[O] clickable text in org-mode not working

2012-11-12 Thread John Kitchin
work? Is it related to having links that are clickable? Thanks, John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] clickable text in org-mode not working (Sebastien Vauban)

2012-11-13 Thread John Kitchin
n a link. That seems possible though. j > Message: 34 > Date: Tue, 13 Nov 2012 09:50:19 +0100 > From: "Sebastien Vauban" > To: emacs-orgmode@gnu.org > Subject: Re: [O] clickable text in org-mode not working > Message-ID: <80haot999w@somewhere.org> > Conten

Re: [O] using a table from one org-file as a variable in a code block in another org-file

2012-11-26 Thread John Kitchin
That is pretty awesome! Thanks! John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu On Mon, Nov 26, 2012 at 12:32 PM, Eric

[O] inline TODO?

2012-12-14 Thread John Kitchin
ODO I do not like this because subsequent text is in a subsection we used this method to do that. * Conclusions The end. John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213

Re: [O] inline TODO?

2012-12-14 Thread John Kitchin
That is exactly what I wanted! Thanks. John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu On Fri, Dec 14, 2012 at 10:27

[O] org-ref in action

2014-06-24 Thread John Kitchin
me know if you find any bugs! Thanks, -- --- John Kitchin

Re: [O] org-ref in action

2014-06-26 Thread John Kitchin
bbdb. They both serve similar needs, but with different data sources, and different ways to think about it. We might be able to figure out a way to specify a "backend" that would allow the independent features to work in both though. John --- Jo

Re: [O] org-ref in action

2014-06-27 Thread John Kitchin
to do, but there are a lot of good ideas in it (imho of course ;) John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu On

Re: [O] org-ref in action

2014-06-29 Thread John Kitchin
with org-ref [[cite:tony-2010][page n]] exports as \cite[page n]{tony-2010} and [[cite:tony-2010][text before link::text after link]] exports as \cite[text before link][text after link]{tony-2010} John --- John Kitchin Associate Professor Doherty Hall

Re: [O] An Org centric research lab: Goodbye MS word, excel, and powerpoint

2014-07-09 Thread John Kitchin
ould like to thank Carsten and all the other contributors for creating > such > an awesome research tool. > > Cheers, > M > -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] emails written in Org Mode

2014-07-09 Thread John Kitchin
gt; -k. > > [1] http://www.djcbsoftware.nl/code/mu/mu4e.html > > -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] An Org centric research lab: Goodbye MS word, excel, and powerpoint

2014-07-10 Thread John Kitchin
t; > I welcome any advise or tips you may have > > Best Wishes, > > M > > > On Jul 9, 2014, at 3:08 PM, John Kitchin wrote: > >> That is great! Congratulations, and thanks for sharing. I have also >> converted my group into an org-centric group. Did you

Re: [O] How to call org-display-inline-images so that after a graphviz block is evaluated the image is refreshed?

2014-07-14 Thread John Kitchin
That is a nice tip! -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

[O] proposal to make C-c C-c not remove latex overlays

2014-07-14 Thread John Kitchin
nteractive "P") (if org-latex-fragment-image-overlays (org-remove-latex-fragment-image-overlays) (org-preview-latex-fragment arg))) #+END_SRC could be added. Any thoughts? -- ------- John Kitchin Professor

Re: [O] key collision for auto completion

2014-07-14 Thread John Kitchin
Any pointer or hints are appreciated. > In particular, what command is M-tab supposed to be bound to for auto > completion for the special symbols? Thanks. > > Shiyuan > -- ------- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering C

Re: [O] emails written in Org Mode

2014-07-14 Thread John Kitchin
discussions > inside gnus, so I'd really like to try this. -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] proposal to make C-c C-c not remove latex overlays

2014-07-15 Thread John Kitchin
er than C-c C-c. > > Like this? > > (setq org-babel-no-eval-on-ctrl-c-ctrl-c +1) > > -- ------- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] proposal to make C-c C-c not remove latex overlays

