[easybuild] new release of Easy_Update

2019-09-13 Thread Dey, John F
Hello Easybuilders, I am happy to announce a new release of easy_update. This new version fixes some serious issues with the Python dependency checking by using the "setuptools" packaging module. This new version handles the ugliness of PEP 508 dependency specification. If you are maintaining

Re: [easybuild] Singularity 3?

2019-09-13 Thread Loris Bennett
Dear Valentin, I wasn't trying to run the install step either and left the bits you commented out commented out. The problem seems to be that preinstallopts = 'cd build && ' leads to cd build && make install which fails. I thus modified skipsteps to additionally ignore the install

Re: [easybuild] Singularity 3?

2019-09-13 Thread Valentin Plugaru
Dear Loris, We're not running the install step as privileged with sudo from within EasyBuild. That's why in the .eb file there were comments for the 'next steps after installation' that are (a reminder and) taken care of outside of the EB workflow. It may be possible to allow the sudo commands