Update of /cvsroot/fink/dists/10.4/unstable/main/finkinfo/10.4-EOL/sci
In directory vz-cvs-3.sog:/tmp/cvs-serv7327/sci
Modified Files:
octave.patch
Added Files:
fltk-backend-oct-3.2.4.info octave324-docs.info
octave-3.2.4.info octave-3.2.4.patch
Log Message:
sync w/ 10.!4, validated on powerpc-darwin8
--- NEW FILE: octave-3.2.4.patch ---
diff -Nurd octave-3.2.4.orig/src/Makefile.in octave-3.2.4/src/Makefile.in
--- octave-3.2.4.orig/src/Makefile.in 2009-06-03 08:32:49.000000000 -0400
+++ octave-3.2.4/src/Makefile.in 2011-08-30 18:51:07.000000000 -0400
@@ -67,7 +67,7 @@
cellfun.cc chol.cc ccolamd.cc colamd.cc colloc.cc \
conv2.cc convhulln.cc daspk.cc dasrt.cc dassl.cc det.cc \
dispatch.cc dlmread.cc dmperm.cc eig.cc eigs.cc fft.cc \
- fft2.cc fftn.cc fftw.cc filter.cc find.cc fltk_backend.cc \
+ fft2.cc fftn.cc fftw.cc filter.cc find.cc \
gammainc.cc gcd.cc getgrent.cc getpwent.cc getrusage.cc \
givens.cc hess.cc hex2num.cc inv.cc kron.cc lookup.cc \
lsode.cc lu.cc luinc.cc matrix_type.cc max.cc md5sum.cc \
@@ -327,9 +327,6 @@
$(DLD_PICOBJ): \
ALL_CXXFLAGS := $(filter-out $(DLL_CXXDEFS), $(ALL_CXXFLAGS))
-fltk_backend.o pic/fltk_backend.o: \
- ALL_CXXFLAGS := $(filter-out $(DLL_CXXDEFS), $(ALL_CXXFLAGS)
$(GRAPHICS_CFLAGS))
-
XERBLA = ../libcruft/blas-xtra/xerbla.o
ifdef FPICFLAG
PIC_XERBLA = ../libcruft/blas-xtra/pic/xerbla.o
@@ -669,7 +666,6 @@
regexp.oct: OCT_LINK_DEPS += $(REGEX_LIBS)
urlwrite.oct: OCT_LINK_DEPS += $(CURL_LIBS)
__glpk__.oct: OCT_LINK_DEPS += $(GLPK_LIBS)
-fltk_backend.oct: OCT_LINK_DEPS += $(GRAPHICS_LIBS) $(FT2_LIBS)
check: all
.PHONY: check
Index: octave.patch
===================================================================
RCS file:
/cvsroot/fink/dists/10.4/unstable/main/finkinfo/10.4-EOL/sci/octave.patch,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -d -r1.1 -r1.2
--- octave.patch 11 Jul 2011 04:05:48 -0000 1.1
+++ octave.patch 7 Sep 2011 04:10:56 -0000 1.2
@@ -1,6 +1,6 @@
-diff -Nurd -x'*~' octave-3.0.5.orig/src/DLD-FUNCTIONS/__glpk__.cc
octave-3.0.5/src/DLD-FUNCTIONS/__glpk__.cc
---- octave-3.0.5.orig/src/DLD-FUNCTIONS/__glpk__.cc 2009-01-16
01:46:23.000000000 -0500
-+++ octave-3.0.5/src/DLD-FUNCTIONS/__glpk__.cc 2010-10-15 17:50:25.000000000
-0400
+diff -Nurd -x'*~' octave-@OCTVERSION@.orig/src/DLD-FUNCTIONS/__glpk__.cc
octave-@OCTVERSION@/src/DLD-FUNCTIONS/__glpk__.cc
+--- octave-@OCTVERSION@.orig/src/DLD-FUNCTIONS/__glpk__.cc 2009-01-16
01:46:23.000000000 -0500
++++ octave-@OCTVERSION@/src/DLD-FUNCTIONS/__glpk__.cc 2010-10-15
17:50:25.000000000 -0400
@@ -59,8 +59,20 @@
#else
@@ -24,3 +24,271 @@
#endif
}
+diff -Nurd '-x*~' octave-@OCTVERSION@//octave-forge-comp
octave-@OCTVERSION@.patched//octave-forge-comp
+--- octave-@OCTVERSION@//octave-forge-comp 1969-12-31 19:00:00.000000000
-0500
++++ octave-@OCTVERSION@.patched//octave-forge-comp 2011-08-11
20:23:10.000000000 -0400
+@@ -0,0 +1,4 @@
++#!@FINKPREFIX@/bin/octave-@OCTVERSION@ -V
++pkg prefix bld/share/octave/@OCTVERSION@/packages
bld/lib/octave/@OCTVERSION@/packages
++pkg global_list bld/share/octave/@OCTVERSION@/octave_packages
++pkg install -verbose -nodeps ./@PKGNAME@/
+diff -Nurd '-x*~' octave-@OCTVERSION@//octave-forge-compile.sh
octave-@OCTVERSION@.patched//octave-forge-compile.sh
+--- octave-@OCTVERSION@//octave-forge-compile.sh 1969-12-31
19:00:00.000000000 -0500
++++ octave-@OCTVERSION@.patched//octave-forge-compile.sh 2011-08-11
20:23:10.000000000 -0400
+@@ -0,0 +1,7 @@
++#!/bin/sh -ev
++cd ..
