Structural Equation Modelling for Ecologists and Evolutionary Biologists (SEMR02)
www.prstatistics.com/course/structural-equation-modelling-for-ecologists- and-evolutionary-biologists-semr02/ This course will be delivered by Jon Lefcheck (author of the piecewise package) and will take place at Myuna Bay sport and recreation, Centre, Newcastle, Australia from 18th - 22nd June 2018 Course Overview: The course is a primer on structural equation modelling (SEM) and confirmatory path analysis, with an emphasis on practical skills and applications to real-world data. Structural equation modelling is a rapidly growing technique in ecology and evolution that unites multiple hypotheses in a single causal network. It provides an intuitive graphical representation of relationships among variables, underpinned by well-described mathematical estimation procedures. Several advances in SEM over the past few years have expanded its utility for typical ecological datasets, which include count data, missing observations, and nested or hierarchical designs. We will cover the basic philosophy behind SEM, provide approachable mathematical explanations of the techniques, and cover recent extensions to mixed effects models and non-normal distributions. Along the way, we will work through many examples from the primary literature using the open- source statistical software R (www.r-project.org). We will draw on two popular R packages for conducting SEM, including lavaan and piecewiseSEM. Participants are encouraged to bring their own data, as there will be opportunities throughout the course to plan, analyze, and receive feedback on structural equation models. Sunday 17th Meet at Myuna Bay Sport and Recreation at approximately 18:30 Monday 18th �C Classes from 09:00 to 17:00 Introduction to SEM Module 1: What is Structural Equation Modeling? Why would I use it? Module 2: Creating multivariate causal models Module 3: Fitting piecewise models Readings: Grace 2010 (overview), Whalen et al. 2013 (example) Tuesday 19th �C Classes from 09:00 to 17:00 SEM Using Likelihood Module 4: Fitting Observed Variable models with covariance structures Module 5: What does it mean to evaluate a multivariate hypothesis? Module 6: Latent Variable models Module 7: ANCOVA revisited & Nonlinearities Readings: Grace & Bollen 2005, Shipley 2004 Optional Reading: Pearl 2012, Pearl 2009 (causality) Wednesday 20th �C Classes from 09:00 to 17:00 Piecewise SEM Module 8: Introduction to piecewise approach Module 9: Incorporation of random effects models Model 10: Autocorrelation Reading: Shipley 2009; Lefcheck 2016 Thursday 21st �C Classes from 09:00 to 17:00 Advanced Topics with Likelihood and Piecewise SEM Module 11: Multigroup models and non-linearities Module 12: Composite Variables Module 13: Phylogenetically-correlated data Module 14: Prediction using SEM Module 15: How To Reject A Paper That Uses SEM Readings: Grace & Julia 1999, von Hardenberg & Gonzalez�\Voyer 2013 Friday 22nd �C Classes from 09:00 to 16:00 Open Lab and Final Presentations email oliverhoo...@prstatistics.com with any questions check out our sister sites www.PRstatistics.com www.PRinformatice.com www.PSstatistics.com and our up-comign courses ---------------------------------------------------------------------------- ---------------------------------------------------------------------------- ------------------ 1. February 19th �C 23rd 2018 MOVEMENT ECOLOGY (MOVE01) Margam Discovery Centre, Wales, Dr Luca Borger, Dr Ronny Wilson, Dr Jonathan Potts www.prstatistics.com/course/movement-ecology-move01/ 2. February 19th �C 23rd 2018 GEOMETRIC MORPHOMETRICS USING R (GMMR01) Margam Discovery Centre, Wales, Prof. Dean Adams, Prof. Michael Collyer, Dr. Antigoni Kaliontzopoulou http://www.prstatistics.com/course/geometric-morphometrics-using-r-gmmr01/ ---------------------------------------------------------------------------- ---------------------------------------------------------------------------- ------------------ 3. March 5th - 9th 2018 SPATIAL PRIORITIZATION USING MARXAN (MRXN01) Margam Discovery Centre, Wales, Jennifer McGowan www.prstatistics.com/course/introduction-to-marxan-mrxn01/ 4. March 12th - 16th 2018 ECOLOGICAL NICHE MODELLING USING R (ENMR02) Glasgow, Scotland, Dr. Neftali Sillero http://www.prstatistics.com/course/ecological-niche-modelling-using-r- enmr02/ 5. March 19th �C 23rd 2018 BEHAVIOURAL DATA ANALYSIS USING MAXIMUM LIKLIHOOD IN R (BDML01) Glasgow, Scotland, Dr William Hoppitt http://www.psstatistics.com/course/behavioural-data-analysis-using-maximum- likelihood-bdml01/ ---------------------------------------------------------------------------- ---------------------------------------------------------------------------- ------------------ 6. April 9th �C 13th 2018 NETWORK ANAYLSIS FOR ECOLOGISTS USING R (NTWA02 Glasgow, Scotland, Dr. Marco Scotti www.prstatistics.com/course/network-analysis-ecologists-ntwa02/ 7. April 16th �C 20th 2018 INTRODUCTION TO STATISTICAL