Re: [O] parse #+MYVAR?

maybe this post: http://kitchingroup.cheme.cmu.edu/blog/2013/05/05/Getting-keyword-options-in-org-files/is close what you are looking for. you have to figure out how to go through all the buffers,but the code here should do the parsing for you. John --- John

Re: [O] Source code to check URLs in an org mode document?

a request to the url to see if it is valid. John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu On Fri, Apr 4, 2014 at 10:23 PM

Re: [O] Insert UUID with org-insert-todo-heading

the heading by hand. org-insert-heading-hook you can probably write a little function that sets a uuid property. John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http

Re: [O] Trouble with Tables and Python

that do what I want, e.g. changing raw to org results in the section being wrapped in #+begin_org/end_org, which is usually not what I want. I usually do want the raw output. I hope that clarifies where some of your differences might be coming from. John --- John

Re: [O] babel and long-running computations

this is a highly customized approach to a very specific code, but you could adapt the ideas to other codes and computing environments I think. John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon

Re: [O] Embedding an image in base64; exporting to ascii, html, and latex?

I wrote some code that does some of this here: http://kitchingroup.cheme.cmu.edu/blog/2014/03/05/Creating-a-transportable-zip-archive-of-an-org-file/ It doesn't do anything fancy like you describe, but it does get images and files into the zip file. John --- John

Re: [O] babel and long-running computations

On Sat, Apr 19, 2014 at 5:49 PM, Christoph Groth christ...@grothesque.orgwrote: The following message is a courtesy copy of an article that has been posted to gmane.emacs.orgmode as well. Thank you, John, for your detailed reply. we routinely do this, in the following way. We run jobs that

Re: [O] babel and long-running computations

You are describing what I see as a need to run processes asynchronously. We use the Torque queue system for this. It takes care of scheduling and running jobs on a cluster. On Thu, Apr 17, 2014 at 6:52 AM, Christoph Groth christ...@grothesque.orgwrote: Hi Julian, Generally, org-babel is

[O] latex export of \ce question

is not. The nested {} seems to mess it up. Is there a way to get this to export correctly? thanks, John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http

Re: [O] latex export of \ce question

Thanks. I was going crazy looking for the snippet syntax! On Tue, Apr 22, 2014 at 8:32 AM, Rasmus ras...@gmx.us wrote: #+MACRO: ce @@latex:ce($1)@@ @@latex:ce{ABO_{3-\delta}}@@ {{{ce(ABO_{3-\delta})}}} John --- John Kitchin Associate Professor

Re: [O] To interrupt org-latex-pdf-process to regexp-replace some string of the .tex intermediate file and continue to export

\\)}) \\1{\\3} tex-contents) John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] To interrupt org-latex-pdf-process to regexp-replace some string of the .tex intermediate file and continue to export

line minus the .png. then you need to manually build the latex file if you want the pdf. I am not sure what an ebb file is, or what the difference in latex vs xelatex is. https://github.com/jkitchin/jmax/blob/master/ox-manuscript.el John --- John Kitchin

Re: [O] To interrupt org-latex-pdf-process to regexp-replace some string of the .tex intermediate file and continue to export

to build your latex file with extensions removed, bibliography replaced, and open the pdf through the regular org-mode export menu. This may be more helpful than trying to do the steps manually as I described. John --- John Kitchin Associate Professor Doherty Hall A207F

Re: [O] latex export of \ce question

--- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] State of the art in citations

or odt I suspect. Anyway, there are some very interesting ideas in this code, and I am using it on a pretty regular basis. Maybe some of you would also find them interesting/helpful. I look forward to see this continue developing! John --- John Kitchin Associate

[O] org-ref code

functions I find useful. I think it is a standalone package now. I would be grateful if anyone tried it, and let me know if it does not work as advertised ;) John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon

Re: [O] org-ref code

Thanks for the feedback. I moved the key-bindings for f10-12 out of org-ref. On Thu, May 1, 2014 at 6:01 AM, Eric S Fraga e.fr...@ucl.ac.uk wrote: John, I've been playing with the package although, so far, only for citations. A few points: 1. Do you have any support for choosing the type

Re: [O] org-ref code

sorry, premature send! On Thu, May 1, 2014 at 8:36 AM, John Kitchin jkitc...@andrew.cmu.eduwrote: Thanks for the feedback. I moved the key-bindings for f10-12 out of org-ref. On Thu, May 1, 2014 at 6:01 AM, Eric S Fraga e.fr...@ucl.ac.uk wrote: John, I've been playing with the package

Re: [O] org-ref code

Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu On Thu, May 1, 2014 at 9:30 AM, Eric S Fraga e.fr...@ucl.ac.uk wrote: On Thursday, 1 May 2014 at 08:47, John Kitchin

Re: [O] First attempt at exporting to PDF.

