Update of /cvsroot/fink/dists/10.4/stable/main/finkinfo/sci
In directory sfp-cvs-1.v30.ch3.sourceforge.com:/tmp/cvs-serv4349
Modified Files:
gromacs.info gromacs-mpi.info
Added Files:
gromacs.patch
Log Message:
update of gromacs package
Index: gromacs.info
===================================================================
RCS file: /cvsroot/fink/dists/10.4/stable/main/finkinfo/sci/gromacs.info,v
retrieving revision 1.5
retrieving revision 1.6
diff -u -d -r1.5 -r1.6
--- gromacs.info 18 Jun 2012 06:41:03 -0000 1.5
+++ gromacs.info 13 Feb 2013 19:30:04 -0000 1.6
@@ -1,128 +1,70 @@
Package: gromacs
-Version: 4.5.4
+Version: 4.6
Revision: 1
-Depends: %N-shlibs (= %v-%r), fftw3-shlibs, gcc46-shlibs, gsl-shlibs,
openmotif4-shlibs, x11
-BuildDepends: fftw3, gcc46-compiler, gsl, openmotif4, x11-dev
-BuildConflicts: gromacs-dev (<< %v-%r), gromacs-mpi-dev, gromacs-mpi,
gromacs-mpi-openmpi-dev, gromacs-mpi-openmpi, gromacs-mpi-lammpi-dev,
gromacs-mpi-lammpi-dev
-Conflicts: gromacs-mpi-dev, gromacs-mpi, gromacs-mpi-openmpi-dev,
gromacs-mpi-openmpi, gromacs-mpi-lammpi-dev, gromacs-mpi-lammpi-dev
-Replaces: gromacs-mpi-dev, gromacs-mpi, gromacs-mpi-openmpi-dev,
gromacs-mpi-openmpi, gromacs-mpi-lammpi-dev, gromacs-mpi-lammpi-dev
-BuildDependsOnly: false
+Depends: %N-shlibs (= %v-%r), fftw3-shlibs, gcc47-shlibs, gsl-shlibs,
openmotif4-shlibs, x11
+BuildDepends: fftw3, gcc47-compiler, gsl, openmotif4, x11-dev, cmake
+BuildConflicts: gromacs-dev, gromacs-mpi-dev, gromacs-mpi-openmpi-dev,
gromacs-mpi-lammpi-dev
+Conflicts: gromacs-mpi-openmpi, gromacs-mpi-lammpi, gromacs-bin (<< 4.6-1),
gromacs-mpi-openmpi-bin (<< 4.6-1), gromacs-mpi-lammpi-bin (<< 4.6-1),
gromacs-dev (<< 4.6-1), gromacs-mpi-dev (<< 4.6-1)
+Replaces: gromacs-mpi-openmpi, gromacs-mpi-lammpi, gromacs-bin (<< 4.6-1),
gromacs-mpi-openmpi-bin (<< 4.6-1), gromacs-mpi-lammpi-bin (<< 4.6-1),
gromacs-dev (<< 4.6-1), gromacs-mpi-dev (<< 4.6-1)
+BuildDependsOnly: False
UseMaxBuildJobs: True
-SetCC: gcc-fsf-4.6
-SetCXX: g++-fsf-4.6
+Distribution: 10.4, 10.5, 10.6
+SetCC: gcc-fsf-4.7
+SetCXX: g++-fsf-4.7
Source: mirror:custom:%n-%v.tar.gz
+PatchFile: %n.patch
CustomMirror: <<
Primary: ftp://ftp.gromacs.org/pub/gromacs/
<<
-Source-MD5: 5013de941017e014b92d41f82c7e86d6
-ConfigureParams: --enable-shared --prefix=%p --exec-prefix=%p
--mandir=%p/share --with-x --with-gsl --x-includes=/usr/X11/include
--x-libraries=/usr/X11/lib
+Source-MD5: d920a57884961a9fcbdcd9953ade469b
+PatchFile-MD5: 38fa52bb30693b1a9fd970b21e3e7531
DocFiles: AUTHORS COPYING README
PatchScript: <<
#!/bin/zsh -efv
+%{default_script}
perl -pi.bak -e 's|512|4096|g' src/gmxlib/futil.c
perl -pi.bak -e 's|/bin/csh|/bin/csh -f|g' share/**/* 2>/dev/null
perl -pi.bak -e 's|/lib/cpp|/usr/bin/cpp|g' share/**/* 2>/dev/null
<<
CompileScript: <<
#!/bin/bash -efv
-
-flag64=""
-if [[ %m == "x86_64" ]]; then
- flag64="--enable-apple-64bit"
-fi
-
-if [[ $(uname -p) == "powerpc" ]]; then
-./configure %c --enable-ppc-altivec
-else
-./configure %c --build=%m-apple-darwin`uname -r|cut -f1 -d.`
--host=%m-apple-darwin`uname -r|cut -f1 -d.` $flag64
-fi
+mkdir build
+cd build
+cmake -DGMX_GSL="ON" -DCMAKE_INSTALL_NAME_DIR=%p/lib -DCMAKE_INSTALL_PREFIX=%p
..
