Re: [O] Treat custom environment as verbatim on export

2015-05-25 Thread Jacob Gerlach
Hello, On Sun, May 24, 2015 at 3:43 PM, Charles C. Berry ccbe...@ucsd.edu wrote: Currently, :wrap allows this: #+begin_src emacs-lisp :wrap src latex :wrap my-verbatim :exports results ... This is sufficient for my use case. Thanks for the tip. A special block :raw parameter, as Rasmus

[O] Treat custom environment as verbatim on export

2015-05-22 Thread Jacob Gerlach
Hello, I want to use a one of several custom environments for some babel results using, for example, :wrap myverbatim as a header argument. (Since I have several possible environments, I think I need to use :wrap rather than, say, replacing verbatim using an export filter). However, since this

[O] Export code and results in one environment

2015-05-21 Thread Jacob Gerlach
Hello, I'd like to export a source block and it's results together in one latex environment. I came up with a solution using the final filter below. Is there a better way? Thanks, Jake #+BEGIN_SRC emacs-lisp :exports none :results silent (defun combine-verb-final-filter (s backend info)

[O] org-latex-custom-lang-environments

2015-05-19 Thread Jacob Gerlach
Hello, I thought I had successfully used this variable, but after restarting emacs, I can no longer reproduce the documented behavior. Given the following org file: -- #+BEGIN_SRC sh :exports code echo Hello #+END_SRC # Local Variables: # org-latex-listings: t #

Re: [O] org-latex-custom-lang-environments

2015-05-19 Thread Jacob Gerlach
Hello, On Tue, May 19, 2015 at 11:29 AM, Rasmus ras...@gmx.us wrote: If I explicitly eval: (org-babel-do-load-languages 'org-babel-load-languages '((sh . t))) (setq org-latex-custom-lang-environments '((sh myverbatim)) org-latex-listings t) And export #+BEGIN_SRC sh

[O] [Bug?] Smart quotes and latex environments

2015-04-30 Thread Jacob Gerlach
Hello, -- #+OPTIONS: ':t \begin{myenvironment} Foo \end{myenvironment} -- Exports Foo rather than ``foo''. Is this expected? I tried this instead: -- #+Latex:\begin{myenvironment} Foo

[O] [Bug?] Link fontification in captions

2015-04-29 Thread Jacob Gerlach
Hello, A link in a caption: #+CAPTION: [[link]] Initially receives org-link face when I type it. After some action (moving to the next line or saving the buffer), it is redrawn with org-block face. In neither case does [[ and ]] receive the invisibility attribute typically given to links. In

[O] Restart tablenote numbering by section?

2015-04-28 Thread Jacob Gerlach
Hello, Latex export explicitly specifies the footnote number when using \footnotetext for a footnote in a table: --- | One[fn:1] | * Footnotes [fn:1] Footnote in the table --- becomes: ---

Re: [O] [BUG?] Blank line required between text and short caption

2015-04-27 Thread Jacob Gerlach
On Mon, Apr 27, 2015 at 4:29 PM, Nicolas Goaziou m...@nicolasgoaziou.fr wrote: No, it is a genuine bug from parser. This should be fixed in eb77fed33fa0306ebed2224f7895b688320847b2. Confirmed that it is fixed. Thank you. Regards, Jake

[O] [BUG?] Blank line required between text and short caption

2015-04-27 Thread Jacob Gerlach
Hello, Is it required by org syntax to separate short captions from body text? In the following example: * ECM Some text that introduces this table. #+CAPTION[Short caption]: #+CAPTION: Longer caption | Foo | Latex export

Re: [O] [RFC] Repeat Heading movement commands

2015-03-29 Thread Jacob Gerlach
On Sun, Mar 29, 2015 at 4:05 PM, Kyle Meyer k...@kyleam.com wrote: With org-use-speed-commands set to t, this could be C-c C-p p p. Well, this is much better. Should have thought to check the info, of course there's already something like this built in... On Sun, Mar 29, 2015 at 4:09 PM, John

