Thanks for the report. As Ralph indicated the threading support in Open
MPI is not good right now, but we are working to make it better.
I have filed a ticket (https://svn.open-mpi.org/trac/ompi/ticket/1267)
so we do not loose track of this issue, and attached a potential fix to
the ticket.
Thanks,
Tim
Joao Vicente Lima wrote:
Hi,
I getting a error on call init_thread and comm_spawn on this code:
#include "mpi.h"
#include <stdio.h>
int
main (int argc, char *argv[])
{
int provided;
MPI_Comm parentcomm, intercomm;
MPI_Init_thread(&argc, &argv, MPI_THREAD_MULTIPLE, &provided);
MPI_Comm_get_parent (&parentcomm);
if (parentcomm == MPI_COMM_NULL)
{
printf ("spawning ... \n");
MPI_Comm_spawn ("./spawn1", MPI_ARGV_NULL, 1,
MPI_INFO_NULL, 0, MPI_COMM_SELF, &intercomm,
MPI_ERRCODES_IGNORE);
MPI_Comm_disconnect (&intercomm);
}
else
{
printf ("child!\n");
MPI_Comm_disconnect (&parentcomm);
}
MPI_Finalize ();
return 0;
}
and the error is:
spawning ...
opal_mutex_lock(): Resource deadlock avoided
[localhost:18718] *** Process received signal ***
[localhost:18718] Signal: Aborted (6)
[localhost:18718] Signal code: (-6)
[localhost:18718] [ 0] /lib/libpthread.so.0 [0x2b6e5d9fced0]
[localhost:18718] [ 1] /lib/libc.so.6(gsignal+0x35) [0x2b6e5dc3b3c5]
[localhost:18718] [ 2] /lib/libc.so.6(abort+0x10e) [0x2b6e5dc3c73e]
[localhost:18718] [ 3] /usr/local/mpi/ompi-svn/lib/libmpi.so.0 [0x2b6e5c9560ff]
[localhost:18718] [ 4] /usr/local/mpi/ompi-svn/lib/libmpi.so.0 [0x2b6e5c95601d]
[localhost:18718] [ 5] /usr/local/mpi/ompi-svn/lib/libmpi.so.0 [0x2b6e5c9560ac]
[localhost:18718] [ 6] /usr/local/mpi/ompi-svn/lib/libmpi.so.0 [0x2b6e5c956a93]
[localhost:18718] [ 7] /usr/local/mpi/ompi-svn/lib/libmpi.so.0 [0x2b6e5c9569dd]
[localhost:18718] [ 8] /usr/local/mpi/ompi-svn/lib/libmpi.so.0 [0x2b6e5c95797d]
[localhost:18718] [ 9]
/usr/local/mpi/ompi-svn/lib/libmpi.so.0(ompi_proc_unpack+0x1ec)
[0x2b6e5c957dd9]
[localhost:18718] [10]
/usr/local/mpi/ompi-svn/lib/openmpi/mca_dpm_orte.so [0x2b6e607f05cf]
[localhost:18718] [11]
/usr/local/mpi/ompi-svn/lib/libmpi.so.0(MPI_Comm_spawn+0x459)
[0x2b6e5c98ede9]
[localhost:18718] [12] ./spawn1(main+0x7a) [0x400ae2]
[localhost:18718] [13] /lib/libc.so.6(__libc_start_main+0xf4) [0x2b6e5dc28b74]
[localhost:18718] [14] ./spawn1 [0x4009d9]
[localhost:18718] *** End of error message ***
opal_mutex_lock(): Resource deadlock avoided
[localhost:18719] *** Process received signal ***
[localhost:18719] Signal: Aborted (6)
[localhost:18719] Signal code: (-6)
[localhost:18719] [ 0] /lib/libpthread.so.0 [0x2b9317a17ed0]
[localhost:18719] [ 1] /lib/libc.so.6(gsignal+0x35) [0x2b9317c563c5]
[localhost:18719] [ 2] /lib/libc.so.6(abort+0x10e) [0x2b9317c5773e]
[localhost:18719] [ 3] /usr/local/mpi/ompi-svn/lib/libmpi.so.0 [0x2b93169710ff]
[localhost:18719] [ 4] /usr/local/mpi/ompi-svn/lib/libmpi.so.0 [0x2b931697101d]
[localhost:18719] [ 5] /usr/local/mpi/ompi-svn/lib/libmpi.so.0 [0x2b93169710ac]
[localhost:18719] [ 6] /usr/local/mpi/ompi-svn/lib/libmpi.so.0 [0x2b9316971a93]
[localhost:18719] [ 7] /usr/local/mpi/ompi-svn/lib/libmpi.so.0 [0x2b93169719dd]
[localhost:18719] [ 8] /usr/local/mpi/ompi-svn/lib/libmpi.so.0 [0x2b931697297d]
[localhost:18719] [ 9]
/usr/local/mpi/ompi-svn/lib/libmpi.so.0(ompi_proc_unpack+0x1ec)
[0x2b9316972dd9]
[localhost:18719] [10]
/usr/local/mpi/ompi-svn/lib/openmpi/mca_dpm_orte.so [0x2b931a80b5cf]
[localhost:18719] [11]
/usr/local/mpi/ompi-svn/lib/openmpi/mca_dpm_orte.so [0x2b931a80dad7]
[localhost:18719] [12] /usr/local/mpi/ompi-svn/lib/libmpi.so.0 [0x2b9316977207]
[localhost:18719] [13]
/usr/local/mpi/ompi-svn/lib/libmpi.so.0(PMPI_Init_thread+0x166)
[0x2b93169b8622]
[localhost:18719] [14] ./spawn1(main+0x25) [0x400a8d]
[localhost:18719] [15] /lib/libc.so.6(__libc_start_main+0xf4) [0x2b9317c43b74]
[localhost:18719] [16] ./spawn1 [0x4009d9]
[localhost:18719] *** End of error message ***
--------------------------------------------------------------------------
mpirun noticed that process rank 0 with PID 18719 on node localhost
exited on signal 6 (Aborted).
--------------------------------------------------------------------------
if I change MPI_Init_thread to MPI_Init all works.
some suggest ?
The attachments contain my ompi_info (r18077) and config.log.
thanks in advance,
Joao.
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