[hwloc-devel] Create success (hwloc r1.5a1r4417)

2012-03-21 Thread MPI Team
Creating nightly hwloc snapshot SVN tarball was a success. Snapshot: hwloc 1.5a1r4417 Start time: Wed Mar 21 21:01:01 EDT 2012 End time: Wed Mar 21 21:04:16 EDT 2012 Your friendly daemon, Cyrador

Re: [hwloc-devel] BGQ empty topology with MPI

2012-03-21 Thread Daniel Ibanez
This is fixed by setting HWLOC_TOPOLOGY_FLAG_WHOLE_SYSTEM One of the topology pruning functions disabled by this flag must have been causing the problem. Again, this only happens when MPI calls are made alongside hwloc calls. On Wed, Mar 21, 2012 at 10:17 AM, Daniel Ibanez

Re: [OMPI devel] [OMPI svn-full] svn:open-mpi r26172

2012-03-21 Thread Josh Hursey
I see your point about setting MPI_ERR_PENDING on the internal status versus the status returned by MPI_Waitall. As I mentioned, the reason I choose to do that is to support the ompi_errhandler_request_invoke() function. I could not think of an better way to fix this, so I'm open to ideas.

Re: [OMPI devel] [OMPI svn-full] svn:open-mpi r26172

2012-03-21 Thread George Bosilca
My point was that MPI_ERR_PENDING should never be set on a specific request. MPI_ERR_PENDING should only be returned in the array of statuses attached to MPI_Waitall. Thus, there is no need to remove it from any request. In addition, there is another reason why this is unnecessary (and I was

Re: [OMPI devel] [OMPI svn-full] svn:open-mpi r26172

2012-03-21 Thread Josh Hursey
In the patch for errhandler_invoke.c, you can see that we need to check for MPI_ERR_PENDING to make sure that we do not free the request when we are trying to decide if we should invoke the error handler. So setting the internal req->req_status.MPI_ERROR to MPI_ERR_PENDING made it possible to

Re: [OMPI devel] [OMPI svn-full] svn:open-mpi r26172

2012-03-21 Thread George Bosilca
Josh, I don't agree that these changes are required. In the current standard (2.2), MPI_ERR_PENDING is only allowed to be returned by MPI_WAITALL, in some very specific conditions. Here is the snippet from the MPI standard clarifying this behavior. > When one or more of the communications

[OMPI devel] RFC: change default for tuned alltoallv to pairwise

2012-03-21 Thread Nathan Hjelm
What: Change coll tuned default to pairwise exchange Why: The linear algorithm does not scale to any reasonable number of PEs When: Timeout in 2 days (Fri) Is there any reason the default should not be changed? -Nathan HPC-3, LANL

Re: [OMPI devel] SUSE verification

2012-03-21 Thread TERRY DONTJE
Sorry the below cc line if for Solaris Studio compilers if you have gcc replace "-G" with "-shared". thanks, --td On 3/21/2012 11:32 AM, TERRY DONTJE wrote: I ran into a problem on a Suse 10.1 system and was wondering if anyone has a version of Suse newer than 10.1 that can try the following

[OMPI devel] SUSE verification

2012-03-21 Thread TERRY DONTJE
I ran into a problem on a Suse 10.1 system and was wondering if anyone has a version of Suse newer than 10.1 that can try the following test and send me the results. -testpci cat

Re: [hwloc-devel] BGQ empty topology with MPI

2012-03-21 Thread Daniel Ibanez
Chris: the compute nodes run CNK On Wed, Mar 21, 2012 at 10:08 AM, Daniel Ibanez wrote: > Attached is the stderr and stdout from lstopo compiled as you said. > I can't run hwloc-gather-topology.sh on the compute nodes > since its a script, but I can run it on the front

Re: [hwloc-devel] BGQ empty topology with MPI

2012-03-21 Thread Daniel Ibanez
Attached is the stderr and stdout from lstopo compiled as you said. I can't run hwloc-gather-topology.sh on the compute nodes since its a script, but I can run it on the front end node. On Wed, Mar 21, 2012 at 3:36 AM, Samuel Thibault wrote: > Daniel Ibanez, le Wed 21

[OMPI devel] MPI_Init_thread problem on ubuntu ARM (open-mpi 1.4.3)

2012-03-21 Thread Juan Solano
Hello, I have a problem using Open MPI on my linux system (pandaboard running Ubuntu precise). A call to MPI_Init_thread with the following parameters hangs: MPI_Init_thread(0, 0, MPI_THREAD_MULTIPLE, ); it seems that we are stuck on this loop in function opal_condition_wait(): while

Re: [hwloc-devel] BGQ empty topology with MPI

2012-03-21 Thread Samuel Thibault
Daniel Ibanez, le Wed 21 Mar 2012 03:37:25 +0100, a écrit : > Please let me know if theres a hint of what could be causing it, > where to post, and what info to provide. This is already the proper list. Please attach the output of lstopo after having given the --enable-debug option to