make
<<
InstallScript: <<
#!/bin/bash -efv
-
-flag64=""
-if [[ %m == "x86_64" ]]; then
- flag64="--enable-apple-64bit"
-fi
-
mkdir -p %i/include/%n
-make -j 1 install DESTDIR=%d
+cd build
+make install DESTDIR=%d
make clean
-if [[ $(uname -p) == "powerpc" ]]; then
-./configure %c --enable-ppc-altivec --disable-float --program-suffix="_d"
-else
-./configure %c --build=%m-apple-darwin`uname -r|cut -f1 -d.`
--host=%m-apple-darwin`uname -r|cut -f1 -d.` --disable-float
--program-suffix="_d" $flag64
-fi
-make
-make -j 1 install DESTDIR=%d
+cmake -DGMX_DOUBLE="ON" -DGMX_GSL="ON" -DCMAKE_INSTALL_NAME_DIR=%p/lib
-DCMAKE_INSTALL_PREFIX=%p ..
+make install DESTDIR=%d
<<
SplitOff: <<
Package: %N-shlibs
-Depends: fftw3-shlibs, gcc46-shlibs, gsl-shlibs, openmotif4-shlibs, x11
+Depends: fftw3-shlibs, gcc47-shlibs, gsl-shlibs, openmotif4-shlibs, x11
Files: <<
- lib/libgmx.6.dylib
- lib/libgmxana.6.0.0.dylib
- lib/libgmxana.6.dylib
- lib/libmd.6.0.0.dylib
- lib/libmd.6.dylib
- lib/libgmx_d.6.0.0.dylib
- lib/libgmx_d.6.dylib
- lib/libgmxana_d.6.0.0.dylib
- lib/libgmxana_d.6.dylib
- lib/libmd_d.6.0.0.dylib
- lib/libmd_d.6.dylib
- lib/libgmxpreprocess.6.dylib
- lib/libgmxpreprocess.6.0.0.dylib
- lib/libgmxpreprocess_d.6.dylib
- lib/libgmxpreprocess_d.6.0.0.dylib
+ lib/libgmx.6*.dylib
+ lib/libgmxana.6*.dylib
+ lib/libmd.6*.dylib
+ lib/libgmxpreprocess.6*.dylib
+ lib/libgmx_d.6*.dylib
+ lib/libgmxana_d.6*.dylib
+ lib/libmd_d.6*.dylib
+ lib/libgmxpreprocess_d.6*.dylib
<<
Shlibs: <<
-%p/lib/libgmx.6.dylib 7.0.0 %n (>= 4.5.3-1)
-%p/lib/libgmxana.6.dylib 7.0.0 %n (>= 4.5.3-1)
-%p/lib/libmd.6.dylib 7.0.0 %n (>= 4.5.3-1)
-%p/lib/libgmx_d.6.dylib 7.0.0 %n (>= 4.5.3-1)
-%p/lib/libgmxana_d.6.dylib 7.0.0 %n (>= 4.5.3-1)
-%p/lib/libmd_d.6.dylib 7.0.0 %n (>= 4.5.3-1)
-%p/lib/libgmxpreprocess.6.dylib 7.0.0 %n (>= 4.5.4-1)
-%p/lib/libgmxpreprocess_d.6.dylib 7.0.0 %n (>= 4.5.4-1)
-<<
-DocFiles: AUTHORS COPYING README
-<<
-SplitOff2: <<
-Package: %N-dev
-Depends: %N-shlibs (= %v-%r)
-Conflicts: gromacs-mpi-shlibs, gromacs-mpi-lammpi-shlibs,
gromacs-mpi-openmpi-shlibs
-Replaces: gromacs-mpi-shlibs, gromacs-mpi-lammpi-shlibs,
gromacs-mpi-openmpi-shlibs
-Files: <<
- lib/*.a
- lib/*.la
- include/gromacs
- lib/libgmx.dylib
- lib/libgmxana.dylib
- lib/libmd_d.dylib
- lib/libgmx_d.dylib
- lib/libgmxana_d.dylib
-<<
-BuildDependsOnly: True
-DocFiles: AUTHORS COPYING README
-<<
-SplitOff3: <<
-Package: %N-bin
-Conflicts: gromacs-mpi-lammpi-bin, gromacs-mpi-openmpi-bin, gromacs-mpi-bin