++mkdir -p bld/share/octave/@OCTVERSION@/packages
bld/lib/octave/@OCTVERSION@/packages
++cp @FINKPREFIX@/share/octave/@OCTVERSION@/scripts/octave-forge-comp
@FINKPREFIX@/share/octave/@OCTVERSION@/scripts/octave-forge-inst bld
++chmod a+x bld/octave-forge*
++sed -i.bak -e "s/@PKGNAME@/$1/" bld/octave-forge*
++bld/octave-forge-comp
+\ No newline at end of file
+diff -Nurd '-x*~' octave-@OCTVERSION@//octave-forge-inst
octave-@OCTVERSION@.patched//octave-forge-inst
+--- octave-@OCTVERSION@//octave-forge-inst 1969-12-31 19:00:00.000000000
-0500
++++ octave-@OCTVERSION@.patched//octave-forge-inst 2011-08-11
20:23:10.000000000 -0400
+@@ -0,0 +1,7 @@
++#!@FINKPREFIX@/bin/octave-@OCTVERSION@ -q
++load share/octave/@OCTVERSION@/octave_packages;
++apfx = global_packages {1}.archprefix;
++global_packages {1}.archprefix = regexprep(apfx,'.*bld','@FINKPREFIX@');
++dr = global_packages {1}.dir;
++global_packages {1}.dir = regexprep(dr,'.*bld','@FINKPREFIX@');
++save -text share/octave/@OCTVERSION@/octave_packages global_packages
+diff -Nurd '-x*~' octave-@OCTVERSION@//octave-forge-install.sh
octave-@OCTVERSION@.patched//octave-forge-install.sh
+--- octave-@OCTVERSION@//octave-forge-install.sh 1969-12-31
19:00:00.000000000 -0500
++++ octave-@OCTVERSION@.patched//octave-forge-install.sh 2011-08-11
20:23:10.000000000 -0400
+@@ -0,0 +1,5 @@
++#!/bin/sh -ev
++cd $2
++cp -r $3/../bld/{share,lib} .
++$3/../bld/octave-forge-inst
++mv share/octave/@OCTVERSION@/octave_packages
share/octave/@OCTVERSION@/packages/$1/.
+diff -Nurd '-x*~' octave-@OCTVERSION@//octave-forge-postinst
octave-@OCTVERSION@.patched//octave-forge-postinst
+--- octave-@OCTVERSION@//octave-forge-postinst 1969-12-31 19:00:00.000000000
-0500
++++ octave-@OCTVERSION@.patched//octave-forge-postinst 2011-08-11
20:23:10.000000000 -0400
+@@ -0,0 +1,6 @@
++#!@FINKPREFIX@/bin/octave-@OCTVERSION@ -q
++load @FINKPREFIX@/share/octave/@OCTVERSION@/packages/@PKGNAME@/octave_packages
++newpackage = global_packages;
++load @FINKPREFIX@/var/octave/@OCTVERSION@/octave_packages
++global_packages = {global_packages{:},newpackage{:}};
++save -text @FINKPREFIX@/var/octave/@OCTVERSION@/octave_packages
global_packages
+diff -Nurd '-x*~' octave-@OCTVERSION@//octave-forge-prerm
octave-@OCTVERSION@.patched//octave-forge-prerm
+--- octave-@OCTVERSION@//octave-forge-prerm 1969-12-31 19:00:00.000000000
-0500
++++ octave-@OCTVERSION@.patched//octave-forge-prerm 2011-08-11
20:23:10.000000000 -0400
+@@ -0,0 +1,9 @@
++#!@FINKPREFIX@/bin/octave-@OCTVERSION@ -q
++load @FINKPREFIX@/var/octave/@OCTVERSION@/octave_packages
++for i = 1:length(global_packages)
++ if strcmp(global_packages{i}.name,'@PKGNAME@')
++ global_packages(i) = [];
++ break
++ endif
++endfor
++save -text @FINKPREFIX@/var/octave/@OCTVERSION@/octave_packages
global_packages
+diff -Naur startup/octaverc.null startup/octaverc
+--- startup/octaverc.null 2011-08-12 14:21:47.000000000 -0400
++++ startup/octaverc 2011-08-12 12:32:41.000000000 -0400
+@@ -0,0 +1,24 @@
++## System-wide startup file for Octave.
++##
++## This file should contain any commands that should be executed each
++## time Octave starts for every user at this site.
++
++## Configure readline using the file inputrc in the Octave startup
++## directory.
++
++read_readline_init_file (sprintf ("%s%s%s",
++ octave_config_info ("startupfiledir"),
++ filesep, "inputrc"));
++
++if (strcmp (PAGER (), "less") && isempty (getenv ("LESS")))
++ PAGER_FLAGS ('-e -X -P"-- less ?pB(%pB\\%):--. (f)orward, (b)ack,
(q)uit$"');
++endif
++
++## This appears here instead of in the pkg/PKG_ADD file so that --norc
++## will also skip automatic loading of packages.
++
++try
++ pkg global_list @FINKPREFIX@/var/octave/@OCTVERSION@/octave_packages
++catch
++end_try_catch
++pkg ("load", "auto");
+diff -Nurd '-x*~' octave-@OCTVERSION@/doc/interpreter/mkoctfile-@OCTVERSION@.1
octave-@OCTVERSION@.patched/doc/interpreter/mkoctfile-@OCTVERSION@.1
+--- octave-@OCTVERSION@/doc/interpreter/mkoctfile-@OCTVERSION@.1
2011-08-12 22:01:38.000000000 -0400
++++ octave-@OCTVERSION@.patched/doc/interpreter/mkoctfile-@OCTVERSION@.1
2011-08-12 22:18:42.000000000 -0400
+@@ -19,11 +19,11 @@
+ .\"
+ .\" This page was contributed by Dirk Eddelbuettel <e...@debian.org>
+ .\"
+-.TH MKOCTFILE 1 "1 November 2002" "GNU Octave"
++.TH mkoctfile-@OCTVERSION@ 1 "1 November 2002" "GNU Octave"
+ .SH NAME
+-mkoctfile \- Compile dynamic-load modules for GNU Octave
++mkoctfile-@OCTVERSION@ \- Compile dynamic-load modules for GNU Octave
+ .SH SYNOPSIS
+-.BR mkoctfile\ [\-IDIR]\ [\-DDEF]\ [\-lLIB]\ [\-LDIR]\ [\-M|\-\-depend]\
++.BR mkoctfile-@OCTVERSION@\ [\-IDIR]\ [\-DDEF]\ [\-lLIB]\ [\-LDIR]\
[\-M|\-\-depend]\
+ [\-c]\ [\-o FILE|\-\-output FILE]\ [\-p VAR|\-\-print VAR]\ [\-s|\-\-strip]\
+ [\-v|\-\-verbose]\ [\-h|\-?|\-\-help]\ \fIfile\fP .\|.\|.