-interaction nonstopmode -output-directory %o %b pdflatex -shell-escape -interaction nonstopmode -output-directory %o %b)) I do not think org-mode runs bibtex by default. After that you should see the references. John --- John Kitchin Associate Professor Doherty Hall

Re: [O] Change default latex packages

) ( underscore t) (linktocpage,pdfstartview=FitH,colorlinks, linkcolor=blue,anchorcolor=blue, citecolor=blue,filecolor=blue,menucolor=blue,urlcolor=blue hyperref nil) ( attachfile nil))) John --- John Kitchin Associate Professor Doherty Hall A207F

Re: [O] Change default latex packages

Isn't that what it is supposed to be like? what were you expecting differently? John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http

Re: [O] Change default latex packages

) (linktocpage,pdfstartview=Fit H,colorlinks, linkcolor=blue,anchorcolor=blue, citecolor=blue,filecolor=blue,menucolor=blue,urlcolor=blue hyperref nil) ( attachfile nil))) John --- John Kitchin Associate Professor Doherty Hall A207F Department

Re: [O] org-ref code

for writing papers, so I anticipate by this fall it will be pretty stable. John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] How to tangle?

that is pretty strange. I just tried it and got Tangled 51 code blocks from org-ref.org You can run the command `org-babel-tangle' with C-c C-v t You could also try: [[elisp:(org-babel-load-file org-ref.org)]] John --- John Kitchin Associate Professor Doherty

Re: [O] org-ref code

On Sat, May 10, 2014 at 10:44 AM, Eric S Fraga e.fr...@ucl.ac.uk wrote: On Thursday, 1 May 2014 at 13:07, John Kitchin wrote: I implemented some of this partially. I made it so you can specify the default cite link in a user variable, with a default of cite. When you type C-c

Re: [O] org-ref code

that should work out of the box, and that link is defined in org-ref as (org-add-link-type cite 'org-ref-cite-onclick-minibuffer-menu 'org-ref-cite-link-format) I am not sure why it would not work out of the box. John --- John Kitchin Associate Professor

Re: [O] org-ref code

}? John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu On Mon, May 12, 2014 at 4:12 AM, Andreas Reuleaux andr...@a-rx.info wrote

Re: [O] org-ref code

machinery to insert citations. I made a little screencast here: http://screencast.com/t/bxfafVydE j John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http

Re: [O] org-ref code

. John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu On Tue, May 13, 2014 at 4:11 PM, Eric S Fraga e.fr...@ucl.ac.uk wrote

Re: [O] org-ref code

the manual additions unless you manually define the link like you did with org-add-link-type. John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http

Re: [O] org-ref code

I think you are restricted to single characters. That key is used by reftex, so it would be a limitation in reftex. You can always define your own function with a key-binding for something specific. John --- John Kitchin Associate Professor Doherty Hall A207F

Re: [O] org-ref code

setup all the time, but it might help figure out what is different with your setup. For Macs or Linux, you just need to run something like emacs -q -l path/to/jmax/init.el to try it out. John --- John Kitchin Associate Professor Doherty Hall A207F Department

Re: [O] org-ref code

--- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu On Wed, May 14, 2014 at 2:17 PM, Eric S Fraga e.fr...@ucl.ac.uk wrote: On Tuesday, 13 May 2014 at 20:28, John

Re: [O] org-ref code

that is making it look for a TeX-master or something, which eventually results in nil, which is failing here: re-search-forward(nil 10001 t). Or maybe you need to set something to turn that off. Perhaps some default changed? John --- John Kitchin Associate Professor

Re: [O] org-ref code

worlds (org and latex) I don't think I have done anything to make the naked links work. John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http

Re: [O] org-ref code

yes, I am using emacs 24.3. John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu On Thu, May 15, 2014 at 9:30 AM, Eric S

Re: [O] org-ref for biblatex

if it does what you need? John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu On Sun, May 18, 2014 at 1:16 PM, Andreas

Re: [O] org-ref for biblatex

good news, I think org-ref works with biblatex pretty well now, see http://kitchingroup.cheme.cmu.edu/blog/2014/05/19/Exporting-citations-with-biblatex/ org-ref also makes a reasonable html bibliography now too! John --- John Kitchin Associate Professor Doherty

Re: [O] Org mode links for helm

your links in. I think you could do something like that with #+name. John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] latex markup in org?