2014-07-15 Thread John Kitchin
-it)) #+END_SRC maybe because that is a buffer local variable? > Hi John, > > 2014ko uztailak 14an, John Kitchin-ek idatzi zuen: >> >> I am using org-mode files with equations and code blocks in lectures, >> and it is problematic that C-c C-c removes the equation overlay

Re: [O] proposal to make C-c C-c not remove latex overlays

2014-07-16 Thread John Kitchin
e immeasurably better since I have been forced to stop > taking it seriously.” --Thompson > > > On Tue, Jul 15, 2014 at 4:00 PM, John Kitchin wrote: >> I actually love C-c C-c to run code blocks! Maybe I should just bind it >> to f5 or something, I am just so used to C-cC-c

Re: [O] proposal to make C-c C-c not remove latex overlays

2014-07-16 Thread John Kitchin
DOH! thanks, that is exactly what I forgot to do. This works fine after you activate it! Thanks. Nick Dokos writes: > John Kitchin writes: > >> Aaron Ecay writes: >> >> Thanks for the advice idea, that is a nice one. It doesn't work for me >> like this t

Re: [O] proposal to make C-c C-c not remove latex overlays

2014-07-16 Thread John Kitchin
I favor the toggling behavior. There is an org-ctrl-c-ctrl-c-hook variable that can always have functions in it that keep the current behavior, but that can be removed if they are not desired. John Nick Dokos writes: > Andreas Leha writes: > >> Hi all, >> >> John Kitc

Re: [O] What is the best in-Emacs presentation mode for org-files today?

2014-07-28 Thread John Kitchin
aking the font size and navigating through > an Emacs buffer is often good enough for presentations. -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] A gentle introduction to Emacs & Org-mode?

2014-07-28 Thread John Kitchin
ter to simply play by the rules: > that way, when something goes wrong, the odds are greater to > understand what and why. > > As for a gentle introduction with a wide scope on E&Om, I don't > think there is such a thing... sadly. > > Good luck to your friend! -- ---

Re: [O] What is the best in-Emacs presentation mode for org-files today?

2014-07-29 Thread John Kitchin
Thorsten Jolitz writes: yes, you should be able to use org-babel-tangle to extract the .el file. Sorry for leaving that detail out! > Nicolas Richard writes: > >> Thorsten Jolitz writes: >> >>> John Kitchin writes: >>> >>> Hi John, >>

Re: [O] A gentle introduction to Emacs & Org-mode?

2014-07-29 Thread John Kitchin
es > have %3D instead of an equal sign (=). > > Best, > > Jorge. > > > > -- ------- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] Writing .el files for org in org?

2014-07-29 Thread John Kitchin
ks great. They are simple files that only tangle to one .el file so far. John --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu On Sun, Jul 27, 2

Re: [O] Where is the git master branch?

2014-07-30 Thread John Kitchin
ch of org-mode, what is the git command to get the master branch >> please? I've been looking on http://orgmode.org/ but can't see any >> reference for it. > > The 'master' branch is the development/unstable branch. The stable > branch is called 'maint&#

Re: [O] [RFC] Rewrite `org-entry-properties' using parser

2014-08-03 Thread John Kitchin
alued. I don’t know if this is feasible given the > current codebase; when I looked into it, it seemed pretty difficult. > > best, Erik -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] org-ref in action

2014-08-05 Thread John Kitchin
As expected. > > I hope this helps, > Eric > > > > -- > Eric Schulte > https://cs.unm.edu/~eschulte > PGP: 0x614CA05D (see https://u.fsf.org/yw) > > > > > -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] org-ref in action

2014-08-06 Thread John Kitchin
me. John --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu On Wed, Aug 6, 2014 at 6:54 AM, Xebar Saram wrote: > Thanks John > > No worries :) ive i

Re: [O] Large numbers of named variables in Babel

2014-08-06 Thread John Kitchin
make explicit cell references, but it'd be neat to just > use keys for values. > > Cheers, > > BrettW > -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

[O] org-8 manual on Amazon!