+ .SH DESCRIPTION
+diff -Nurd '-x*~' octave-@OCTVERSION@/doc/interpreter/octave-@OCTVERSION@.1
octave-@OCTVERSION@.patched/doc/interpreter/octave-@OCTVERSION@.1
+--- octave-@OCTVERSION@/doc/interpreter/octave-@OCTVERSION@.1 2011-08-12
22:00:40.000000000 -0400
++++ octave-@OCTVERSION@.patched/doc/interpreter/octave-@OCTVERSION@.1
2011-08-12 22:18:40.000000000 -0400
+@@ -16,19 +16,19 @@
+ .\" along with Octave; see the file COPYING. If not, see
+ .\" <http://www.gnu.org/licenses/>.
+ .\"
+-.TH Octave 1 "Jan 8 1996"
++.TH Octave-@OCTVERSION@ 1 "Jan 8 1996"
+ .SH NAME
+-octave \- A high-level interactive language for numerical computations.
++octave-@OCTVERSION@ \- A high-level interactive language for numerical
computations.
+ .SH SYNOPSIS
+ .nf
+-octave [options]
++octave-@OCTVERSION@ [options]
+ .fi
+ .SH OPTIONS
+-The complete set of command-line options for octave is available by
++The complete set of command-line options for octave-@OCTVERSION@ is available
by
+ running the command
+ .nf
+
+- octave \-\-help
++ octave-@OCTVERSION@ \-\-help
+
+ .fi
+ .SH DESCRIPTION
+diff -Nurd '-x*~'
octave-@OCTVERSION@/doc/interpreter/octave-bug-@OCTVERSION@.1
octave-@OCTVERSION@.patched/doc/interpreter/octave-bug-@OCTVERSION@.1
+--- octave-@OCTVERSION@/doc/interpreter/octave-bug-@OCTVERSION@.1
2011-08-12 22:01:04.000000000 -0400
++++ octave-@OCTVERSION@.patched/doc/interpreter/octave-bug-@OCTVERSION@.1
2011-08-12 22:13:25.000000000 -0400
+@@ -18,18 +18,18 @@
+ .\"
+ .\" This page was contributed by Dirk Eddelbuettel <e...@debian.org>
+ .\"
+-.TH octave-bug 1 "6 March 2000" GNU
++.TH octave-bug-@OCTVERSION@ 1 "6 March 2000" GNU
+ .SH NAME
+-octave-bug \- report a bug in GNU Octave
++octave-bug-@OCTVERSION@ \- report a bug in GNU Octave
+ .SH SYNOPSIS
+-.B octave-bug
++.B octave-bug-@OCTVERSION@
+ .RB [\| \-s
+ .IR subject \|]
+ .SH DESCRIPTION
+-.B octave-bug
++.B octave-bug-@OCTVERSION@
+ is a shell script to help the user compose and mail bug reports
+ concerning Octave in a standard format.
+-.B octave-bug
++.B octave-bug-@OCTVERSION@
+ is typically invoked by the Octave command
+ .B bug_report
+ which is intended to be called interactively from within Octave. This
+@@ -37,7 +37,7 @@
+ template bug report file and starts an editor on that file. The bug report
+ will be sent to the bug-octave mailing list once the editing has been
+ completed (this assumes of course that your system can use email). However,
+-the user could also call \fBoctave-bug\fR outside of Octave.
++the user could also call \fBoctave-bug-@OCTVERSION@\fR outside of Octave.
+ .PP
+ Please read the `Bugs' chapter in the Octave manual to find out how to submit
+ a bug report that will enable the Octave maintainers to fix the problem. If
+@@ -50,7 +50,7 @@
+ be quoted.
+ .SH ENVIRONMENT VARIABLES
+ .B
+-octave-bug
++octave-bug-@OCTVERSION@
+ uses the environment variables
+ .BR USER,
+ .BR EDITOR,
+@@ -60,7 +60,7 @@
+ .SH VERSION
+ This document was last revised for Octave version 2.0.16.
+ .SH SEE ALSO
+-.BR octave (1),
++.BR octave-@OCTVERSION@ (1),
+ .BR bashbug (1)
+ .SH AUTHOR
+ .nf
+diff -Nurd '-x*~'
octave-@OCTVERSION@/doc/interpreter/octave-config-@OCTVERSION@.1
octave-@OCTVERSION@.patched/doc/interpreter/octave-config-@OCTVERSION@.1
+--- octave-@OCTVERSION@/doc/interpreter/octave-config-@OCTVERSION@.1
2011-08-12 22:01:22.000000000 -0400
++++ octave-@OCTVERSION@.patched/doc/interpreter/octave-config-@OCTVERSION@.1
2011-08-12 22:18:38.000000000 -0400
+@@ -18,23 +18,23 @@
+ .\"
+ .\" This page was contributed by Dirk Eddelbuettel <e...@debian.org>.
+ .\"
+-.TH OCTAVE-CONFIG 1 "19 February 2003" "GNU Octave"
++.TH OCTAVE-CONFIG-@OCTVERSION@ 1 "19 February 2003" "GNU Octave"
+ .SH NAME
+-octave-config - GNU Octave component and library information retrieval
++octave-config-@OCTVERSION@ - GNU Octave component and library information
retrieval
+ .SH SYNOPSIS
+-.B octave-config
++.B octave-config-@OCTVERSION@
+ .RI [ options ]
+ .SH DESCRIPTION
+ .PP
+-.B octave-config
++.B octave-config-@OCTVERSION@
+ is a tool to obtain directory information for
+ .I .oct
+ and
+ .I .m
+ files for
+-.BR octave (1).
++.BR octave-@OCTVERSION@ (1).
