Re: [Django] #13488: Exceptions in GEOS I/O object destructor at process exit

[Django]

#13488: Exceptions in GEOS I/O object destructor at process exit
---+
 Reporter:  mroach@…   |Owner:  jbronn
 Type:  Uncategorized  |   Status:  closed
Component:  GIS|  Version:  1.2
 Severity:  Normal |   Resolution:  fixed
 Keywords:  gis| Triage Stage:  Accepted
Has patch:  1  |  Needs documentation:  0
  Needs tests:  0  |  Patch needs improvement:  1
Easy pickings:  0  |UI/UX:  0
---+

Comment (by Abry Maxime):

 Duplicate of https://code.djangoproject.com/ticket/13843
 Fixed with
 
https://github.com/django/django/commit/8f334e55be99ae271d82f9b961a2dc6258487d9c

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Re: [Django] #13488: Exceptions in GEOS I/O object destructor at process exit

[Django]

#13488: Exceptions in GEOS I/O object destructor at process exit
---+
 Reporter:  mroach@…   |Owner:  jbronn
 Type:  Uncategorized  |   Status:  closed
Component:  GIS|  Version:  1.2
 Severity:  Normal |   Resolution:  fixed
 Keywords:  gis| Triage Stage:  Accepted
Has patch:  1  |  Needs documentation:  0
  Needs tests:  0  |  Patch needs improvement:  1
Easy pickings:  0  |UI/UX:  0
---+

Comment (by timo):

 @matt.rigal -- please open a new ticket with details.

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Re: [Django] #13488: Exceptions in GEOS I/O object destructor at process exit

[Django]

#13488: Exceptions in GEOS I/O object destructor at process exit
---+
 Reporter:  mroach@…   |Owner:  jbronn
 Type:  Uncategorized  |   Status:  closed
Component:  GIS|  Version:  1.2
 Severity:  Normal |   Resolution:  fixed
 Keywords:  gis| Triage Stage:  Accepted
Has patch:  1  |  Needs documentation:  0
  Needs tests:  0  |  Patch needs improvement:  1
Easy pickings:  0  |UI/UX:  0
---+
Changes (by matt.rigal@…):

 * ui_ux:   => 0
 * type:   => Uncategorized
 * severity:   => Normal
 * easy:   => 0


Comment:

 I actually didn't want to reopen the ticket, but I do experience the same
 issues on Django 1.5.1 with Gdal 1.10 and Geos 3.3.5 on MacOSX 10.8. And I
 do not have module-level globals.

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Re: [Django] #13488: Exceptions in GEOS I/O object destructor at process exit

[Django]

#13488: Exceptions in GEOS I/O object destructor at process exit
+---
   Reporter:  mroach@…  | Owner:  jbronn
 Status:  closed| Milestone:  1.3   
  Component:  GIS   |   Version:  1.2   
 Resolution:  fixed |  Keywords:  gis   
   Triage Stage:  Accepted  | Has patch:  1 
Needs documentation:  0 |   Needs tests:  0 
Patch needs improvement:  1 |  
+---

Comment (by jbronn):

 In [15379]:
 {{{
 #!CommitTicketReference repository="" revision="15379"
 [1.2.X] Fixed #13488 -- No longer generate unhandled exceptions that may
 occur when destructors of global GEOS I/O objects are called on process
 termination.

 Backport of r15378 from trunk.
 }}}

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Re: [Django] #13488: Exceptions in GEOS I/O object destructor at process exit

[Django]

#13488: Exceptions in GEOS I/O object destructor at process exit
+---
   Reporter:  mroach@…  | Owner:  jbronn
 Status:  closed| Milestone:  1.3   
  Component:  GIS   |   Version:  1.2   
 Resolution:  fixed |  Keywords:  gis   
   Triage Stage:  Accepted  | Has patch:  1 
Needs documentation:  0 |   Needs tests:  0 
Patch needs improvement:  1 |  
+---
Changes (by jbronn):

  * status:  reopened => closed
  * resolution:  => fixed


Comment:

 Fixed in r15378.

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Re: [Django] #13488: Exceptions in GEOS I/O object destructor at process exit

[Django]

#13488: Exceptions in GEOS I/O object destructor at process exit
+---
   Reporter:  mroach@…  | Owner:  jbronn
 Status:  reopened  | Milestone:  1.3   
  Component:  GIS   |   Version:  1.2   
 Resolution:|  Keywords:  gis   
   Triage Stage:  Accepted  | Has patch:  1 
Needs documentation:  0 |   Needs tests:  0 
Patch needs improvement:  1 |  
+---
Changes (by sheats):

 * cc: sheats@… (added)


Comment:

 I just tried the patch and it works fine -- error message goes away
 completely.  How refreshing!