2014-08-07 Thread John Kitchin
I saw on twitter today the org mode 8 manual is available on Amazon today: http://www.amazon.com/dp/9881327709/. It looks like it covers Org 8.2. -- --- John Kitchin http://kitchingroup.cheme.cmu.edu

Re: [O] Manipulating Dates Automatically in a Headline

2014-08-13 Thread John Kitchin
- Article 1 >> - Article 2 >> *** Plenary: Global Citizenship (<2013-09-13>) >> >> >> I would like to replace the timestamps with code that dynamically >> generates timestamps based on the value either in the last sibling >> hea

Re: [O] How to represent this in Org-mode

2014-08-13 Thread John Kitchin
dying/ that stuff, > which finally might be turned into links to the prerequisites in each > module or something like that. > > Thanks anyway, -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

[O] exporting org to org with link transforms?

2014-08-13 Thread John Kitchin
. Should the org and ascii export work like I expect? Thanks, -- --- John Kitchin http://kitchingroup.cheme.cmu.edu

[O] org-babel with Matlab on windows?

2014-08-13 Thread John Kitchin
Is anyone using Matlab with org-babel on Windows successfully? If so, how did you do it? -- --- John Kitchin http://kitchingroup.cheme.cmu.edu

Re: [O] Manipulating Dates Automatically in a Headline

2014-08-14 Thread John Kitchin
;> >> I would like to replace the timestamps with code that dynamically >> generates timestamps based on the value either in the last sibling >> headline, or the parent headline. It seems to me this ought to be >> possible, but I'm not at all sure how to do it. i would really >> appreciate any guidance. thanks! >> >> Matt > > -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] How can I calculate the "age" of a headline?

2014-08-19 Thread John Kitchin
mp below this > heading and calculate the difference in days to today. > > Is that possible with org-mode already? > Could I display this information in a tabular agenda view in a column? > > Kind regards > > Martin > > > > -- --

[O] bug in org-babel emacs-lisp output?

2014-08-22 Thread John Kitchin
nil) ("a" . "b")) #+END_SRC orgtbl-format-line: Wrong type argument: listp, "b" But, this works #+BEGIN_SRC emacs-lisp :results value '((nil . "c") ("a" . "b")) #+END_SRC #+RESULTS: | (nil . c) | (a . b

[O] org-project or something like it?

2014-08-23 Thread John Kitchin
ols, e.g. projectile. It seems to have some good capabilities for project navigation, but not the org-capabilities I am thinking of. Is anyone already doing anything that sounds like this? Thanks, -- ------- John Kitchin Professor

Re: [O] org-ref "no key found"

2014-08-29 Thread John Kitchin
> > "Wrong type argument: stringp, nil". > > Any ideas how to solve this? > > Many thanks, > > Julian -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] org-ref "no key found"

2014-08-30 Thread John Kitchin
y link > and get my .bib file opened. > > Julian > > John Kitchin writes: > >> "Julian M. Burgos" writes: >> >> If you click on the bibliography link to open the file, and then go back >> to your org-file, do the cite links work? >> >&g

[O] progress indicator for code blocks?

2014-08-30 Thread John Kitchin
update it, so it doesn't quite do anything useful. What I would really like is an hourglass or some spinning thing. Does anyone know how to get that (in a cross-platform way)? -- ------- John Kitchin http://kitchingroup.cheme.cmu.edu

Re: [O] progress indicator for code blocks?

2014-08-31 Thread John Kitchin
John Kitchin writes: I am currently using this bit of advice to change the color of code blocks while they are being executed so there is a visual hint something is happening. ;; give us some hint we are running (defadvice org-babel-execute-src-block (around progress nil activate) (set-face

Re: [O] Babel more verbose?

2014-09-02 Thread John Kitchin
le it's running, which named block it's > processing. Is there anything like that available? An option perhaps? -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] progress indicator for code blocks?

2014-09-02 Thread John Kitchin
while > the evaluation is still running - would your snippet still work? > > Rainer > > > John Kitchin writes: > >> John Kitchin writes: >> >> I am currently using this bit of advice to change the color of code >> blocks while they are being exe

Re: [O] Babel more verbose?