+ .SH OPTIONS
+-.B octave-config
++.B octave-config-@OCTVERSION@
+ accepts the following options:
+ .TP 8
+ .B \--m-site-dir
+@@ -72,7 +72,7 @@
+ .TP 8
+ .B \-h|-?|--help
+ Display a help page about
+-.B octave-config
++.B octave-config-@OCTVERSION@
+ .SH AUTHOR
+ John W. Eaton <j...@bevo.che.wisc.edu>
+
+diff -Naur octave-3.2.4/mkoctfile.in octave-3.2.4.patched/mkoctfile.in
+--- octave-3.2.4/mkoctfile.in 2009-05-25 02:04:59.000000000 -0400
++++ octave-3.2.4.patched/mkoctfile.in 2011-09-05 14:13:08.000000000 -0400
+@@ -71,10 +71,10 @@
+ : ${F77=%OCTAVE_CONF_F77%}
+ : ${FFLAGS=%OCTAVE_CONF_FFLAGS%}
+ : ${FPICFLAG=%OCTAVE_CONF_FPICFLAG%}
+-: ${CC=%OCTAVE_CONF_CC%}
++: ${CC=@WHICH_CC@}
+ : ${CFLAGS=%OCTAVE_CONF_CFLAGS%}
+ : ${CPICFLAG=%OCTAVE_CONF_CPICFLAG%}
+-: ${CXX=%OCTAVE_CONF_CXX%}
++: ${CXX=@WHICH_CXX@}
+ : ${CXXFLAGS=%OCTAVE_CONF_CXXFLAGS%}
+ : ${CXXPICFLAG=%OCTAVE_CONF_CXXPICFLAG%}
+ : ${XTRA_CFLAGS=%OCTAVE_CONF_XTRA_CFLAGS%}
+@@ -83,7 +83,7 @@
+ : ${DEPEND_FLAGS=%OCTAVE_CONF_DEPEND_FLAGS%}
+ : ${DEPEND_EXTRA_SED_PATTERN=%OCTAVE_CONF_DEPEND_EXTRA_SED_PATTERN%}
+
+-: ${DL_LD=%OCTAVE_CONF_DL_LD%}
++: ${DL_LD=@WHICH_CXX@}
+ : ${DL_LDFLAGS=%OCTAVE_CONF_MKOCTFILE_DL_LDFLAGS%}
+
+ : ${RLD_FLAG=%OCTAVE_CONF_RLD_FLAG%}
+@@ -96,7 +96,7 @@
+ : ${FFTW_LIBS=%OCTAVE_CONF_FFTW_LIBS%}
+ : ${LIBS=%OCTAVE_CONF_LIBS%}
+ : ${FLIBS=%OCTAVE_CONF_FLIBS%}
+-: ${LD_CXX=%OCTAVE_CONF_LD_CXX%}
++: ${LD_CXX=@WHICH_CXX@}
+ : ${LDFLAGS=%OCTAVE_CONF_LDFLAGS%}
+ : ${LD_STATIC_FLAG=%OCTAVE_CONF_LD_STATIC_FLAG%}
+ : ${LFLAGS=$DEFAULT_LFLAGS}
+
--- NEW FILE: octave324-docs.info ---
Package: octave324-docs
Version: 3.2.4
Revision: 1
Maintainer: Alexander Hansen <alexkhan...@users.sourceforge.net>
BuildDependsOnly: false
Source: mirror:gnu:octave/octave-%v.tar.gz
Source-MD5: 90c39fa9e241ad2e978bcee4682a2ba9
Recommends: octave324 | octave324-atlas
CompileScript: <<
#!/bin/sh -ev
echo "No compile needed"
<<
InstallScript: <<
#!/bin/sh -ev
echo "Only docs installed"
<<
DocFiles: doc/*
Description: Documentation for Octave, various formats
DescDetail: <<
This package contains all of the documentation (HTML, PDF, PS, DVI, ...)
from the octave-3.2.4 tarball.
<<
Homepage: http://www.octave.org/
License: GPL
--- NEW FILE: octave-3.2.4.info ---
Info2: <<
Package: octave%type_pkg[-atlas]
Type: -atlas (boolean), oct(3.2.4)
Version: 3.2.4
Revision: 10
Maintainer: Alexander Hansen <alexkhan...@users.sourceforge.net>
# disable atlas on 10.7 distro file until atlas is available
Source: mirror:gnu:%{Ni}/%{Ni}-%v.tar.gz
Source-MD5: 90c39fa9e241ad2e978bcee4682a2ba9
BuildDepends: <<
arpack (>= 96patched-5), glpk-dev, hdf5.7, readline5, libncurses5,
fftw3 (>= 3.1.1-7),
libcurl4, libftgl2, qhull6-dev, flag-sort,
pcre, gcc46-compiler, suitesparse-metis, fink (>= 0.30.0),
fink-package-precedence, sed,
graphicsmagick-dev, freetype219,
(%type_raw[-atlas] = atlas) atlas,
qrupdate%type_pkg[-atlas] (>=1.1.1-3)
<<
Depends: %{Ni}%type_pkg[oct]%type_pkg[-atlas] (=%v-%r)
BuildConflicts: coot-dev, broken-gcc, lammpi-dev, fort77, 4ti2-dev,
imagemagick10-dev
Suggests: %{Ni}%type_pkg[oct]-docs
GCC: 4.0
Conflicts: <<
(%type_raw[-atlas] = atlas) %{Ni}, (%type_raw[-atlas] != -atlas)
%{Ni}-atlas,
%{Ni}3.0.2 ( << 3.0.2-5), %{Ni}3.0.2-atlas ( << 3.0.2-5)
<<
Replaces: %{Ni}, %{Ni}-atlas, %{Ni}3.0.2 ( << 3.0.2-5), %{Ni}3.0.2-atlas ( <<
3.0.2-5)
UseMaxBuildJobs: false
PatchFile: %{ni}.patch
PatchFile-MD5: ce167f65e283dccf624e888c1a0a8725
PatchFile2: %{ni}-%v.patch
PatchFile2-MD5: 28dea047c7b3e51539a35b76249c8f67
PatchScript: <<
#!/bin/sh -ev
cp doc/interpreter/%{Ni}.1 doc/interpreter/%{Ni}-%v.1
cp doc/interpreter/%{Ni}-bug.1 doc/interpreter/%{Ni}-bug-%v.1
cp doc/interpreter/%{Ni}-config.1 doc/interpreter/%{Ni}-config-%v.1
cp doc/interpreter/mkoctfile.1 doc/interpreter/mkoctfile-%v.1
sed -e 's/@OCTVERSION@/%v/g' %{PatchFile} | patch -p1
# disable FLTK backend build since we have it already
patch -p1 < %{PatchFile2}
# add versioned manpages
sed -i -e 's|@FINKPREFIX@|%p|g' %{Ni}-forge* %{Ni}rc
doc/interpreter/*.1 mkoctfile.in
# fix lib name for qhull6
perl -pi -e 's|(qhull[/.])|lib\1|g ; s|lqhull|lqhull6|' configure
# wrong include dir for qhull6
for f in `grep -l -r "qhull_a\.h" src`
do sed -i.orig -e '/include/s|qhull/|lib&|' $f
done
# more patching by fangism
# silence some warnings
sed -i.orig -e '/ibasea/s|\*ibasea, ||' \
-e '/ibasea/s| ibasea =.*||' \
liboctave/oct-sort.cc
# should this accompany -D_THREAD_SAFE? in CFLAGS,CXXFLAGS
sed -i.orig -e '/#include.*Range\.h/i\
#define _REENTRANT' liboctave/lo-specfun.cc
# need size_t from <cstddef>
sed -i.orig -e '/#define octave_oct_alloc_h/a\