-Replaces: gromacs-mpi-lammpi-bin, gromacs-mpi-openmpi-bin, gromacs-mpi-bin
-Files: <<
- bin/GMXRC
- bin/GMXRC.bash
- bin/GMXRC.csh
- bin/GMXRC.zsh
- bin/completion.bash
- bin/completion.csh
- bin/completion.zsh
- bin/xplor2gmx.pl
- bin/demux.pl
+%p/lib/libgmx.6.dylib 6.0.0 %n (>= 4.5.3-1)
+%p/lib/libgmxana.6.dylib 6.0.0 %n (>= 4.5.3-1)
+%p/lib/libmd.6.dylib 6.0.0 %n (>= 4.5.3-1)
+%p/lib/libgmxpreprocess.6.dylib 6.0.0 %n (>= 4.5.4-1)
+%p/lib/libgmx_d.6.dylib 6.0.0 %n (>= 4.5.3-1)
+%p/lib/libgmxana_d.6.dylib 6.0.0 %n (>= 4.5.3-1)
+%p/lib/libmd_d.6.dylib 6.0.0 %n (>= 4.5.3-1)
+%p/lib/libgmxpreprocess_d.6.dylib 6.0.0 %n (>= 4.5.4-1)
<<
-BuildDependsOnly: True
DocFiles: AUTHORS COPYING README
<<
Description: Molecular dynamics package
@@ -138,6 +80,10 @@
/sw/share/gromacs Copy the tutor directory to your home
directory to use the tutorial.
<<
+DescPackaging: <<
+Shared libraries created by cmake set the compatibility version explicitly to
+major.minor.patch which is equally correct as libtool's use of major+1.
+<<
Homepage: http://www.gromacs.org
License: GPL
-Maintainer: W. G. Scott <wgsc...@users.sourceforge.net>
+Maintainer: Jack Howarth <howa...@bromo.med.uc.edu>
Index: gromacs-mpi.info
===================================================================
RCS file: /cvsroot/fink/dists/10.4/stable/main/finkinfo/sci/gromacs-mpi.info,v
retrieving revision 1.4
retrieving revision 1.5
diff -u -d -r1.4 -r1.5
--- gromacs-mpi.info 5 Oct 2009 02:41:01 -0000 1.4
+++ gromacs-mpi.info 13 Feb 2013 19:30:05 -0000 1.5
@@ -1,129 +1,78 @@
Info2: <<
Package: gromacs-mpi-%type_pkg[handler]
-Version: 4.0.5
-Revision: 1004
+Version: 4.6
+Revision: 1
Type: handler (lammpi openmpi)
-Depends: %N-shlibs (= %v-%r), gsl-shlibs,fftw3-shlibs, x11, openmotif4-shlibs,
(%type_pkg[handler] = lammpi) lammpi (>= 7.1.2-1000), (%type_pkg[handler] =
openmpi) openmpi
-BuildDepends: gsl, fftw3, x11-dev, (%type_pkg[handler] = lammpi) lammpi-dev
(>= 7.1.2-1000), (%type_pkg[handler] = openmpi) openmpi-dev
-BuildConflicts: gromacs-mpi-dev, (%type_pkg[handler] = lammpi) openmpi-dev,
(%type_pkg[handler] = openmpi) lammpi-dev, gromacs-dev
-Conflicts: gromacs-mpi, gromacs-mpi-lammpi, gromacs-mpi-openmpi, gromacs,
gromacs-dev
-Replaces: gromacs-mpi, gromacs-mpi-lammpi, gromacs-mpi-openmpi, gromacs,
gromacs-dev
+Depends: %N-shlibs (= %v-%r), gsl-shlibs, fftw3-shlibs, gcc47-shlibs,
openmotif4-shlibs, (%type_pkg[handler] = lammpi) lammpi (>= 7.1.4-1002),
