Lewis John McGibbney created JOSHUA-320:
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Summary: --joshua-mem pipeline parameter is not populated to mert
processes
Key: JOSHUA-320
URL: https://issues.apache.org/jira/browse/JOSHUA-320
Hi Lewis,
You are confusing two things.
MERT calls Joshua, and passes it however much memory you set with --joshua-mem.
It doesn't this by writing (see pipeline.pl line 1550)
$tunedir/decoder_command, which is what Z-MERT calls to run Joshua.
Z-MERT is itself a Java program that also gets 4g.
Lewis — why are you marking these as fixed? This is better classified as
dropped or no longer needed.
> On Oct 26, 2016, at 3:28 AM, Lewis John McGibbney (JIRA)
> wrote:
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yes mert must be dying. Can you post the contents of the tune/ directory? and
tail mert.log?
matt (from my phone)
> Le 27 oct. 2016 à 00:49, John Hewitt a écrit :
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> It seems like MERT isn't writing it's final config file (which is typical
> of MERT, in my