using std::size_t;' liboctave/oct-alloc.h
# needed by clang++, safe for g++: using-declaration as typedef
for f in liboctave/DiagArray2.h liboctave/intNDArray.h
do sed -i.orig -e '/using.*element_type;/s|using|& typename|' $f
done
# missing qualifier to dependent-name member-function
sed -i.orig -e '/truncate_int/s|\(return\) \(truncate_int\)|\1
octave_int_base<T>::\2|' liboctave/oct-inttypes.h
<<
SetCC: flag-sort -r gcc
SetCXX: flag-sort -r g++
# SetLDFLAGS: -Wl,-dead_strip_dylibs
SetLIBS: -lGraphicsMagick -lmetis
ConfigureParams: <<
--host=%m-apple-darwin --build=%m-apple-darwin \
--infodir='${prefix}/share/info' --mandir='${prefix}/share/man'
--libexecdir='${prefix}/lib' \
--enable-shared --enable-dl --disable-static --without-mpi --with-hdf5
--with-fftw \
--x-libraries=/usr/X11/lib --x-includes=/usr/X11/include
<<
CompileScript: <<
#!/bin/sh -ev
darwin_vers=`uname -r | cut -d. -f1`
export CFLAGS='-g -O3 -MD'
export CXXFLAGS='-g -O3 -MD'
if test $darwin_vers = 8
then export FFLAGS='-g -O3 -ff2c'
else export FFLAGS='-g -O3'
fi
export F77=gfortran-fsf-4.6
# auto-detect and use f90cache
if test -x %p/bin/f90cache
then
export F90CACHE_DIR=%p/var/f90cache
mkdir opt-bin
{ echo "#!/bin/sh" ; echo "exec $F77 \"\$@\"" ;} \
> opt-bin/gfortran-4.6
chmod +x opt-bin/gfortran-4.6
export PATH=%b/opt-bin:$PATH
export F77="f90cache gfortran-4.6"
fi
if [ "%type_pkg[-atlas]" == "" ]
then
a='--with-lapack=-Wl,-framework,Accelerate,-dylib_file,/System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libLAPACK.dylib:/System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libLAPACK.dylib
--with-blas=-Wl,-framework,Accelerate,-dylib_file,/System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib:/System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib'
else a='--with-lapack=%p/lib/liblapack.dylib
--with-blas=%p/lib/libf77blas.dylib'
fi
FLIBDIR="%p/lib/gcc4.6/lib"
./configure FLIBS="${FLIBDIR}/libgfortran.dylib" %c $a
make
fink-package-precedence --depfile-ext='\.d$'
--prohibit-bdep=%{Ni},%{Ni}-atlas,%{Ni}%type_raw[oct]-dev,%{Ni}%type_raw[oct]-atlas-dev,%{Ni}305-dev,%{Ni}305-atlas-dev,saclib-gcc46,saclib
src
<<
InfoTest: <<
TestScript: <<
# doesn't work on 10.6/i386
mv src/ov-struct.cc src/ov-struct.cc.testfails
# doesn't work anywhere
mv scripts/image/imread.m scripts/image/imread.m.testfails
make check || exit 2
mv scripts/image/imread.m.testfails scripts/image/imread.m
mv src/ov-struct.cc.testfails src/ov-struct.cc
<<
<<
InstallScript: <<
#!/bin/sh -ev
export MAKEFLAGS=-j1
make install DESTDIR=%d
# install Fink-specific octaverc which points at our oct-versioned
# package directory
cp %b/%{Ni}rc %i/share/%{Ni}/%v/m/startup
mkdir -p %i/var/%{Ni}/%v/
# install examples
mkdir -p %i/share/%{Ni}/%v/doc/examples
cp -R examples %i/share/%{Ni}/%v/doc/examples
pushd %i/bin
# clear out hardcoded Fink sed
for file in mkoctfile-%v %{Ni}-bug-%v %{Ni}-config-%v
do
perl -pi -e 's|%p/bin/sed|/usr/bin/sed|g' $file
done
popd
# remove autogenerated freedesktop.org desktop file
rm -f %i/share/applications/www.%{Ni}.org-%{Ni}.desktop
mkdir -p %i/share/%{Ni}/%v/scripts
# install the octave-forge helper scripts
cp %{Ni}-forge* %i/share/%{Ni}/%v/scripts
chmod a+x %i/share/%{Ni}/%v/scripts/*
<<
InfoDocs: %{Ni}.info
RuntimeVars: <<
GNUTERM: aqua
<<
DocFiles: BUGS ChangeLog README ROADMAP SENDING-PATCHES COPYING
SplitOff: <<
Package: octave%type_pkg[oct]%type_pkg[-atlas]-shlibs
Conflicts: <<
(%type_raw[-atlas] = atlas) %{Ni}%type_pkg[oct]-shlibs,
(%type_raw[-atlas] != atlas) %{Ni}%type_pkg[oct]-atlas-shlibs,
(%type_raw[-atlas] = atlas) %{Ni} (<< 3.0.5-5),
(%type_raw[-atlas] != atlas) %{Ni}-atlas (<< 3.0.5-5),
%{Ni}3.0.2 ( << 3.0.2-5), %{Ni}3.0.2-atlas ( << 3.0.2-5)
<<
Replaces: <<
(%type_raw[-atlas] = atlas) %{Ni}%type_pkg[oct]-shlibs,
(%type_raw[-atlas] != atlas) %{Ni}%type_pkg[oct]-atlas-shlibs,
%{Ni} (<< 3.0.5-5), %{Ni}-atlas (<< 3.0.5-5),
%{Ni}3.0.2 ( << 3.0.2-5), %{Ni}3.0.2-atlas ( << 3.0.2-5)
<<
Depends: <<
fftw3-shlibs, gcc46-shlibs, hdf5.7-shlibs, readline5-shlibs,
(%type_raw[-atlas] = -atlas) atlas-shlibs (>= 3.8.1-1),
(%type_raw[-atlas] = -atlas) qrupdate-atlas-shlibs (>=
1.1.1-3),
(%type_raw[-atlas] != -atlas) qrupdate-shlibs (>= 1.1.1-3)
<<
Files: <<
lib/%{Ni}-%v
<<
Shlibs: <<
%p/lib/%{Ni}-%v/libcruft.dylib 0.0.0 %n (>=3.2.4-1)
%p/lib/%{Ni}-%v/lib%{Ni}.dylib 0.0.0 %n (>=3.2.4-1)
%p/lib/%{Ni}-%v/liboctinterp.dylib 0.0.0 %n (>=3.2.4-1)
<<
DescDetail: <<
This package contains shared libraries which are used by the Octave
interpreter itself, as well as for packages that build against Octave,
such as the various octave-forge packages.
