Re: [easybuild] Openblas(foss) matrix issue

2019-05-08 Thread Åke Sandgren
On 5/8/19 7:56 PM, Kenneth Hoste wrote: > Thank you for reporting back on this Thomas! > > It's good to hear that the issue can be resolved by using a newer > version of OpenBLAS, but it's also frustrating... > > This is clearly a bug in OpenBLAS that could have been prevented. > I haven't

Re: [easybuild] Openblas(foss) matrix issue

2019-05-08 Thread Kenneth Hoste
Thank you for reporting back on this Thomas! It's good to hear that the issue can be resolved by using a newer version of OpenBLAS, but it's also frustrating... This is clearly a bug in OpenBLAS that could have been prevented. I haven't studied this issue in detail myself yet, but I have seen

[easybuild] Problem with TensorFlow and the fosscuda toolchain

2019-05-08 Thread Randy Philipp
I am currently having issues with building TensorFlow with the fosscuda toolchain. It appears to be crashing at a different part during the build, here are some examples: easybuild-TensorFlow-1.12.0-20190506.122602.aYbgD.log:ERROR:

Re: [easybuild] CMake fails due to missing 'install' target

2019-05-08 Thread Loris Bennett
Loris Bennett writes: > Dear Kenneth, > > Kenneth Hoste writes: > >> Dear Loris, >> >> On 30/04/2019 11:48, Loris Bennett wrote: >>> Hi, >>> >>> I am trying to write an easyconfig for RAxML-NG and have the following: >>> >>> ##

RE: [easybuild] Openblas(foss) matrix issue

2019-05-08 Thread Thomas Eylenbosch
Hi Jurij I have installed the latest version of OpenBLAS(0.3.6), it the seems the matrix calculations are correct now. Fyi: I am using EasyBuild 3.9.0, so it did not require the https://github.com/easybuilders/easybuild-easyconfigs/pull/8227 patch Met vriendelijke groet / Kind regards /

Re: [easybuild] Openblas(foss) matrix issue

2019-05-08 Thread Mikael Öhman
Hi Jure, Was it these changes? https://github.com/easybuilders/easybuild-easyconfigs/pull/8227 You can already rebuild from that PR, or wait for 3.9.1, so a rebuild is recommended after next release. / Mikael On Wed, May 8, 2019 at 11:04 AM Jure Pečar wrote: > On Tue, 7 May 2019 19:10:10

Re: [easybuild] Openblas(foss) matrix issue

2019-05-08 Thread Jakob Schiøtz
> On 7 May 2019, at 18:12, Thomas Eylenbosch > wrote: > > > Can someone try to reproduce the error with the R/Python(foss/2018b) modules. > Or can someone give me feedback on this? I have tried with Python/3.6.6-foss-2018b both on a Skylake (Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz) and

Re: [easybuild] Openblas(foss) matrix issue

2019-05-08 Thread Jure Pečar
On Tue, 7 May 2019 19:10:10 +0200 Åke Sandgren wrote: > Parts of it may be SkylakeX related. I've recently checked OpenBLAS changelog and saw some adding-removing-adding-removing specific avx512 kernels there. I'd suggest trying the latest OpenBLAS release and see if that fixes issues you're