver

Re: Build failed in Jenkins: ctakes-trunk-compiletest #355

2013-07-22 Thread Steven Bethard
Here's that error again: On 22 Jul2013, at 12:05 , Apache Jenkins Server wrote: > [ERROR] 'dependencies.dependency.version' for net.sf.mastif:mastif-zoner:jar > is missing. @ line 36, column 15 Could whoever is taking care of "ctakes-assertion-zoner" fix this? We haven't had a successful buil

Re: to involve in your development group

2013-07-22 Thread Mattmann, Chris A (398J)
Hi Sandeep, I'll try and review this today. Cheers, Chris ++ Chris Mattmann, Ph.D. Senior Computer Scientist NASA Jet Propulsion Laboratory Pasadena, CA 91109 USA Office: 171-266B, Mailstop: 171-246 Email: chris.a.mattm...@nasa.gov

RE: to involve in your development group

2013-07-22 Thread Finan, Sean
Hi Sandeep, I just took a peek at the JavaOcr code, and it looks like they perform image filtering in the PixelImage class. This would probably cause a problem with dot matrix images as every corner of every dot would be removed as "noise", so dots that participate in curves on characters such

Re: to involve in your development group

2013-07-22 Thread sandeep rg
sir, i have gone through some of the medical record such as bills,patient details etc. most of them are printed using dot matrix printer,which is very hard to extract such type text from scanned images.i have done testing with some professional software such as abbyy fine reader which also given a