<<
DescUsage: <<
To use mkoctfile to build dynamically loadable modules, you will need
to install the hdf5-oldapi and fftw3 packages, as well as
%{Ni}%type_pkg[oct]%type_pkg[-atlas]-dev.
It cannot Depend on them since they are BuildDependsOnly.
Any package that either links to the libraries in
%{Ni}%type_pkg[-atlas]-shlibs or
installs an extension should Depend on
%{Ni}%type_pkg[oct]%type_pkg[-atlas]-shlibs and BuildDepend
on %{Ni}%type_pkg[oct]%type_pkg[-atlas]-dev. In addition, it will need
to BuildDepend on
hdf5-oldapi and fftw3.
<<
DocFiles: BUGS ChangeLog README ROADMAP SENDING-PATCHES COPYING
<<
SplitOff2: <<
Package: octave%type_pkg[oct]%type_pkg[-atlas]-dev
Depends: octave%type_pkg[oct]%type_pkg[-atlas]-shlibs (=%v-%r),
gcc46-compiler, (%type_raw[-atlas] = atlas) atlas (>= 3.8.1-1)
Conflicts: <<
(%type_raw[-atlas] = atlas) %{Ni}%type_pkg[oct]-dev,
(%type_raw[-atlas] != atlas) %{Ni}%type_pkg[oct]-atlas-dev,
(%type_raw[-atlas] = atlas) %{Ni} (<< 3.0.5-5),
(%type_raw[-atlas] != atlas) %{Ni}-atlas (<< 3.0.5-5),
%{Ni}3.0.2 ( << 3.0.2-5), %{Ni}3.0.2-atlas ( << 3.0.2-5),
%{Ni}305-dev, %{Ni}305-atlas-dev, %{Ni}342-dev,
%{Ni}342-atlas-dev
<<
Replaces: <<
(%type_raw[-atlas] = atlas) %{Ni}%type_pkg[oct]-dev,
(%type_raw[-atlas] != atlas) %{Ni}%type_pkg[oct]-atlas-dev,
%{Ni} (<< 3.0.5-5), %{Ni}-atlas (<< 3.0.5-5),
%{Ni}3.0.2 ( << 3.0.2-5), %{Ni}3.0.2-atlas ( << 3.0.2-5),
%{Ni}305-dev, %{Ni}305-atlas-dev, %{Ni}342-dev,
%{Ni}342-atlas-dev
<<
BuildDependsOnly: true
Files: <<
include/%{Ni}-%v
bin/mkoctfile*
bin/octave-config*
share/man/man1/mkoctfile.1
share/man/man1/octave-config.1
<<
PostInstScript: <<
finkpath=`fink dumpinfo -ePATH %N`
fink_cc=`export $finkpath; which gcc`
fink_cxx=`export $finkpath; which g++`
sed -i.bak -e "s|@WHICH_CC@|$fink_cc|g" \
-e "s|@WHICH_CXX@|$fink_cxx|g"
%p/bin/mkoctfile-%type_raw[oct]
<<
DescDetail: <<
This package contains files needed to build against Octave, including
headers and the mkoctfile executable.
Note: mkoctfile encodes the compiler wrappers that Fink uses.
Use "fink reinstall %n" if you update your OS in-place
and it will be updated for your new OS version.
<<
DescUsage: <<
To use mkoctfile to build dynamically loadable modules, you will need
to install the hdf5-oldapi and fftw3 packages, as well as
%{Ni}%type_pkg[oct]%type_pkg[-atlas]-dev.
It cannot Depend on them since they are BuildDependsOnly.
Any package that either links to the libraries in
%{Ni}%type_pkg[-atlas]-shlibs or
installs an extension should Depend on
%{Ni}%type_pkg[oct]%type_pkg[-atlas]-shlibs and BuildDepend
on %{Ni}%type_pkg[oct]%type_pkg[-atlas]-dev. In addition, it will need
to BuildDepend on
hdf5-oldapi and fftw3.
