Looking at the TRAMP debug buffer, this is where things hang...
11:53:28.096969 tramp-send-string (10) # cd
/hpc/users/XXX/projects/ad.myeloid/2018-08-22.hgnc_reannot/ && exec env
PS1\=/ssh\:XXX\@bode.hpc.mssm.edu\:/hpc/users/XXX/projects/ad.myeloid/2018-08-22.hgnc_reannot/\
\#\$\ TERMCAP\= COLUMNS\=117 INSIDE_EMACS\=26.1\,comint STATATERM\=emacs
PAGER\=cat /usr/local/bin/R --no-readline
It calls "/usr/local/bin/R" whereas my R resides in
/hpc/packages/minerva-common/R/3.5.1/lib64/R/bin/R
Ideally it should just call "R" so that it goes through PATH or aliases
properly.
Thanks for your help,
Dado
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