Hi We’ve also spotted differences on the Jenkins shell under RH, maybe because its shell is not interactive. The profile was not being sourced, so we had to add it to the jenkins script:
source ~/.profile We don’t use Lmod though, not sure this will help. Cheers, -- Guilherme Peretti-Pezzi CSCS - Swiss National Supercomputing Centre From: <easybuild-requ...@lists.ugent.be<mailto:easybuild-requ...@lists.ugent.be>> on behalf of "Siddiqui, Shahzeb" <shahzeb.siddi...@pfizer.com<mailto:shahzeb.siddi...@pfizer.com>> Reply-To: "easybuild@lists.ugent.be<mailto:easybuild@lists.ugent.be>" <easybuild@lists.ugent.be<mailto:easybuild@lists.ugent.be>> Date: Monday 20 February 2017 19:46 To: lmod-users <lmod-us...@lists.sourceforge.net<mailto:lmod-us...@lists.sourceforge.net>> Cc: "easybuild@lists.ugent.be<mailto:easybuild@lists.ugent.be>" <easybuild@lists.ugent.be<mailto:easybuild@lists.ugent.be>> Subject: [easybuild] RE: R-3.3.2-foss-2016.09 module load error Please see the attached file From: Siddiqui, Shahzeb Sent: Monday, February 20, 2017 1:46 PM To: lmod-users Cc: easybuild@lists.ugent.be<mailto:easybuild@lists.ugent.be> Subject: R-3.3.2-foss-2016.09 module load error Hello, I seem to be having issue loading module for R through Jenkins, however when I run it via Command Line, it seems to work. I have no clue why it is not working for this particular module. I have a similar module for R/3.3.2 built with intel and that module works. I can’t figure out what klist error is. Any ideas how to fix this? Shahzeb Siddiqui HPC Linux Engineer B2220-447.2 Groton, CT