<<
DocFiles: BUGS ChangeLog README ROADMAP SENDING-PATCHES COPYING
<<
Splitoff3: <<
Package: octave%type_pkg[oct]%type_pkg[-atlas]
Depends: <<
%{Ni}%type_pkg[oct]%type_pkg[-atlas]-shlibs (=%v-%r),
arpack-shlibs(>= 96patched-5), fftw3-shlibs (>= 3.1.1-7), glpk-shlibs,
graphicsmagick-shlibs, libcurl4-shlibs,
%{Ni}%type_pkg[oct]%type_pkg[-atlas]-shlibs, pcre-shlibs,
qhull6-shlibs, (%type_raw[-atlas] = -atlas) atlas-shlibs (>= 3.8.1-1),
ncurses, gnuplot | gnuplot-nox | gnuplot-nogtk,
fltk-backend-aqua-oct%type_pkg[oct] | fltk-backend-x11-oct%type_pkg[oct]
<<
Conflicts: <<
(%type_raw[-atlas] = atlas) %{Ni}%type_pkg[oct],
(%type_raw[-atlas] != atlas) %{Ni}%type_pkg[oct]-atlas,
(%type_raw[-atlas] = atlas) %{Ni} (<< 3.0.5-5),
(%type_raw[-atlas] != atlas) %{Ni}-atlas (<< 3.0.5-5),
%{Ni}3.0.2 ( << 3.0.2-5), %{Ni}3.0.2-atlas ( << 3.0.2-5)
<<
Replaces: <<
(%type_raw[-atlas] = atlas) %{Ni}%type_pkg[oct]-dev,
(%type_raw[-atlas] != atlas) %{Ni}%type_pkg[oct]-atlas-dev,
%{Ni} (<< 3.0.5-5), %{Ni}-atlas (<< 3.0.5-5),
%{Ni}3.0.2 ( << 3.0.2-5), %{Ni}3.0.2-atlas ( << 3.0.2-5)
<<
Files: <<
share/%{Ni}/%v
lib/%{Ni}/%v
bin/%{Ni}-%v
bin/%{Ni}-bug-%v
var/%{Ni}/%v
<<
DescDetail: <<
The %{Ni}%type_pkg[oct]%type_pkg[-atlas] package contains versioned
executables, as well as all of the
core functionality of the Octave interpreter. Note that the GNU info
file,
which provides the core documentation, is installed as part of the %{Ni}
package.
Octave provides a convenient command line interface for solving linear
and
nonlinear problems numerically, and for performing other numerical
experiments using a language that is mostly compatible with Matlab.
It may also be used as a batch-oriented language.
Octave has extensive tools for solving common numerical linear algebra
problems, finding the roots of nonlinear equations, integrating ordinary
functions, manipulating polynomials, and integrating ordinary
differential
and differential-algebraic equations. It is easily extensible and
customizable via user-defined functions written in Octave's own
language,
or using dynamically loaded modules written in C++, C, Fortran,
or other languages.
<<
DescUsage: <<
By default the plotting output (via gnuplot) is directed to AquaTerm.
This can be overidden in your startup scripts, e.g.
export GNUTERM=x11
in bash
or
setenv GNUTERM x11
in tcsh.
Note: Fink's Octave implementation modifies one of the startup files,
%p/share/%{Ni}/%v/m/startup/octaverc,
to initialize octave sessions to know about Fink's octave-versioned
install location for octave-forge packages. If you use the '--norc'
or '-f' flags in your Octave script, these packages won't be visible.
You'll need torun the following command in your script:
pkg global_list %p/var/octave/%v/octave_packages
<<
DocFiles: BUGS ChangeLog README ROADMAP SENDING-PATCHES COPYING
<<
Description: MATLAB-like language for computations
DescDetail: <<
The %{Ni}%type_pkg[-atlas] package contains unversioned executables and an
unversioned directory tree.
Octave provides a convenient command line interface for solving linear and
nonlinear problems numerically, and for performing other numerical
experiments using a language that is mostly compatible with Matlab.
It may also be used as a batch-oriented language.
Octave has extensive tools for solving common numerical linear algebra
problems, finding the roots of nonlinear equations, integrating ordinary
functions, manipulating polynomials, and integrating ordinary differential
and differential-algebraic equations. It is easily extensible and
customizable via user-defined functions written in Octave's own language,
or using dynamically loaded modules written in C++, C, Fortran,
or other languages.
Note: mkoctfile encodes the compiler wrappers that Fink uses.
Use "fink reinstall %{Ni}%v%type_pkg[atlas]" if you update your OS in-place
and it will be updated for your new OS version.
<<
DescUsage: <<
To use mkoctfile to build dynamically loadable modules, you will need
to install the hdf5-oldapi and fftw3 packages, as well as
%{Ni}%type_pkg[oct]%type_pkg[-atlas]-dev.
It cannot Depend on them since they are BuildDependsOnly.
Any package that either links to the libraries in
%{Ni}%type_pkg[-atlas]-shlibs or installs an extension should Depend on
%{Ni}%type_pkg[oct]%type_pkg[-atlas]-shlibs and BuildDepend on
%{Ni}%type_pkg[oct]%type_pkg[-atlas]-dev. In addition, it will need to
BuildDepend on hdf5-oldapi and fftw3.
By default the plotting output (via gnuplot) is directed to AquaTerm.
This can be overidden in your startup scripts, e.g.
export GNUTERM=x11
in bash
or
setenv GNUTERM x11
in tcsh.
Note: Fink's Octave implementation modifies one of the startup files,
%p/share/%{Ni}/%v/m/startup/octaverc,
to initialize octave sessions to know about Fink's octave-versioned
install location for octave-forge packages. If you use the '--norc' or '-f'
flags in your Octave script, these packages won't be visible. You'll need to
run the following command in your script:
pkg global_list %p/var/octave/%v/octave_packages
<<
DescPort: <<
Thanks to Per Persson for most (if not all) of the work on the macos X port.
Cleanups from David Fang to get the package to build using clang.
<<
DescPackaging: <<
Not sane (and now not even compilable) to use private code
from glpk. Import the functions needed so can still use it
even when glpk stops exporting its internals. See:
http://octave.1599824.n4.nabble.com/GLPK-interface-was-Re-Multithreaded-Atlas-td1654632.html
Set the GNUTERM environment variable to AquaTerm because autodetection
of DISPLAY seems to cause options to be fed to our gnuplot that it doesn't
understand.
AquaTerm seems to be a sensible default, particularly since gnuplot-nox is also
a
legal dependency.
Create manpages for the versioned executables.
Remove a desktop file that gets generated only for users with GNOME/KDE
installed.
Patch mkoctfile.in so that it uses Fink's compiler wrappers
when building octave packages by hand. This is critical for 10.6/i386 users.
We have split the package up into runtime, development, and library packages,
to make upgrades easier for us and for users.
We generate common octave-forge bash and octave scripts,
based on the ones by Johnathan Stickel in the original octave-forge-foo
packages, in _this_ package, so that any required changes can be made in
a common location rather than spread out over many packages.