[O] [RFC] Repeat Heading movement commands

2015-03-29 Thread Jacob Gerlach
Hi List, I often find myself wanting to move up by several headings: C-c C-p, C-c C-p, C-c C-p... (I don't usually know ahead of time how many I want to move, so I can't use a numeric prefix arg) I like how `set-mark-command' works with non-nil `set-mark-repeat-pop' to avoid the need to repeat

Re: [O] :ignoreheading: works with LaTeX export, but not HTML

2015-03-27 Thread Jacob Gerlach
On Fri, Mar 27, 2015 at 6:53 AM, Nicolas Goaziou m...@nicolasgoaziou.fr wrote: :ignoreheading: is a feature implemented in ox-beamer.el only. This is not a common feature for all back-ends. IIUC, this question is about performance of the filter shown in the OP, not about the built in feature in

Re: [O] Possible bug: Can not search for text in links - only description

2015-03-23 Thread Jacob Gerlach
On Mon, Mar 23, 2015 at 8:45 AM, Rainer M Krug rai...@krugs.de wrote: First I must say it makes sense to give the error message, although I was quite surprised. But the message should contain a string one can easily search for. And I guess the most used search function is C-s I think the

Re: [O] Possible bug: Can not search for text in links - only description

2015-03-21 Thread Jacob Gerlach
On Sat, Mar 21, 2015 at 7:34 PM, Alexis flexibe...@gmail.com wrote: On 2015-03-21T01:59:07+1100, Richard Lawrence richard.lawre...@berkeley.edu said: RL I am not sure if this counts as a bug or not, so someone else RL should still address this question. Maybe this is the desired RL

Re: [O] Possible bug: Can not search for text in links - only description

2015-03-20 Thread Jacob Gerlach
On Fri, Mar 20, 2015 at 9:44 AM, Rainer M Krug rai...@krugs.de wrote: Hi I got an error as follow when I tried to export: , | org-babel-exp process R at line 5495... | Evaluation of this R code-block is disabled. | user-error: Unable to resolve link *uLELFit ` I thought OK -

Re: [O] Possible bug: Can not search for text in links - only description

2015-03-20 Thread Jacob Gerlach
org-show-context-detail may also be relevant: org-show-context-detail is a variable defined in `org.el'. Its value is ((isearch . lineage) (bookmark-jump . lineage) (default . ancestors)) Documentation: Alist between context and visibility span when revealing a location. Some actions may

[O] [RFC][PATCH] Store links to named elements

2015-03-18 Thread Jacob Gerlach
names? Regards, Jake [1] http://permalink.gmane.org/gmane.emacs.orgmode/91935 From f1166d30ccabdb208b0263d87fd9366fa9a2f325 Mon Sep 17 00:00:00 2001 From: Jacob Gerlach jacobgerl...@gmail.com Date: Wed, 18 Mar 2015 09:58:00 -0400 Subject: [PATCH] Add support to link to named elements * lisp

Re: [O] [RFC] [PATCH] Warn about unexpanded macros on export

2015-03-18 Thread Jacob Gerlach
On Tue, Mar 17, 2015 at 6:38 PM, Nicolas Goaziou m...@nicolasgoaziou.fr wrote: (re unresolved ID links) See e0b19dedb99d3c01199a159a2da8f9aa4adb2f6f Updated fuzzy link patch attached. Applied (with minor tweaks). Thank you. Thanks for the changes. I had some issues using the error messages to

Re: [O] [RFC] [PATCH] Warn about unexpanded macros on export

2015-03-17 Thread Jacob Gerlach
be `user-error' instead of `error'. OK. Updated fuzzy link patch attached. Regards, Jake [1] http://thread.gmane.org/gmane.emacs.orgmode/96017 From a9221500b721a501f7b7f05519dfc0d6f30f23d0 Mon Sep 17 00:00:00 2001 From: Jacob Gerlach jacobgerl...@gmail.com Date: Wed, 11 Mar 2015 22:39:11 -0400 Subject