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Re: [Django] #13488: Exceptions in GEOS I/O object destructor at process exit

[Django]

#13488: Exceptions in GEOS I/O object destructor at process exit
---+
  Reporter:  mro...@arinc.com  | Owner:  jbronn
Status:  reopened  | Milestone:  1.3   
 Component:  GIS   |   Version:  1.2   
Resolution:|  Keywords:  gis   
 Stage:  Accepted  | Has_patch:  1 
Needs_docs:  0 |   Needs_tests:  0 
Needs_better_patch:  1 |  
---+
Comment (by jbronn):

 There are a few of you CC'ed on this ticket, anyone tried out the patch?
 I'd like to get this into 1.3.

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Re: [Django] #13488: Exceptions in GEOS I/O object destructor at process exit

[Django]

#13488: Exceptions in GEOS I/O object destructor at process exit
---+
  Reporter:  mro...@arinc.com  | Owner:  jbronn
Status:  reopened  | Milestone:  1.3   
 Component:  GIS   |   Version:  1.2   
Resolution:|  Keywords:  gis   
 Stage:  Accepted  | Has_patch:  1 
Needs_docs:  0 |   Needs_tests:  0 
Needs_better_patch:  1 |  
---+
Comment (by jbronn):

 Need feedback from users to test this out on their platforms.  This patch
 tries to address root cause of these error messages, rather than masking
 them in a `try/except` statement.

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Re: [Django] #13488: Exceptions in GEOS I/O object destructor at process exit

[Django]

#13488: Exceptions in GEOS I/O object destructor at process exit
---+
  Reporter:  mro...@arinc.com  | Owner:  jbronn
Status:  reopened  | Milestone:  1.3   
 Component:  GIS   |   Version:  1.2   
Resolution:|  Keywords:  gis   
 Stage:  Accepted  | Has_patch:  1 
Needs_docs:  0 |   Needs_tests:  0 
Needs_better_patch:  1 |  
---+
Changes (by cdestigter):

 * cc: craig.destig...@koordinates.com (added)

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Re: [Django] #13488: Exceptions in GEOS I/O object destructor at process exit

[Django]

#13488: Exceptions in GEOS I/O object destructor at process exit
---+
  Reporter:  mro...@arinc.com  | Owner:  jbronn
Status:  reopened  | Milestone:  1.3   
 Component:  GIS   |   Version:  1.2   
Resolution:|  Keywords:  gis   
 Stage:  Accepted  | Has_patch:  1 
Needs_docs:  0 |   Needs_tests:  0 
Needs_better_patch:  1 |  
---+
Changes (by jbronn):

  * stage:  Ready for checkin => Accepted

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Re: [Django] #13488: Exceptions in GEOS I/O object destructor at process exit

[Django]

#13488: Exceptions in GEOS I/O object destructor at process exit
+---
  Reporter:  mro...@arinc.com   | Owner:  jbronn
Status:  reopened   | Milestone:  1.3   
 Component:  GIS|   Version:  1.2   
Resolution: |  Keywords:  gis   
 Stage:  Ready for checkin  | Has_patch:  1 
Needs_docs:  0  |   Needs_tests:  0 
Needs_better_patch:  1  |  
+---
Changes (by jbronn):

  * needs_better_patch:  0 => 1
  * stage:  Unreviewed => Ready for checkin
  * version:  1.2-beta => 1.2
  * milestone:  => 1.3

Comment:

 I got an Arch Linux VM set up and got the problem reproduced using
 standard packages and with the code from the tutorial.  This is what I get
 in the logs:
 {{{
 [Wed Jul 07 08:26:48 2010] [error] Exception KeyError:
 KeyError(140158140106560,) in  ignored
 [Wed Jul 07 08:26:48 2010] [error] Exception KeyError:
 KeyError(140158140106560,) in  ignored
 [Wed Jul 07 08:26:48 2010] [error] Exception KeyError:
 KeyError(140158140106560,) in  ignored
 [Wed Jul 07 08:26:48 2010] [error] Exception KeyError:
 KeyError(140158140106560,) in  ignored
 [Wed Jul 07 08:26:48 2010] [error] Exception KeyError:
 KeyError(140158140106560,) in  ignored
 [Wed Jul 07 08:26:48 2010] [error] Exception KeyError:
 KeyError(140158140106560,) in  ignored
 [Wed Jul 07 08:26:48 2010] [error] Exception KeyError:
 KeyError(140158140106560,) in  ignored
 [Wed Jul 07 08:26:48 2010] [error] Exception KeyError:
 KeyError(140158140106560,) in  ignored
 [Wed Jul 07 08:26:48 2010] [error] Exception KeyError:
 KeyError(140158140106560,) in  ignored
 [Wed Jul 07 08:26:48 2010] [error] Exception KeyError:
 KeyError(140158140106560,) in  ignored
 [Wed Jul 07 08:26:48 2010] [error] Exception KeyError:
 KeyError(140158140106560,) in  ignored
 [Wed Jul 07 08:26:48 2010] [notice] caught SIGTERM, shutting down
 [Wed Jul 07 08:26:48 2010] [error] Exception AttributeError: "'NoneType'
 object has no attribute 'destroy_geom'" in
 [Wed Jul 07 08:26:48 2010] [error] Exception AttributeError: "'NoneType'
 object has no attribute 'destroy_geom'" in
 }}}