(%type_pkg[handler] = openmpi) openmpi (>= 1.4.5), libxml2-shlibs, x11
+BuildDepends: gsl, fftw3, gcc47-compiler, (%type_pkg[handler] = lammpi)
lammpi-dev (>= 7.1.4-1002), (%type_pkg[handler] = openmpi) openmpi-dev (>=
1.4.5), libiconv-dev, libxml2, x11-dev, cmake
+BuildConflicts: gromacs-dev, gromacs-mpi-dev, gromacs-mpi-openmpi-dev,
gromacs-mpi-lammpi-dev
BuildDependsOnly: false
+Conflicts: gromacs, (%type_pkg[handler] = openmpi) gromacs-mpi-lammpi,
(%type_pkg[handler] = lammpi) gromacs-mpi-openmpi, gromacs-bin (<< 4.6-1),
gromacs-mpi-lammpi-bin (<< 4.6-1), gromacs-mpi-openmpi-bin (<< 4.6-1),
gromacs-dev (<< 4.6-1), gromacs-mpi-dev (<< 4.6-1)
+Replaces: gromacs, (%type_pkg[handler] = openmpi) gromacs-mpi-lammpi,
(%type_pkg[handler] = lammpi) gromacs-mpi-openmpi, gromacs-bin (<< 4.6-1),
gromacs-mpi-lammpi-bin (<< 4.6-1), gromacs-mpi-openmpi-bin (<< 4.6-1),
gromacs-dev (<< 4.6-1), gromacs-mpi-dev (<< 4.6-1)
+Distribution: 10.4, 10.5, 10.6
+UseMaxBuildJobs: True
+SetCC: gcc-fsf-4.7
+SetCXX: g++-fsf-4.7
+SetCPPFLAGS: -I%p/include/%type_raw[handler]
+SetLDFLAGS: -L%p/lib/%type_raw[handler]
Source: mirror:custom:gromacs-%v.tar.gz
+PatchFile: gromacs.patch
CustomMirror: <<
- Primary: ftp://ftp.gromacs.org/pub/gromacs/
+Primary: ftp://ftp.gromacs.org/pub/gromacs/
<<
-Source-MD5: 2db2261852a4d3a97547979f379dee94
-ConfigureParams: --enable-shared --prefix=%p --exec-prefix=%p
--mandir=%p/share --with-x --with-gsl --x-includes=/usr/X11/include
--x-libraries=/usr/X11/lib --enable-mpi
+Source-MD5: d920a57884961a9fcbdcd9953ade469b
+PatchFile-MD5: 38fa52bb30693b1a9fd970b21e3e7531
DocFiles: AUTHORS COPYING README
-SetCPPFLAGS: -I%p/include/%type_raw[handler]
-SetLDFLAGS: -L%p/lib/%type_raw[handler]
PatchScript: <<
#!/bin/zsh -efv
+%{default_script}
perl -pi.bak -e 's|512|4096|g' src/gmxlib/futil.c
perl -pi.bak -e 's|/bin/csh|/bin/csh -f|g' share/**/* 2>/dev/null
perl -pi.bak -e 's|/lib/cpp|/usr/bin/cpp|g' share/**/* 2>/dev/null
<<
CompileScript: <<
#!/bin/bash -efv
-
-flag64=""
-if [[ %m == "x86_64" ]]; then
- flag64="--enable-apple-64bit"
-fi
-
-if [[ $(uname -p) == "powerpc" ]]; then
- ./configure %c --enable-ppc-altivec --program-suffix=_mpi
-else
- ./configure %c --build=%m-apple-darwin`uname -r|cut -f1 -d.`
--host=%m-apple-darwin`uname -r|cut -f1 -d.` --program-suffix=_mpi $flag64
-fi
-num_cpu=$(echo `sysctl -n hw.ncpu`)
-make -j $num_cpu mdrun
+mkdir build
+cd build
+cmake -DGMX_MPI="ON" -DGMX_GSL="ON" -DCMAKE_INSTALL_NAME_DIR=%p/lib
-DCMAKE_INSTALL_PREFIX=%p ..