Re: [O] [PATCH] Internal Links with Spaces

2015-03-12 Thread Jacob Gerlach
On Tue, Mar 10, 2015 at 3:47 PM, Jacob Gerlach jacobgerl...@gmail.com wrote: After finally getting this function to work, I discovered that I had the same problem as when I used org-id: the link description causes exported latex references to use the headline text instead of the \label

[O] Resolving Test Failures

2015-03-11 Thread Jacob Gerlach
Hi List, I'm trying to write a patch and getting test failures from `make test'. The backtrace on the command line is hard for me to parse. If I try running ert interactively by: M-x load-file org-test.el M-x load-file test-ox.el M-x ert RET applicable/test It reports that the test passes. Do

Re: [O] [RFC] [PATCH] Warn about unexpanded macros on export

2015-03-11 Thread Jacob Gerlach
provide a similar patch for org-export-resolve-id-link. Example, foo.org: [[id:points-nowhere]] [[id:this-one-too][also bad]] Exports (latex) to: \url{foo.org} \href{foo.org}{also bad} Regards, Jake From 20f84420a84997fc0e15df5af2e65b3cfde87ac1 Mon Sep 17 00:00:00 2001 From: Jacob Gerlach

Re: [O] [PATCH] Internal Links with Spaces

2015-03-11 Thread Jacob Gerlach
On Wed, Mar 11, 2015 at 10:17 AM, Nicolas Goaziou m...@nicolasgoaziou.fr wrote: This is where I don't follow you. You can insert links without description, using `org-insert-link'. What makes you think you cannot? I thought that I had tested `(org-insert-link nil nil )' and found that a

Re: [O] [PATCH] Internal Links with Spaces

2015-03-11 Thread Jacob Gerlach
Hi, On Wed, Mar 11, 2015 at 9:41 AM, Nicolas Goaziou m...@nicolasgoaziou.fr wrote: I'm not sure to understand the problem you're trying to solve. Would you mind giving a simple example and motivation? (Did I break the thread by adding [PATCH] to the subject? Apologies if so, original thread was

Re: [O] Internal Links with Spaces

2015-03-10 Thread Jacob Gerlach
for this? On Mon, Mar 9, 2015 at 4:50 PM, Jacob Gerlach jacobgerl...@gmail.com wrote: When exploring this, I found the function org-id-store-link. This seemed like what I wanted - it creates a custom ID if one doesn't exist, but it doesn't actually store a link (or at least, it wasn't available when I

Re: [O] Internal Links with Spaces

2015-03-10 Thread Jacob Gerlach
On Tue, Mar 10, 2015 at 12:12 PM, John Kitchin jkitc...@andrew.cmu.edu wrote: As far as I know you have only two options to use refs to a headline in Latex export. 1) Use a CUSTOM_ID property on a heading and then use [[#your-custom-id]] as your link. You have to put relevant text in like:

[O] Internal Links with Spaces

2015-03-09 Thread Jacob Gerlach
Hi List, I'd like to re-raise the issue discussed here http://comments.gmane.org/gmane.emacs.orgmode/79902. In short, storing and inserting an internal link to a headline containing spaces using org-store-link and org-insert-link causes export to fail because the space is hexified into %20. It

Re: [O] Internal Links with Spaces

2015-03-09 Thread Jacob Gerlach
On Mon, Mar 9, 2015 at 10:38 AM, Leo Ufimtsev lufim...@redhat.com wrote: On the side, if of any help: I generally use ID's for linking to headings. The benefit is that headings can be re-named safley and links still work. A great suggestion. I wasn't aware of the feature, and renaming safety

[O] Escape individual underscore?