2014-09-02 Thread John Kitchin
rg-element-property :begin (org-element-at-point)) (org-element-property :end (org-element-at-point) (overlay-put ol 'face '(foreground-color . "blue")) ad-do-it (delete-overlay ol))) #+END_SRC > John Kitchin writes: > >&

[O] help debugging latex-overlays boxes

2014-09-05 Thread John Kitchin
to figure out what the issue is. These are Windows laptops that were preconfigured by the department. Almost all of them work fine, except for this small number I cannot figure out. Any ideas? Thanks, -- --- John Kitchin http://kitchingroup.cheme.cmu.edu

Re: [O] help debugging latex-overlays boxes

2014-09-05 Thread John Kitchin
Nick Dokos writes: Thanks for the tips. It is possible minted is the culprit. I will give that a try, and the other ideas too. I am sure it is using dvipng, and that it works. It will be a nice adventure in more sophisticated debugging ;) > John Kitchin writes: > >> Hi All, >

Re: [O] help debugging latex-overlays boxes

2014-09-09 Thread John Kitchin
n it gets chomped to what looks like an old DOS format. Anyway, latex cannot handle that path, so no dvi is produced, and no image. otherwise the latex file is produced, and it compiles fine with the full path. Any ideas on how to fix that? Thanks, > John Kitchin writes: > >> Hi All

Re: [O] help debugging latex-overlays boxes

2014-09-09 Thread John Kitchin
"~/../Local/Temp")) which gives it a full path. It is pretty odd. There are about 50 students with nominally the same computers in this class, but this issue seems to only affect about 20% of them! John Kitchin writes: > Nick Dokos writes: > > I have traced my problem. The issue is in

Re: [O] Managing articles in orgmode and collaboration

2014-09-09 Thread John Kitchin
fetches bibtex entries for > books from the web, given some info (title, year, author or so)? -- ------- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] help debugging latex-overlays boxes

2014-09-09 Thread John Kitchin
Nick Dokos writes: > John Kitchin writes: > >> Nick Dokos writes: >> >> I have traced my problem. The issue is in the function >> org-preview-latex-fragment. At the end of the function, where it calls >> org-format-latex, the default-directory variable that

Re: [O] org-ref "no key found"

2014-09-13 Thread John Kitchin
N.T. and Hilborn, R.}, > Journaltitle = {Ecological Applications}, > Year = {2006}, > Number = {1}, > Pages= {5--19}, > Volume = {16}, > > Crossref = {Quick201

Re: [O] emailing agenda view

2014-09-14 Thread John Kitchin
genda, and then fill in email addresses and subject, and send. > Is there anyway to email the agenda view to a list f recipients? > > Thank you, > Ken > > -- > You will be divorced within a year. > > -- ------- John Kitchin Professor Dohe

Re: [O] org-ref "no key found"

2014-09-15 Thread John Kitchin
. Also, > if I "fix" the faces (editing the text or pressing enter so I get the > right faces) and close the notes files, I get the same wriong faces when I > reopen the file. > > Does this makes sense? Do you know what could be the issue? > Many thanks again, > >

[O] error exporting with reference to table in another file

2014-09-20 Thread John Kitchin
causing this? Thanks, -- ------- John Kitchin http://kitchingroup.cheme.cmu.edu

[O] filter for src-block export question

2014-09-20 Thread John Kitchin
e is not syntax highlighted in html at all. Any suggestions on how to achieve this? I also want to insert tablenames, and if the src-block is named to put the name above the block (for extra gravy, a hyperlink from :var to the source ;). thanks, -- --- John Kitchin http://kitchingroup.cheme.cmu.edu

Re: [O] filter for src-block export question

2014-09-21 Thread John Kitchin
w the print-table block does have parameters. I do not know where the parameters get lost, so I am reporting the issue here. John Kitchin writes: > I have noticed that when code blocks have input variables, e.g. > > #+tblname: tbl-data > | x | y | > > |---+---| > | 1 | 1 |

[O] update on missing :parameters in code blocks

2014-09-21 Thread John Kitchin
) #+END_SRC #+end_example The parameters seem to be gone in the python block. -- --- John Kitchin http://kitchingroup.cheme.cmu.edu