, and type C-c C-c. that should do what you want. John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu On Sun, Jun 1, 2014

Re: [O] Writing .el files for org in org?

--- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu On Thu, May 22, 2014 at 7:04 AM, Bastien b...@gnu.org wrote: Rainer M Krug rai

Re: [O] copying files in the links while exporting to html

://kitchingroup.cheme.cmu.edu. I wrote about doing some of this here: http://kitchingroup.cheme.cmu.edu/blog/2013/09/28/Changing-links-to-files-so-they-work-in-a-blog/ It may not be what you want, but it might help you build your code. I hope it helps! John --- John Kitchin

[O] org-contacts email completion by tags

of org-contacts? That search works fine with C-c am. Thanks, John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] org-contacts email completion by tags

email)) ,))) John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] org-contacts email completion by tags

end))) (or ;; I added the next line (org-contacts-complete-tags start end string) (org-contacts-complete-group start end string) (org-contacts-complete-name start end string)) -- --- John Kitchin Professor Doherty

[O] set TO as a property on a heading

TO. In file completion it is something like C-f, is there something similar for this scenario? Thanks, -- --- John Kitchin

Re: [O] set TO as a property on a heading

-- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] set TO as a property on a heading

Yes! That (C-j) is exactly what does it. and it is ido enabled. Thanks, it was driving me crazy! Rasmus ras...@gmx.us writes: John Kitchin jkitc...@andrew.cmu.edu writes: I feel a little silly asking this, but I cannot figure out how to do it. I want to create a property called

[O] org-ref in action

me know if you find any bugs! Thanks, -- --- John Kitchin

Re: [O] org-ref in action

and bbdb. They both serve similar needs, but with different data sources, and different ways to think about it. We might be able to figure out a way to specify a backend that would allow the independent features to work in both though. John --- John Kitchin Associate

Re: [O] org-ref in action

to do, but there are a lot of good ideas in it (imho of course ;) John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] An Org centric research lab: Goodbye MS word, excel, and powerpoint

contributors for creating such an awesome research tool. Cheers, M -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] emails written in Org Mode

using Org Mode. I see you use gnus. I use mu4e[1]. I wonder if your setup is gnus-specific or might work with other emacs mail clients. Will you provide some information about this? Thanks, -k. [1] http://www.djcbsoftware.nl/code/mu/mu4e.html -- --- John

Re: [O] An Org centric research lab: Goodbye MS word, excel, and powerpoint

Best Wishes, M On Jul 9, 2014, at 3:08 PM, John Kitchin jkitc...@andrew.cmu.edu wrote: That is great! Congratulations, and thanks for sharing. I have also converted my group into an org-centric group. Did you find many challenges in implementing this in your group? Doyley, Marvin M. mdoy

Re: [O] How to call org-display-inline-images so that after a graphviz block is evaluated the image is refreshed?

That is a nice tip! -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

[O] proposal to make C-c C-c not remove latex overlays

) (if org-latex-fragment-image-overlays (org-remove-latex-fragment-image-overlays) (org-preview-latex-fragment arg))) #+END_SRC could be added. Any thoughts? -- --- John Kitchin Professor

Re: [O] key collision for auto completion

are appreciated. In particular, what command is M-tab supposed to be bound to for auto completion for the special symbols? Thanks. Shiyuan -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh

Re: [O] emails written in Org Mode

discussions inside gnus, so I'd really like to try this. -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] proposal to make C-c C-c not remove latex overlays

to execute source blocks rather than C-c C-c. Like this? (setq org-babel-no-eval-on-ctrl-c-ctrl-c +1) -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http

Re: [O] proposal to make C-c C-c not remove latex overlays

-it)) #+END_SRC maybe because that is a buffer local variable? Hi John, 2014ko uztailak 14an, John Kitchin-ek idatzi zuen: I am using org-mode files with equations and code blocks in lectures, and it is problematic that C-c C-c removes the equation overlays when running a code block. First