2015-03-03 Thread Jacob Gerlach
Hi List, I want to include a literal underscore in LaTeX export, like FOO_BAR. Right now I get: FOO$_{\text{BAR}}$ Contrary to this stackexchange question http://stackoverflow.com/a/12753930/3371623, if I try to escape the underscore with a backslash, I get: FOO$\backslash$$_{\text{BAR}} I've

Re: [O] Latex code before maketitle

2015-02-12 Thread Jacob Gerlach
On Wed Feb 11 2015 at 4:01:47 PM Rasmus ras...@gmx.us wrote: Maybe something like AfterPreamble, AfterEndPreamble, AtEndPreamble etc. from etoolbox? Ah, a Latex solution to an Org problem. I was looking for a final filter and didn't realize it, but used your approach before I saw Chuck's

[O] Latex code before maketitle

2015-02-11 Thread Jacob Gerlach
Hi List, I am using a custom Latex class that requires some code between \begin{document} and \maketitle. It seems from looking at ox-latex.el that there is nothing between document start and title command available for me to customize. I suppose I could customize the title command to include

Re: [O] Large LaTeX project in single file or using publishing

2014-11-28 Thread Jacob Gerlach
(pdf) export to fail if it includes a link that is out of scope. Nevertheless, I may come back to this and adjust the behavior if I end up having problems with export time. On Thu, Nov 27, 2014 at 2:51 AM, Marcin Borkowski mb...@wmi.amu.edu.pl wrote: On Wednesday, 26 Nov 2014 at 19:00, Jacob

[O] Large LaTeX project in single file or using publishing

2014-11-26 Thread Jacob Gerlach
Hello list, I'm starting writing my thesis, for which I hope to remain in org-mode rather than regular LaTeX. I am working on adapting a thesis LaTeX template into org-mode. The template is set up with a main.tex having several individual files (chapters, appendices, etc) \include'd. I believe

Re: [O] Best way to include references/license

2014-11-05 Thread Jacob Gerlach
On Wed Nov 05 2014 at 4:22:06 AM Julien Cubizolles j.cubizol...@free.fr wrote: Bracket links (like link) create a \texttt{} \hypertarget{} pair instead of a \label{} \ref{} pair in the latex file. Should I go with explicit \label{} \ref{} in the org file ? The \texttt{} is probably because

Re: [O] Best way to include references/license

2014-11-05 Thread Jacob Gerlach
On Wed, Nov 5, 2014 at 9:11 AM, Sebastien Vauban sva-n...@mygooglest.com wrote: Jacob Gerlach wrote: On Wed Nov 05 2014 at 4:22:06 AM Julien Cubizolles wrote: Bracket links (like link) create a \texttt{} \hypertarget{} pair instead of a \label{} \ref{} pair in the latex file. Should I go

[O] Support for table notes?

2014-10-28 Thread Jacob Gerlach
Hi list, I'm having trouble with LaTeX export of a table that uses some footnotes. It seems that export by default uses combinations of \footnotemark inside the table and \footnotetext after the table. This gets me in to trouble when the table is pushed to the next page - the footnotes are left

Re: [O] [RFC] [PATCH] Warn about unexpanded macros on export

2014-09-23 Thread Jacob Gerlach
While I expect that there's no code overlap with macro expansion, I asked about similar stop on unresolved content behavior with respect to links here: http://article.gmane.org/gmane.emacs.orgmode/90010/ That discussion died off so I thought I'd bring up the topic again here. Would it be

[O] [BUG] Macro Argument Truncation

2014-09-21 Thread Jacob Gerlach
I am making heavy use of latex strikeout for a report I'm preparing in org mode. I defined a macro for the necessary latex snippet, but the argument gets truncated on export. MWE: * Section {{{stk(The argument for this macro is several lines long. It seems that after a certain length, the

Re: [O] [BUG] Macro Argument Truncation

2014-09-21 Thread Jacob Gerlach
Ah, of course. Right under my nose, but since I knew I only had one argument, I didn't even think about it. Thanks for the quick reply. On Sun, Sep 21, 2014 at 9:40 PM, Thomas S. Dye t...@tsdye.com wrote: Aloha Jacob, Jacob Gerlach jacobgerl...@gmail.com writes: I am making heavy use

[O] Toggling Macro Definition

2014-09-21 Thread Jacob Gerlach
After writing a detailed report in org-mode and submitting it via latex/pdf, I've found out that for the next version of the report, I am required to use track changes in MS Word. I thought my best way to approximate this is to submit two versions: one with removed text in strikeout and new text

Re: [O] Stop export on bad link?