+make
<<
InstallScript: <<
#!/bin/bash -efv
-
-flag64=""
-if [[ %m == "x86_64" ]]; then
- flag64="--enable-apple-64bit"
-fi
-
mkdir -p %i/include/%n
+cd build
make install DESTDIR=%d
make clean
-
-if [[ $(uname -p) == "powerpc" ]]; then
- ./configure %c --enable-ppc-altivec --disable-float
--program-suffix="_mpi_d"
-else
- ./configure %c --build=%m-apple-darwin`uname -r|cut -f1 -d.`
--host=%m-apple-darwin`uname -r|cut -f1 -d.` --disable-float $flag64
--program-suffix="_mpi_d"
-fi
- num_cpu=$(echo `sysctl -n hw.ncpu`)
- make -j $num_cpu mdrun
- make install-mdrun DESTDIR=%d
+cmake -DGMX_MPI="ON" -DGMX_DOUBLE="ON" -DGMX_GSL="ON"
-DCMAKE_INSTALL_NAME_DIR=%p/lib -DCMAKE_INSTALL_PREFIX=%p ..
+make install DESTDIR=%d
<<
SplitOff: <<
Package: %N-shlibs
-Conflicts: gromacs-mpi-shlibs, gromacs-mpi-lammpi-shlibs,
gromacs-mpi-openmpi-shlibs, gromacs-shlibs
-Replaces: gromacs-mpi-shlibs, gromacs-mpi-lammpi-shlibs,
gromacs-mpi-openmpi-shlibs, gromacs-shlibs
-Depends: (%type_pkg[handler] = lammpi) lammpi (>= 7.1.2-1000),
(%type_pkg[handler] = openmpi) openmpi, fftw3-shlibs
+Depends: gsl-shlibs, fftw3-shlibs, gcc47-shlibs, openmotif4-shlibs,
(%type_pkg[handler] = lammpi) lammpi (>= 7.1.4-1002), (%type_pkg[handler] =
openmpi) openmpi (>= 1.4.5), x11
+Conflicts: gromacs-mpi-lammpi-shlibs, gromacs-mpi-openmpi-shlibs
+Replaces: gromacs-mpi-lammpi-shlibs, gromacs-mpi-openmpi-shlibs
Files: <<
- lib/libgmx_mpi.5.0.0.dylib
- lib/libgmx_mpi.5.dylib
- lib/libmd_mpi.5.0.0.dylib
- lib/libmd_mpi.5.dylib
- lib/libgmx_mpi_d.5.0.0.dylib
- lib/libgmx_mpi_d.5.dylib
- lib/libmd_mpi_d.5.0.0.dylib
- lib/libmd_mpi_d.5.dylib
+ lib/libgmx_mpi.6*.dylib
+ lib/libgmxana_mpi.6*.dylib
+ lib/libmd_mpi.6*.dylib
+ lib/libgmxpreprocess_mpi.6*.dylib
+ lib/libgmx_mpi_d.6*.dylib
+ lib/libgmxana_mpi_d.6*.dylib
+ lib/libmd_mpi_d.6*.dylib
+ lib/libgmxpreprocess_mpi_d.6*.dylib
<<
Shlibs: <<
- %p/lib/libgmx_mpi.5.dylib 6.0.0 %n (>= 4.0-1000)
- %p/lib/libmd_mpi.5.dylib 6.0.0 %n (>= 4.0-1000)
- %p/lib/libgmx_mpi_d.5.dylib 6.0.0 %n (>= 4.0.5-1001)
- %p/lib/libmd_mpi_d.5.dylib 6.0.0 %n (>= 4.0.5-1001)
+ %p/lib/libgmx_mpi.6.dylib 6.0.0 %n (>= 4..54-1)
+ %p/lib/libgmxana_mpi.6.dylib 6.0.0 %n (>= 4..54-1)
+ %p/lib/libmd_mpi.6.dylib 6.0.0 %n (>= 4.5.4-1)