Re: [O] proposal to make C-c C-c not remove latex overlays

it seriously.” --Thompson On Tue, Jul 15, 2014 at 4:00 PM, John Kitchin jkitc...@andrew.cmu.edu wrote: I actually love C-c C-c to run code blocks! Maybe I should just bind it to f5 or something, I am just so used to C-cC-c now! Grant Rettke g...@wisdomandwonder.com writes: On Mon, Jul 14, 2014 at 7

Re: [O] proposal to make C-c C-c not remove latex overlays

DOH! thanks, that is exactly what I forgot to do. This works fine after you activate it! Thanks. Nick Dokos ndo...@gmail.com writes: John Kitchin jkitc...@andrew.cmu.edu writes: Aaron Ecay aarone...@gmail.com writes: Thanks for the advice idea, that is a nice one. It doesn't work for me

Re: [O] proposal to make C-c C-c not remove latex overlays

all, John Kitchin jkitc...@andrew.cmu.edu writes: I am using org-mode files with equations and code blocks in lectures, and it is problematic that C-c C-c removes the equation overlays when running a code block. First, you have to press C-c C-c twice to run the block, since the first one

Re: [O] What is the best in-Emacs presentation mode for org-files today?

and navigating through an Emacs buffer is often good enough for presentations. -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] A gentle introduction to Emacs Org-mode?

, the odds are greater to understand what and why. As for a gentle introduction with a wide scope on EOm, I don't think there is such a thing... sadly. Good luck to your friend! -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical

Re: [O] What is the best in-Emacs presentation mode for org-files today?

Thorsten Jolitz tjol...@gmail.com writes: yes, you should be able to use org-babel-tangle to extract the .el file. Sorry for leaving that detail out! Nicolas Richard theonewiththeevill...@yahoo.fr writes: Thorsten Jolitz tjol...@gmail.com writes: John Kitchin jkitc...@andrew.cmu.edu writes

Re: [O] A gentle introduction to Emacs Org-mode?

instead of an equal sign (=). Best, Jorge. -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] Writing .el files for org in org?

--- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu On Sun, Jul 27, 2014 at 5:50 PM, Bastien b...@gnu.org wrote: Hi John and Rainer, Rainer M Krug rai

Re: [O] Where is the git master branch?

'. -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] [RFC] Rewrite `org-entry-properties' using parser

multiple subjects. There are workarounds, but it would be helpful if user properties could be multivalued. I don’t know if this is feasible given the current codebase; when I looked into it, it seemed pretty difficult. best, Erik -- --- John Kitchin Professor

Re: [O] org-ref in action

https://u.fsf.org/yw) -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] org-ref in action

--- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu On Wed, Aug 6, 2014 at 6:54 AM, Xebar Saram zelt...@gmail.com wrote: Thanks John No worries :) ive installed

Re: [O] Large numbers of named variables in Babel

, BrettW -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

[O] org-8 manual on Amazon!

I saw on twitter today the org mode 8 manual is available on Amazon today: http://www.amazon.com/dp/9881327709/. It looks like it covers Org 8.2. -- --- John Kitchin http://kitchingroup.cheme.cmu.edu

Re: [O] Manipulating Dates Automatically in a Headline

not at all sure how to do it. i would really appreciate any guidance. thanks! Matt -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] How to represent this in Org-mode

might be turned into links to the prerequisites in each module or something like that. Thanks anyway, -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http

[O] exporting org to org with link transforms?

, -- --- John Kitchin http://kitchingroup.cheme.cmu.edu

[O] org-babel with Matlab on windows?

Is anyone using Matlab with org-babel on Windows successfully? If so, how did you do it? -- --- John Kitchin http://kitchingroup.cheme.cmu.edu

Re: [O] Manipulating Dates Automatically in a Headline

in the last sibling headline, or the parent headline. It seems to me this ought to be possible, but I'm not at all sure how to do it. i would really appreciate any guidance. thanks! Matt -- --- John Kitchin Professor Doherty Hall A207F Department

Re: [O] How can I calculate the age of a headline?

in days to today. Is that possible with org-mode already? Could I display this information in a tabular agenda view in a column? Kind regards Martin -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon

[O] bug in org-babel emacs-lisp output?

should be caught, and a default of raw should be output when a table cannot be made? right now my workaround is specifying the :results raw when I hit these situations, but it doesn't seem right. -- --- John Kitchin http://kitchingroup.cheme.cmu.edu

[O] org-project or something like it?