Re: [O] update on missing :parameters in code blocks

2014-09-22 Thread John Kitchin
g this sort of > destructive modification during export. Along the way simplification of > the code might also be possible. > > Let me know if you’re interested; I may be able to dig the old > half-patch out of a disused git branch somewhere. It may have bitrotted > some, but it

Re: [O] update on missing :parameters in code blocks

2014-09-22 Thread John Kitchin
the function! my solution is here: http://kitchingroup.cheme.cmu.edu/blog/2014/09/22/Showing-what-data-went-into-a-code-block-on-export/ I agree it would be nice if that was unnecessary, but it is not too terrible for now. > John Kitchin andrew.cmu.edu> writes: > >> >> I

Re: [O] update on missing :parameters in code blocks

2014-09-22 Thread John Kitchin
Nicolas Goaziou writes: Thanks for the clarification. Is there any chance you know why this transformation is done? Does it avoid some problem? > Hello, > > John Kitchin writes: > >> Thanks for the tips. I did not see a way to do the advice here. For what >> I need, we

Re: [O] error exporting with reference to table in another file

2014-09-24 Thread John Kitchin
by the second file. So, of course, it was missing ;) Sorry for the noise. Aaron Ecay writes: > Hi John, > > 2014ko irailak 20an, John Kitchin-ek idatzi zuen: >> >> Hi all, >> >> I have this ina n org-file: >> >> >> #+NAME: anatase-tio2-e

[O] line numbers in a code block?

2014-09-27 Thread John Kitchin
line. I would like to see code block numbers on the right hand side of the buffer, and only inside the code block. Any ideas? Thanks, -- --- John Kitchin http://kitchingroup.cheme.cmu.edu

Re: [O] line numbers in a code block?

2014-09-27 Thread John Kitchin
Charles Berry writes: > John Kitchin andrew.cmu.edu> writes: > >> >> Does anyone know a way to get dedicate line numbers in an org code >> block? >> >> I know how to get buffer code lines, but when we run a code block and >> there is an error, t

Re: [O] line numbers in a code block?

2014-09-27 Thread John Kitchin
y org-buffer, with links back to the positions in the code block where the errors are! The code is laid out here: http://kitchingroup.cheme.cmu.edu/blog/2014/09/27/Improved-debugging-of-Python-code-blocks-in-org-mode/ I am going to try it out with my students next week! j John Kitchin writes: &

[O] odd/unexpected behavior with Python src blocks

2014-09-28 Thread John Kitchin
y print(odeint(f, 1, [0, 1])) #+END_SRC #+RESULTS: : [[ 1.] : [ 0.36787947]] I am not sure why this happens, but it seems like incorrect behavior to me. -- ------- John Kitchin http://kitchingroup.cheme.cmu.edu

Re: [O] odd/unexpected behavior with Python src blocks

2014-09-29 Thread John Kitchin
; python function doing that. > > Thanks, I will try to bring it up on the scipy list. > > Aaron Ecay writes: > >> Hi John, >> >> 2014ko irailak 28an, John Kitchin-ek idatzi zuen: >> >> [...] >> >>> I am not sure why this happens, but it

[O] behavior of org-image-actual-size with units in attr_* :width

2014-09-30 Thread John Kitchin
th to catch these cases and fall back on the variable value when they exist. Any thoughts? -- --- John Kitchin http://kitchingroup.cheme.cmu.edu

Re: [O] behavior of org-image-actual-size with units in attr_* :width

2014-10-01 Thread John Kitchin
: :width 4in :placement [H] #+attr_org: :width 400 [[./images/batch-multiple.png]] For inline images, the attr_org is found first, but in latex export it is ignored and it gets the width there. Maybe no change is needed at all. > Hello, > > John Kitchin writes: > >> I have set th

Re: [O] Help on org-export-filter-link-functions

2014-10-04 Thread John Kitchin
ement-property :path link) "~/.bib.bib")) >(format "\\cite{%s}" (org-element-property :search-option link))) > (t data > #+END_SRC > > And I was wondering whether there is an easier way to retrieve the org > properties stored in the text properti

Re: [O] Help on org-export-filter-link-functions

2014-10-05 Thread John Kitchin
rties, and a different format than the default export. > John Kitchin writes: > >> I too am wondering if there is a defined way to get to the element >> properties within a filter function. > > qNo. But sometimes you can recover it from the text-properties, if it > i

Re: [O] auto hiding src blocks upon toggling headers

2014-10-08 Thread John Kitchin
> >> Hi all >> >> Is there a way to automatically hide a source block when toggling the >> fold status of the parent header. >> >> Currently the hide status is remembered when folding its parent >> headers but this turned out not to be to practical

Re: [O] Can org show live charts?