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Re: [Django] #13488: Exceptions in GEOS I/O object destructor at process exit

[Django]

#13488: Exceptions in GEOS I/O object destructor at process exit
---+
  Reporter:  mro...@arinc.com  | Owner:  jbronn  
Status:  reopened  | Milestone:  
 Component:  GIS   |   Version:  1.2-beta
Resolution:|  Keywords:  gis 
 Stage:  Unreviewed| Has_patch:  1   
Needs_docs:  0 |   Needs_tests:  0   
Needs_better_patch:  0 |  
---+
Comment (by jbronn):

 I use thread-local module-level global I/O objects that developer has no
 control over, thus re-opening.

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Re: [Django] #13488: Exceptions in GEOS I/O object destructor at process exit

[Django]

#13488: Exceptions in GEOS I/O object destructor at process exit
---+
  Reporter:  mro...@arinc.com  | Owner:  jbronn  
Status:  reopened  | Milestone:  
 Component:  GIS   |   Version:  1.2-beta
Resolution:|  Keywords:  gis 
 Stage:  Unreviewed| Has_patch:  1   
Needs_docs:  0 |   Needs_tests:  0   
Needs_better_patch:  0 |  
---+
Changes (by jbronn):

  * status:  closed => reopened
  * resolution:  wontfix =>

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Re: [Django] #13488: Exceptions in GEOS I/O object destructor at process exit

[Django]

#13488: Exceptions in GEOS I/O object destructor at process exit
---+
  Reporter:  mro...@arinc.com  | Owner:  jbronn  
Status:  closed| Milestone:  
 Component:  GIS   |   Version:  1.2-beta
Resolution:  wontfix   |  Keywords:  gis 
 Stage:  Unreviewed| Has_patch:  1   
Needs_docs:  0 |   Needs_tests:  0   
Needs_better_patch:  0 |  
---+
Changes (by Rozza):

  * status:  assigned => closed
  * resolution:  => wontfix

Comment:

 Updated after conversation on the geo_django google group.

 {{{
 #!html
 
 
 The root cause for these problems is the same: the module holding the
 destructor is garbage collected in the dying thread before the geometry
 or I/O object is itself garbage collected (and tries to call the now
 non-existent function).

 To compound the issue, it appears that GC order changes depending on the
 version of Python used, as well as the platform it is running on.  In
 other words, Python 2.7 on Snow Leopard won't show these errors while
 Python 2.5 on Arch Linux will.

 However, for the ticket you opened (#13843), the developer may prevent
 these errors by _not_ creating module-level globals of GEOS geometry
 objects.  Here's an example of a module-level global:


 from django.contrib.gis.geos import GEOSGeometry
 geom = GEOSGeometry('POINT(5 23)')
 def my_view():
 do_something_with(geom)


 Instead of having `geom` defined in the global scope, it would be better
 to have it instantiated in the local scope of the view function instead.

 As it stands I'm -1 on the #13843 patch.  While it reduces log noise
 in your case, it masks that there could be an underlying problem with
 the developer's code.  Regardless, I'm keeping the ticket open because
 absent a technological fix, there should be at least note in the
 documentation on how to avoid it.