. It seems to have some good capabilities for project navigation, but not the org-capabilities I am thinking of. Is anyone already doing anything that sounds like this? Thanks, -- --- John Kitchin Professor

Re: [O] org-ref no key found

-- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] org-ref no key found

and get my .bib file opened. Julian John Kitchin writes: Julian M. Burgos jul...@hafro.is writes: If you click on the bibliography link to open the file, and then go back to your org-file, do the cite links work? I suspect the notes problem is related to the no key found problem. Hello

[O] progress indicator for code blocks?

it doesn't quite do anything useful. What I would really like is an hourglass or some spinning thing. Does anyone know how to get that (in a cross-platform way)? -- --- John Kitchin http://kitchingroup.cheme.cmu.edu

Re: [O] progress indicator for code blocks?

John Kitchin jkitc...@andrew.cmu.edu writes: I am currently using this bit of advice to change the color of code blocks while they are being executed so there is a visual hint something is happening. ;; give us some hint we are running (defadvice org-babel-execute-src-block (around progress nil

Re: [O] Babel more verbose?

. Is there anything like that available? An option perhaps? -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] progress indicator for code blocks?

the evaluation is still running - would your snippet still work? Rainer John Kitchin jkitc...@andrew.cmu.edu writes: John Kitchin jkitc...@andrew.cmu.edu writes: I am currently using this bit of advice to change the color of code blocks while they are being executed so there is a visual

Re: [O] Babel more verbose?

(org-element-property :begin (org-element-at-point)) (org-element-property :end (org-element-at-point) (overlay-put ol 'face '(foreground-color . blue)) ad-do-it (delete-overlay ol))) #+END_SRC John Kitchin jkitc...@andrew.cmu.edu writes: Try

[O] help debugging latex-overlays boxes

to figure out what the issue is. These are Windows laptops that were preconfigured by the department. Almost all of them work fine, except for this small number I cannot figure out. Any ideas? Thanks, -- --- John Kitchin http://kitchingroup.cheme.cmu.edu

Re: [O] help debugging latex-overlays boxes

Nick Dokos ndo...@gmail.com writes: Thanks for the tips. It is possible minted is the culprit. I will give that a try, and the other ideas too. I am sure it is using dvipng, and that it works. It will be a nice adventure in more sophisticated debugging ;) John Kitchin jkitc...@andrew.cmu.edu

Re: [O] help debugging latex-overlays boxes

chomped to what looks like an old DOS format. Anyway, latex cannot handle that path, so no dvi is produced, and no image. otherwise the latex file is produced, and it compiles fine with the full path. Any ideas on how to fix that? Thanks, John Kitchin jkitc...@andrew.cmu.edu writes: Hi All

Re: [O] help debugging latex-overlays boxes

/Temp)) which gives it a full path. It is pretty odd. There are about 50 students with nominally the same computers in this class, but this issue seems to only affect about 20% of them! John Kitchin jkitc...@andrew.cmu.edu writes: Nick Dokos ndo...@gmail.com writes: I have traced my problem

Re: [O] Managing articles in orgmode and collaboration

bibtex entries for books from the web, given some info (title, year, author or so)? -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] help debugging latex-overlays boxes

Nick Dokos ndo...@gmail.com writes: John Kitchin jkitc...@andrew.cmu.edu writes: Nick Dokos ndo...@gmail.com writes: I have traced my problem. The issue is in the function org-preview-latex-fragment. At the end of the function, where it calls org-format-latex, the default-directory

Re: [O] org-ref no key found

- Julian M. Burgos writes: John, for some weird reason everything seems to be working now. Thanks for your help... I will let you know if I break it again. John Kitchin writes: that is odd. this means org-ref

Re: [O] emailing agenda view

your agenda, and then fill in email addresses and subject, and send. Is there anyway to email the agenda view to a list f recipients? Thank you, Ken -- You will be divorced within a year. -- --- John Kitchin Professor Doherty Hall A207F Department

Re: [O] org-ref no key found

wriong faces when I reopen the file. Does this makes sense? Do you know what could be the issue? Many thanks again, Julian Julian M. Burgos writes: Excellent! Many thanks... now it works like a charm. John Kitchin writes: No problem. Thanks for the tips to replicate this. It was pretty

[O] error exporting with reference to table in another file

, -- --- John Kitchin http://kitchingroup.cheme.cmu.edu

  1   2   3   4   5   6   7   8   9   10   >