+ %p/lib/libgmxpreprocess_mpi.6.dylib 6.0.0 %n (>= 4.5.4-1)
+ %p/lib/libgmx_mpi_d.6.dylib 6.0.0 %n (>= 4.5.4-1)
+ %p/lib/libgmxana_mpi_d.6.dylib 6.0.0 %n (>= 4..54-1)
+ %p/lib/libmd_mpi_d.6.dylib 6.0.0 %n (>= 4.5.4-1)
+ %p/lib/libgmxpreprocess_mpi_d.6.dylib 6.0.0 %n (>= 4.5.4-1)
<<
DocFiles: AUTHORS COPYING README
<<
-SplitOff2: <<
-Package: %N-dev
-Conflicts: gromacs-mpi-dev, gromacs-mpi-lammpi-dev, gromacs-mpi-openmpi-dev,
gromacs-dev
-Replaces: gromacs-mpi-dev, gromacs-mpi-lammpi-dev, gromacs-mpi-openmpi-dev,
gromacs-dev
-Depends: %N-shlibs, fftw3-shlibs
-Files: <<
- lib/libgmx_mpi.dylib
- lib/libmd_mpi.dylib
- lib/libgmx_mpi.a
- lib/libmd_mpi.a
- lib/libgmx_mpi.la
- lib/libmd_mpi.la
- lib/libgmx_mpi_d.dylib
- lib/libmd_mpi_d.dylib
- lib/libgmx_mpi_d.a
- lib/libmd_mpi_d.a
- lib/libgmx_mpi_d.la
- lib/libmd_mpi_d.la
-<<
-BuildDependsOnly: True
-DocFiles: AUTHORS COPYING README
-<<
-SplitOff3: <<
-Package: %N-bin
-Conflicts: gromacs-bin
-Replaces: gromacs-bin
-Files: <<
- bin/GMXRC
- bin/GMXRC.bash
- bin/GMXRC.csh
- bin/GMXRC.zsh
- bin/completion.bash
- bin/completion.csh
- bin/completion.zsh
- bin/xplor2gmx.pl
- bin/demux.pl
-<<
-BuildDependsOnly: True
-DocFiles: AUTHORS COPYING README
-<<
Description: Molecular dynamics package (Parallel version)
DescDetail: <<
GROMACS is a versatile and extremely well optimized package
@@ -139,7 +88,11 @@
Any package using gromacs-mpi-openmpi-dev or gromacs-mpi-lammpi-dev
should BuildDepends either openmpi-dev or lammpi-dev as well.
<<
+DescPackaging: <<
+Shared libraries created by cmake set the compatibility version explicitly to
+major.minor.patch which is equally correct as libtool's use of major+1.
+<<
Homepage: http://www.gromacs.org
License: GPL
-Maintainer: W. G. Scott <wgsc...@users.sourceforge.net>
+Maintainer: Jack Howarth <howa...@bromo.med.uc.edu>
<<
--- NEW FILE: gromacs.patch ---
diff -uNr gromacs-4.6/CMakeLists.txt gromacs-4.6.fink/CMakeLists.txt
--- gromacs-4.6/CMakeLists.txt 2013-01-18 15:46:08.000000000 -0500
+++ gromacs-4.6.fink/CMakeLists.txt 2013-02-12 18:23:54.000000000 -0500
@@ -64,6 +64,7 @@
set(PROJECT_VERSION ${CUSTOM_VERSION_STRING})
endif (CUSTOM_VERSION_STRING)
set(SOVERSION 6)
+set(VERSION 6.0.0)