Unfortunately, Octave's 'pkg' tool doesn't seem to know how to deal with
variables, and the individual octave-forge packages have to make copies
of the octave scripts during their build process and edit them to use the
package's name.
We don't build the FLTK backend since we are allowing for Aqua and X11 variants
of that bundle in the fltk-backend-{aqua|x11}.
<<
Homepage: http://www.octave.org/
License: GPL
<<
--- NEW FILE: fltk-backend-oct-3.2.4.info ---
Info2: <<
Package: fltk-backend-%type_pkg[ui]-oct%type_pkg[oct]
Type: ui (x11 aqua), oct(3.2.4)
Version: 3.2.4
Revision: 2
Maintainer: Alexander Hansen <alexkhan...@users.sourceforge.net>
Description: Graphics backend for octave%type_pkg[oct]
DescDetail: <<
We build fltk-backend.oct separately to allow for variants that use Aqua and
X11. Install fltk-backend-aqua-oct%type_pkg[oct] if you want the Aqua
interface or fltk-backend-x11-oct%type_pkg[oct] if you want the X11 one.
<<
Source: mirror:gnu:octave/octave-%v.tar.gz
Source-MD5: 90c39fa9e241ad2e978bcee4682a2ba9
SourceDirectory: octave-%v
BuildDepends: <<
(%type_pkg[ui] = x11) fltk-x11,
(%type_pkg[ui] = x11) x11-dev,
(%type_pkg[ui] = aqua) fltk13-aqua,
arpack, glpk-dev, hdf5.7, readline5, libncurses5, fftw3 (>= 3.1.1-7),
libcurl4, libftgl2, qhull6-dev, qrupdate, flag-sort,
pcre, gcc46-compiler, suitesparse-metis, fink (>= 0.30.0), sed,
graphicsmagick-dev, freetype219, libftgl2
<<
Depends: <<
(%type_pkg[ui] = x11) fltk-x11-shlibs,
(%type_pkg[ui] = x11) x11,
(%type_pkg[ui] = aqua) fltk13-aqua-shlibs
<<
BuildConflicts: coot-dev, broken-gcc, lammpi-dev, fort77, 4ti2-dev,
imagemagick10-dev
GCC: 4.0
Conflicts: fltk-backend-aqua-oct%type_pkg[oct],
fltk-backend-x11-oct%type_pkg[oct]
Replaces: fltk-backend-aqua-oct%type_pkg[oct],
fltk-backend-x11-oct%type_pkg[oct]
UseMaxBuildJobs: false
PatchFile: fltk-backend.patch
PatchFile-MD5: 1df437597f67ce17b321534513e5946f
PatchScript: <<
#!/bin/sh -ev
sed -e 's/@OCTVERSION@/%v/g' %{PatchFile} | patch -p1
# fix lib name for qhull6
perl -pi -e 's|(qhull[/.])|lib\1|g ; s|lqhull|lqhull6|' configure
# wrong include dir for qhull6
for f in `grep -l -r "qhull_a\.h" src`
do sed -i.orig -e '/include/s|qhull/|lib&|' $f
done
# more patching by fangism
# silence some warnings
sed -i.orig -e '/ibasea/s|\*ibasea, ||' \
-e '/ibasea/s| ibasea =.*||' \
liboctave/oct-sort.cc
# should this accompany -D_THREAD_SAFE? in CFLAGS,CXXFLAGS
sed -i.orig '/#include.*Range\.h/i\
#define _REENTRANT' liboctave/lo-specfun.cc
# need size_t from <cstddef>
sed -i.orig -e '/#define octave_oct_alloc_h/a\
using std::size_t;' liboctave/oct-alloc.h
# needed by clang++, safe for g++: using-declaration as typedef
for f in liboctave/DiagArray2.h liboctave/intNDArray.h
do sed -i.orig -e '/using.*element_type;/s|using|& typename|' $f
done
# missing qualifier to dependent-name member-function
sed -i.orig -e '/truncate_int/s|\(return\) \(truncate_int\)|\1
octave_int_base<T>::\2|' liboctave/oct-inttypes.h
perl -pi -e 's/scripts doc/scripts/; s/INSTALL.OCTAVE//' Makefile
<<
SetCC: flag-sort -r gcc
SetCXX: flag-sort -r g++
# SetLDFLAGS: -Wl,-dead_strip_dylibs
SetLIBS: -lGraphicsMagick -lmetis
ConfigureParams: <<
F77=%p/bin/gfortran-fsf-4.6 --host=%m-apple-darwin
--build=%m-apple-darwin \
--infodir='${prefix}/share/info' --mandir='${prefix}/share/man'
--libexecdir='${prefix}/lib' \
--enable-shared --enable-dl --without-mpi --with-hdf5 --with-fftw \
(%type_pkg[ui] = x11 ) --with-x \
(%type_pkg[ui] = x11 ) --x-libraries=/usr/X11/lib \
(%type_pkg[ui] = x11 ) --x-includes=/usr/X11/include \
(%type_pkg[ui] = x11 ) --without-framework-carbon \
(%type_pkg[ui] = aqua ) --without-x \
(%type_pkg[ui] = aqua ) --with-framework-carbon \
--disable-static
<<
CompileScript: <<
#!/bin/sh -ev
export CFLAGS='-O3 -MD'
export CXXFLAGS='-O3 -MD'
export FFLAGS='-O3'
a='--with-lapack=-Wl,-framework,Accelerate,-dylib_file,/System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libLAPACK.dylib:/System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libLAPACK.dylib
--with-blas=-Wl,-framework,Accelerate,-dylib_file,/System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib:/System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib'
FLIBDIR="%p/lib/gcc4.6/lib"
./configure FLIBS="${FLIBDIR}/libgfortran.dylib" %c $a
#make
pushd libcruft
make all
popd
pushd liboctave
make all
popd
pushd src
make all
<<
InstallScript: <<
mkdir -p %i/lib/octave/%type_raw[oct]/oct/%m-apple-darwin
cp src/fltk_backend.oct %i/lib/octave/%type_raw[oct]/oct/%m-apple-darwin/
<<
DocFiles: COPYING
Homepage: http://www.octave.org/
License: GPL
DescPackaging: <<
Currently we build all of octave and then only install
fltk_backend.oct.
<<
<<
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