2014-10-21 Thread John Kitchin
t talking about exporting, but having the live rendered > chart image right in the buffer, > > Can org do this? I don't see any technical obstacles, but > I haven't seen this explicitly mentioned in the docs, that's > why I'm asking. > > > -- -

Re: [O] How to get to the link destination?

2014-10-21 Thread John Kitchin
sion > (org-open-at-point) > (get-text-property (point) :some-property)) > > Is there a better/faster way, especially knowing that the link is an > internal one? > > Best, -- --- John Kitchin Professor Doherty Hall A207F Department of Chemi

Re: [O] How to check whether the headline the point is on has some tag?

2014-10-24 Thread John Kitchin
t splitting an org file at tagged entries in my > org-one-to-many library (as requested on the list by Daniel Clemente). > How do I check whether a specific headline (say, one a point is at) has > some tag (but not inherited)? > > TIA, -- ------- John K

Re: [O] Previewing chemfig

2014-11-02 Thread John Kitchin
t;>> Have you tried >>> >>> #+LATEX_HEADER: \usepackage{chemfig} >> >> Yes. I think it doesn’t influence the preview system. > > It should. Perhaps your Org is outdated. > > > Regards, -- --- John Kitchin Professor

Re: [O] Previewing chemfig

2014-11-03 Thread John Kitchin
g"Garreau, Alexandre" writes: I cannot reproduce this, my math previews work fine. just the chemfig is messed up. > On 2014-11-02 at 22:48, John Kitchin wrote: >> Nicolas Goaziou writes: >> >> Interestingly, this: >> >> #+LATEX_HEADER: \usepackage{ch

Re: [O] unlinking links

2014-11-06 Thread John Kitchin
ature request ;-) > > Regards, > Adam > -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] Extending the Org syntax by a custom exporter - how to do it?

2014-11-25 Thread John Kitchin
t I won't understand what's going on). > > Also, if (when?) I "get it", I'm going to describe the process of adding > a pseudo-object somewhere (I consider my blog, or maybe I could upload > it to Worg?), so that other people can learn it easier. But for now,

Re: [O] Extending the Org syntax by a custom exporter - how to do it?

2014-11-26 Thread John Kitchin
:translate-alist '((export-block . my-org-html-export-block)) ;; quiz blocks will not be parsed, they are handled directly in org-html-export-block. :export-block "quiz" ) (browse-url (org-export-to-file 'my-html "custom-element.html")) #+END_SRC #+RESULTS: : #

Re: [O] How to view everything DONE today?

2014-11-26 Thread John Kitchin
all items done today. I tried to open the > agenda view but is does not show anything. What is the right command > to see the items done today? > > Regards, > Sascha > -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] How to view everything DONE today?

2014-11-27 Thread John Kitchin
-tags-view nil > (format "CLOSED>=\"[%s-%s-%s]\"+CLOSED<=\"[%s-%s-%s]\"" > (calendar-extract-year t0) > (calendar-extract-month t0) > (calendar-extract-day t0) > (calendar-extract-year t1) > (calendar-extract-month t1) > (calendar-extract-day

[O] possible bug in adding properties to headlines with no properties

2014-11-28 Thread John Kitchin
OPERTIES: :ID: %s :END: %s" "A headline" "some id" "some body text") #+END_SRC #+RESULTS: : ** A headline : :PROPERTIES: : :ID: some id : :END: : some body text -- --- John Kitchin http://kitchingroup.cheme.cmu.edu