MODELLING FOR PSYCHOLOGISTS USING R (IPSY01) Glasgow, Scotland, Dr. Dale Barr, Dr Luc Bussierre http://www.psstatistics.com/course/introduction-to-statistics-using-r-for- psychologists-ipsy01/ 8. April 23rd �C 27th 2018 MULTIVARIATE ANALYSIS OF ECOLOGICAL COMMUNITIES USING THE VEGAN PACKAGE (VGNR01) Glasgow, Scotland, Dr. Peter Solymos, Dr. Guillaume Blanchet www.prstatistics.com/course/multivariate-analysis-of-ecological-communities- in-r-with-the-vegan-package-vgnr01/ 9. April 30th �C 4th May 2018 QUANTITATIVE GEOGRAPHIC ECOLOGY: MODELING GENOMES, NICHES, AND COMMUNITIES (QGER01) Glasgow, Scotland, Dr. Dan Warren, Dr. Matt Fitzpatrick www.prstatistics.com/course/quantitative-geographic-ecology-using-r- modelling-genomes-niches-and-communities-qger01/ ---------------------------------------------------------------------------- ---------------------------------------------------------------------------- ------------------ 10. May 7th �C 11th 2018 ADVANCES IN MULTIVARIATE ANALYSIS OF SPATIAL ECOLOGICAL DATA USING R (MVSP02) CANADA (QUEBEC), Prof. Pierre Legendre, Dr. Guillaume Blanchet www.prstatistics.com/course/advances-in-spatial-analysis-of-multivariate- ecological-data-theory-and-practice-mvsp03/ 11. May 14th - 18th 2018 INTRODUCTION TO MIXED (HIERARCHICAL) MODELS FOR BIOLOGISTS (IMBR01) CANADA (QUEBEC), Prof Subhash Lele www.prstatistics.com/course/introduction-to-mixed-hierarchical-models-for- biologists-using-r-imbr01/ 12. May 21st - 25th 2018 INTRODUCTION TO PYTHON FOR BIOLOGISTS (IPYB05) SCENE, Scotland, Dr. Martin Jones http://www.prinformatics.com/course/introduction-to-python-for-biologists- ipyb05/ 13. May 21st - 25th 2018 INTRODUCTION TO REMOTE SENISNG AND GIS FOR ECOLOGICAL APPLICATIONS (IRMS01) Glasgow, Scotland, Prof. Duccio Rocchini, Dr. Luca Delucchi www.prinformatics.com/course/introduction-to-remote-sensing-and-gis-for- ecological-applications-irms01/ 14. May 28th �C 31st 2018 STABLE ISOTOPE MIXING MODELS USING SIAR, SIBER AND MIXSIAR (SIMM04) CANADA (QUEBEC) Dr. Andrew Parnell, Dr. Andrew Jackson www.prstatistics.com/course/stable-isotope-mixing-models-using-r-simm04/ 15. May 28th �C June 1st 2018 ADVANCED PYTHON FOR BIOLOGISTS (APYB02) SCENE, Scotland, Dr. Martin Jones www.prinformatics.com/course/advanced-python-biologists-apyb02/ ---------------------------------------------------------------------------- ---------------------------------------------------------------------------- ------------------ 16. June 12th - 15th 2018 SPECIES DISTRIBUTION MODELLING (DBMR01) Myuna Bay sport and recreation, Australia, Prof. Jane Elith, Dr. Gurutzeta Guillera www.prstatistics.com/course/species-distribution-models-using-r-sdmr01/ 17. June 18th �C 22nd 2018 STRUCTURAL EQUATION MODELLING FOR ECOLOGISTS AND EVOLUTIONARY BIOLOGISTS USING R (SEMR02) Myuna Bay sport and recreation, Australia, Dr. Jon Lefcheck www.prstatistics.com/course/structural-equation-modelling-for-ecologists- and-evolutionary-biologists-semr02/ 18. June 25th �C 29th 2018 SPECIES DISTRIBUTION/OCCUPANCY MODELLING USING R (OCCU01) Glasgow, Scotland, Dr. Darryl McKenzie www.prstatistics.com/course/species-distributionoccupancy-modelling-using-r- occu01/ ---------------------------------------------------------------------------- ---------------------------------------------------------------------------- ------------------ 19. July 2nd - 5th 2018 SOCIAL NETWORK ANALYSIS FOR BEHAVIOURAL SCIENTISTS USING R (SNAR01) Glasgow, Scotland, Prof James Curley http://www.psstatistics.com/course/social-network-analysis-for-behavioral- scientists-snar01/ 20. July 8th �C 12th 2018 MODEL BASE MULTIVARIATE ANALYSIS OF ABUNDANCE DATA USING R (MBMV02) Glasgow, Scotland, Prof David Warton www.prstatistics.com/course/model-base-multivariate-analysis-of-abundance- data-using-r-mbmv02/ 21. July 16th �C 20th 2018 PRECISION MEDICINE BIOINFORMATICS: FROM RAW GENOME AND TRANSCRIPTOME DATA TO CLINICAL INTERPRETATION (PMBI01) Glasgow, Scotland, Dr Malachi Griffith, Dr. Obi Griffith www.prinformatics.com/course/precision-medicine-bioinformatics-from-raw- genome-and-transcriptome-data-to-clinical-interpretation-pmbi01/ 22. July 23rd �C 27th 2018 EUKARYOTIC METABARCODING (EUKB01) Glasgow, Scotland, Dr. Owen Wangensteen http://www.prinformatics.com/course/eukaryotic-metabarcoding-eukb01/ ---------------------------------------------------------------------------- ---------------------------------------------------------------------------- ------------------ -- Oliver Hooker PhD. PR statistics 2017 publications - Ecosystem size predicts eco-morphological variability in post-glacial diversification. Ecology and Evolution. In press. The physiological costs of prey switching reinforce foraging specialization. Journal of animal ecology. prstatistics.com facebook.com/prstatistics/ twitter.com/PRstatistics groups.google.com/d/forum/pr-statistics-post-course-forum prstatistics.com/organiser/oliver-hooker/ 6 Hope Park Crescent Edinburgh EH8 9NA +44 (0) 7966500340