# It is a bit irritating, but this has to be set separately for now!
SET(CPACK_PACKAGE_VERSION_MAJOR "4")
SET(CPACK_PACKAGE_VERSION_MINOR "6")
diff -uNr gromacs-4.6/src/gmxlib/CMakeLists.txt
gromacs-4.6.fink/src/gmxlib/CMakeLists.txt
--- gromacs-4.6/src/gmxlib/CMakeLists.txt 2013-01-18 15:38:57.000000000
-0500
+++ gromacs-4.6.fink/src/gmxlib/CMakeLists.txt 2013-02-12 18:25:19.000000000
-0500
@@ -117,7 +117,7 @@
if(USE_VERSION_H)
add_dependencies(gmx gmx_version)
endif()
-set_target_properties(gmx PROPERTIES OUTPUT_NAME "gmx${GMX_LIBS_SUFFIX}"
SOVERSION ${SOVERSION} INSTALL_NAME_DIR "${LIB_INSTALL_DIR}"
+set_target_properties(gmx PROPERTIES OUTPUT_NAME "gmx${GMX_LIBS_SUFFIX}"
SOVERSION ${SOVERSION} VERSION ${VERSION} INSTALL_NAME_DIR "${LIB_INSTALL_DIR}"
COMPILE_FLAGS "${OpenMP_C_FLAGS}" COMPILE_DEFINITIONS "TMPI_EXPORTS")
install(TARGETS gmx DESTINATION ${LIB_INSTALL_DIR} COMPONENT libraries)
diff -uNr gromacs-4.6/src/kernel/CMakeLists.txt
gromacs-4.6.fink/src/kernel/CMakeLists.txt
--- gromacs-4.6/src/kernel/CMakeLists.txt 2013-01-18 15:38:58.000000000
-0500
+++ gromacs-4.6.fink/src/kernel/CMakeLists.txt 2013-02-12 18:26:51.000000000
-0500
@@ -76,7 +76,7 @@
add_library(gmxpreprocess ${GMXPREPROCESS_SOURCES})
target_link_libraries(gmxpreprocess md)
-set_target_properties(gmxpreprocess PROPERTIES OUTPUT_NAME
"gmxpreprocess${GMX_LIBS_SUFFIX}" SOVERSION ${SOVERSION} INSTALL_NAME_DIR
"${LIB_INSTALL_DIR}"
+set_target_properties(gmxpreprocess PROPERTIES OUTPUT_NAME
"gmxpreprocess${GMX_LIBS_SUFFIX}" SOVERSION ${SOVERSION} VERSION ${VERSION}
INSTALL_NAME_DIR "${LIB_INSTALL_DIR}"
COMPILE_FLAGS "${OpenMP_C_FLAGS}")
diff -uNr gromacs-4.6/src/mdlib/CMakeLists.txt
gromacs-4.6.fink/src/mdlib/CMakeLists.txt
--- gromacs-4.6/src/mdlib/CMakeLists.txt 2013-01-18 15:38:58.000000000
-0500
+++ gromacs-4.6.fink/src/mdlib/CMakeLists.txt 2013-02-12 18:25:52.000000000
-0500
@@ -73,7 +73,7 @@
else()
set(MD_PREFIX)
endif()
-set_target_properties(md PROPERTIES OUTPUT_NAME
"${MD_PREFIX}md${GMX_LIBS_SUFFIX}" SOVERSION ${SOVERSION} INSTALL_NAME_DIR
"${LIB_INSTALL_DIR}"
+set_target_properties(md PROPERTIES OUTPUT_NAME
"${MD_PREFIX}md${GMX_LIBS_SUFFIX}" SOVERSION ${SOVERSION} VERSION ${VERSION}
INSTALL_NAME_DIR "${LIB_INSTALL_DIR}"
COMPILE_FLAGS "${OpenMP_C_FLAGS}")
install(TARGETS md DESTINATION ${LIB_INSTALL_DIR} COMPONENT libraries)
diff -uNr gromacs-4.6/src/tools/CMakeLists.txt
gromacs-4.6.fink/src/tools/CMakeLists.txt
--- gromacs-4.6/src/tools/CMakeLists.txt 2013-01-18 15:38:58.000000000
-0500
+++ gromacs-4.6.fink/src/tools/CMakeLists.txt 2013-02-12 18:28:59.000000000
-0500
@@ -71,7 +71,7 @@
target_link_libraries(gmxana md gmx ${GSL_LIBRARIES})
-set_target_properties(gmxana PROPERTIES OUTPUT_NAME "gmxana${GMX_LIBS_SUFFIX}"
SOVERSION ${SOVERSION} INSTALL_NAME_DIR "${LIB_INSTALL_DIR}"
+set_target_properties(gmxana PROPERTIES OUTPUT_NAME "gmxana${GMX_LIBS_SUFFIX}"
SOVERSION ${SOVERSION} VERSION ${VERSION} INSTALL_NAME_DIR "${LIB_INSTALL_DIR}"
COMPILE_FLAGS "${OpenMP_C_FLAGS}")
# List of programs with single corresponding .c source file,
------------------------------------------------------------------------------
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