Re: [O] possible bug in adding properties to headlines with no properties

2014-11-28 Thread John Kitchin
"Charles C. Berry" writes: thanks for the note. I am still on 8.2.7, so it sounds like the issue is fixed upstream of me. I look forward to getting there! > On Fri, 28 Nov 2014, John Kitchin wrote: > >> I noticed an undesirable behavior in setting a property on a headline

Re: [O] Display image in current section

2014-12-01 Thread John Kitchin
gt; sections. > > Sometimes i just would like to display the image in current section, > not all the image, because it takes some time to show them all. > Any solution? > > Thanks in advance. > > llcc > -- ------- John Kitchin Professor Doherty Hall A

Re: [O] Word under cursor to internal link

2014-12-18 Thread John Kitchin
braces all the > time! > > C-c C-l does not prompt me to create an internal link. > > Best regards, > Chai > -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

[O] new org-ref repo

2014-12-18 Thread John Kitchin
it! Thanks, -- --- John Kitchin @johnkitchin http://kitchingroup.cheme.cmu.edu

[O] org-mode in teaching

2014-12-18 Thread John Kitchin
work in org-mode, and we did all our grading in org-mode. It was pretty awesome! Thanks everyone for an awesome community, and fantastic package in org-mode. Best wishes in the new year! -- --- John Kitchin @johnkitchin http://kitchingroup.cheme.cmu.edu

Re: [O] org-mode in teaching

2014-12-19 Thread John Kitchin
keting > (201) 489-8600 ext 224 or ext 4335 > > "This is a slow pup," he said continuing his ascent. > > > > -Original Message- > > On > > Behalf Of John Kitchin > > Subject: [O] org-mode in teaching > > > > Hi all, > > >

Re: [O] org-mode in teaching

2014-12-19 Thread John Kitchin
I put a screencast at https://www.youtube.com/watch?v=cRUCiF2MwP4&feature=youtu.be&a if you would like to see some of what this was like. John Kitchin writes: > Hi all, > > I wrote a blog post > (http://kitchingroup.cheme.cmu.edu/blog/2014/12/18/org-mode-+-Python

Re: [O] org-mode in teaching

2014-12-20 Thread John Kitchin
t; spring semester. > Is your code available? > Cheers, > M > Sent from my iPad > -- ------- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] Redirecting stderr to stdout with babel/shell

2015-01-04 Thread John Kitchin
your code > } 2>&1 > : > > the : eliminates fancy error handling. i find that much less confusing. > > > samuel -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] How to get your list of categories?

2015-01-04 Thread John Kitchin
I get > > - the list of all my TODO keywords (using C-c a T), or > - the list of all my TAGS (using C-c a M)? > > -- > Rene > > > -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon Unive

Re: [O] Efficiency of Org v. LaTeX v. Word

2015-01-04 Thread John Kitchin
DT and/or Org -> LaTeX and see if it helps or hurts. I assume > Org would trump LaTeX, but would Org -> ODT or Org -> X -> DOCX (via > pandoc) beat straight Word? > > -k. > > > -- --- John Kitchin Professor Doherty Hall A207F Departm

Re: [O] Org-mode to feed a database

2015-01-04 Thread John Kitchin
learning curve. Is it worth > it? Or should one just build a web-based graphic application for such > people to use? > > Vikas > -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] Redirecting stderr to stdout with babel/shell

2015-01-11 Thread John Kitchin
Karl Voit writes: Weird. It works for me on MacOSX with bash. Out of curiosity, did you try the source: http://kitchingroup.cheme.cmu.edu/org/2015/01/04/Redirecting-stderr-in-org-mode-shell-blocks.org? I updated the web page with Achim's simpler solution. > * John Kitchin wrote:

Re: [O] Org-mode execute functions upon opening and closing

2015-01-11 Thread John Kitchin
ght be interested in taking a look at Memacs (URL below) and > http://karl-voit.at/2014/12/03/emacs-chat + other blog posts there. -- --- John Kitchin Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu

Re: [O] Org-mode execute functions upon opening and closing

2015-01-11 Thread John Kitchin
John Kitchin writes: I guess this technically only runs when you open it. To run something on closing, you might add something to kill-buffer-hook. That function would need to check if it should run, e.g. if you are closing an org-buffer that meets some criteria. You could also look at find

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