 -Justin
 
 
 }}}

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Re: [Django] #13488: Exceptions in GEOS I/O object destructor at process exit

[Django]

#13488: Exceptions in GEOS I/O object destructor at process exit
---+
  Reporter:  mro...@arinc.com  | Owner:  jbronn  
Status:  assigned  | Milestone:  
 Component:  GIS   |   Version:  1.2-beta
Resolution:|  Keywords:  gis 
 Stage:  Unreviewed| Has_patch:  1   
Needs_docs:  0 |   Needs_tests:  0   
Needs_better_patch:  0 |  
---+
Changes (by anonymous):

  * has_patch:  0 => 1

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Re: [Django] #13488: Exceptions in GEOS I/O object destructor at process exit

[Django]

#13488: Exceptions in GEOS I/O object destructor at process exit
---+
  Reporter:  mro...@arinc.com  | Owner:  jbronn  
Status:  assigned  | Milestone:  
 Component:  GIS   |   Version:  1.2-beta
Resolution:|  Keywords:  gis 
 Stage:  Unreviewed| Has_patch:  0   
Needs_docs:  0 |   Needs_tests:  0   
Needs_better_patch:  0 |  
---+
Comment (by Rozza):

 I've added an attachment that handles / catches the dying thread scenario
 and quietly lets the rest in peace.

 I have no idea how I'd write a test to prove it works - but I tested on my
 machine it stops the warnings.

 I based it on how _threading_local.py from in the python library handles
 destruction.

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Re: [Django] #13488: Exceptions in GEOS I/O object destructor at process exit

[Django]

#13488: Exceptions in GEOS I/O object destructor at process exit
---+
  Reporter:  mro...@arinc.com  | Owner:  jbronn  
Status:  assigned  | Milestone:  
 Component:  GIS   |   Version:  1.2-beta
Resolution:|  Keywords:  gis 
 Stage:  Unreviewed| Has_patch:  0   
Needs_docs:  0 |   Needs_tests:  0   
Needs_better_patch:  0 |  
---+
Changes (by proppy):

 * cc: pro...@aminche.com (added)

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Re: [Django] #13488: Exceptions in GEOS I/O object destructor at process exit

[Django]

#13488: Exceptions in GEOS I/O object destructor at process exit
---+
  Reporter:  mro...@arinc.com  | Owner:  jbronn  
Status:  assigned  | Milestone:  
 Component:  GIS   |   Version:  1.2-beta
Resolution:|  Keywords:  gis 
 Stage:  Unreviewed| Has_patch:  0   
Needs_docs:  0 |   Needs_tests:  0   
Needs_better_patch:  0 |  
---+
Changes (by bkonkle):

 * cc: brandon.kon...@gmail.com (added)

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Re: [Django] #13488: Exceptions in GEOS I/O object destructor at process exit

[Django]

#13488: Exceptions in GEOS I/O object destructor at process exit
---+
  Reporter:  mro...@arinc.com  | Owner:  jbronn  
Status:  assigned  | Milestone:  
 Component:  GIS   |   Version:  1.2-beta
Resolution:|  Keywords:  gis 
 Stage:  Unreviewed| Has_patch:  0   
Needs_docs:  0 |   Needs_tests:  0   
Needs_better_patch:  0 |  
---+
Comment (by bkonkle):

 I'm also getting this message upon exit.  I'm running Django on an OS X
 Snow Leopard laptop, using Postgres 8.3, GEOS 3.1.1, Proj 4.7.0, PostGIS
 1.3.6, and GDAL 1.6.3.  We haven't started running Django 1.2 on our
 Ubuntu 8.04 dev server yet, but when we do I'll check to see if the
 message shows up there as well.

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Re: [Django] #13488: Exceptions in GEOS I/O object destructor at process exit

[Django]

#13488: Exceptions in GEOS I/O object destructor at process exit
---+
  Reporter:  mro...@arinc.com  | Owner:  jbronn  
Status:  assigned  | Milestone:  
 Component:  GIS   |   Version:  1.2-beta
Resolution:|  Keywords:  gis 
 Stage:  Unreviewed| Has_patch:  0   
Needs_docs:  0 |   Needs_tests:  0   
Needs_better_patch:  0 |  
---+
Comment (by mro...@arinc.com):

 We are running:
 python: 2.6.5
 django: trunk
 GEOS: 3.2.1
 PostGIS: 3.2.1 (i think)
 OS: Arch linux

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Django 
The Web framework for perfectionists with deadlines.

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Re: [Django] #13488: Exceptions in GEOS I/O object destructor at process exit

[Django]

#13488: Exceptions in GEOS I/O object destructor at process exit
---+
  Reporter:  mro...@arinc.com  | Owner:  jbronn  
Status:  assigned  | Milestone:  
 Component:  GIS   |   Version:  1.2-beta
Resolution:|  Keywords:  gis 
 Stage:  Unreviewed| Has_patch:  0   
Needs_docs:  0 |   Needs_tests:  0   
Needs_better_patch:  0 |  
---+
Changes (by jbronn):

  * summary:  GeoDjango => Exceptions in GEOS I/O object destructor at
  process exit

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