2014-08-20 Thread Jacob Gerlach
On Sun, Jul 27, 2014 at 7:27 AM, Bastien b...@gnu.org wrote: Hi Jacob, Jacob Gerlach jacobgerl...@gmail.com writes: Is it possible to configure the exporter to stop and throw an error for a bad link? No. But what is really a bad link? Is it bad because it cannot be exported

Re: [O] MobileOrg documentation?

2014-08-07 Thread Jacob Gerlach
This keeps coming up, and while the answers are there if you search in the right place or ask the list, I wonder if there is a better way. Would it be feasible to include some sort of test function in the elpa version of org that checks for the correct installation conditions and throws an error

[O] Include lengthy LaTeX in export preamble

2014-07-27 Thread Jacob Gerlach
I have a lengthy command customization that I want to include in LaTeX export. Since it must appear in the preamble, #+BEGIN_LATEX ... #+END_LATEX didn't work. I had to prepend #+LATEX_HEADER: to each line in order to achieve my result. I found C-h v org-format-latex-header RET: The document

Re: [O] Include lengthy LaTeX in export preamble

2014-07-27 Thread Jacob Gerlach
On Sun, Jul 27, 2014 at 10:08 PM, Ken Mankoff mank...@gmail.com wrote: Hi Jacob, #+LATEX_HEADER: does work on export (when else would it work?) Agreed. If I said otherwise it was a mistake. 2) From Aaron Ecay, put your header in a #+BEGIN_SRC latex section, and then run a bit of lisp to

[O] Stop export on bad link?

2014-07-26 Thread Jacob Gerlach
Is it possible to configure the exporter to stop and throw an error for a bad link? I found this old thread http://comments.gmane.org/gmane.emacs.orgmode/55912 with a patch to make the format configurable, but I'd rather receive an explicit warning. Thanks, Jake

[O] Basic Literate Program

2014-07-10 Thread Jacob Gerlach
Hi List, I only became aware of literate programming through org and have been looking for a chance to try it out. I need to write a small command line utility that parses through a plain text log file and performs some operations, which I think is a reasonably simple use case for me to try out

Re: [O] Basic Literate Program

2014-07-10 Thread Jacob Gerlach
On Thu, Jul 10, 2014 at 6:28 PM, Thorsten Jolitz tjol...@gmail.com wrote: When I call M-: (outorg-convert-org-to-outshine) on this Org-mode buffer: Thanks for this suggestion. It seems outorg/outshine are not distributed with org and must be added separately? I have to watch the size of bites I

Re: [O] Loss of Fontification partway through file

2014-06-19 Thread Jacob Gerlach
The MWE (with native fontification - t) looks ok for me, Thanks for taking time to check this. I should note that if I find a new file (test.org) and yank the MWE, it is fontified correctly, but if I save and kill the buffer and then find the file again, that is when the problem occurs. In

[O] Loss of Fontification partway through file

2014-06-18 Thread Jacob Gerlach
Hello List, I just converted my init file to an init.org to load with babel. I prefer to view the source blocks with font lock (org-src-fontify-natively). My problem is that certain parts of the file don't show the fontification. I had a lot of trouble narrowing down my init to provide a good

Re: [O] Only on my computer, Invalid function: org-with-silent-modifications

2014-06-17 Thread Jacob Gerlach
I have no idea if it relates to what you describe with cask and dependencies, but I had the same error and found several old threads stating that it's caused by installing org when it's already initialized. I solved it by Emacs -q and reinstalling from elpa. If you search for the old threads