Update of /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci
In directory sc8-pr-cvs5.sourceforge.net:/tmp/cvs-serv32677
Modified Files:
ccp4.info
Log Message:
patch update, added DescPort, cleaned up info file
Index: ccp4.info
===================================================================
RCS file: /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci/ccp4.info,v
retrieving revision 1.16
retrieving revision 1.17
diff -u -d -r1.16 -r1.17
--- ccp4.info 22 Nov 2006 04:27:07 -0000 1.16
+++ ccp4.info 27 Nov 2006 22:38:57 -0000 1.17
@@ -1,6 +1,6 @@
Package: ccp4
Version: 6.0.2
-Revision: 1
+Revision: 2
GCC: 4
Source: ftp://ftp.ccp4.ac.uk/ccp4/%v/source/ccp4-%v-core-src.tar.gz
Source-MD5: a47ae8b8e6fa76eef7f17baa85e8dc16
@@ -11,315 +11,390 @@
Source3-MD5: 21568dd2475505929573a3fd452c538f
Source4:
http://chemistry.ucsc.edu/~wgscott/xtal/xtalfink/ccp4_i686-apple-darwin8.6.1_libtool.gz
Source4-MD5: e40104835406c75c8aee16471b2dd06e
-Depends: x11, tcltk, blt, gcc4-shlibs (>= 2:4.1.99-20060515), fftw-shlibs,
%N-shlibs (= %v-%r)
-BuildDepends: gcc4 (>= 2:4.1.99-20060515), f2c, fort77, tcltk-dev, fftw
-Replaces: mosflm (<= 6.2.3-2), mosflm-small (<= 6.2.3-2), refmac (<= 5.2),
ccp4-shlibs (<= 6.0.1-9999), ccp4 (<= 6.0.1-9999), ccp4-dev (<= 6.0.1-9999),
bundle-ccp4-intel, clipper-bin, ccp4-gfortran, ccp4-gfortran-dev,
bundle-ccp4-powerpc
-Conflicts: ccp4-shlibs (<= 6.0.1-9999) , ccp4 (<= 6.0.1-9999), ccp4-dev (<=
6.0.1-9999), bundle-ccp4-intel, bundle-ccp4-powerpc, ccp4-gfortran,
ccp4-gfortran-dev
+# The follwing are CCP4-issued version-specific patch files from the website at
+# http://www.ccp4.ac.uk/problems.php#ccp4-6.0.2
+Source5: ftp://ftp.ccp4.ac.uk/ccp4/%v/patches/topp.f-r1.16.2.5-r1.16.2.6.diff
+Source5-MD5: a23e9886620886a694295ac2e671156a
+DescPort: <<
+ CCP4 is designed to compile with gfortran on OS X >= 10.4 by default.
+ Jack Howarth has provided multiple improvements in the patch file to
+ address several bugs and to permit optimization with gfortran at -O3.
+
+ Users typically install all of the ccp4 files into /xtal/ccp4-%v or
+ into /usr/local/xtal/ccp4-%v. In the present case, these files are
+ installed into %p/share/xtal/ccp4-%v. The library files are installed
+ into the directory %p/lib/ccp4-%v and this directory is symbolically
+ linked to %p/share/xtal/ccp4-%v/lib which is the canonical location.
+ Dynamic libraries are provided in the ccp4-shlibs splitoff package, and
+ static libraries are provided in the ccp4-dev splitoff package. The
+ configure files are patched so that the full path to the dynamic
+ libraries is hard-coded, per fink policy. This obviates the need to
+ set the DYLD_LIBRARY_PATH environment variable, which should remain
+ unset. The appropriate shell startup files are automatically sourced
+ when %p/bin/init.(c)sh is invoked upon shell startup; there is no
+ need to do so manually. The actual files are located in $CCP4/include.
+
+ Although phaser is built, the cctbx files are not installed in $CLIB.
+ If needed, please install the cctbx fink package.
+
+ The ccp4i mail utility by default will only work on machines that run
+ a mail server. As a workaround, a public domain perl script called
+ osx_ccp4_mail is installed that glues the ccp4i mail button to the
+ Apple OS X Mail.app.
+
+ Further adaptations are commented in place in the patch, configure and
+ install scripts below. Relevant patches specific to this version that
+ are issued by CCP4 are now downloaded and applied individually, helping
+ to keep the ccp4.patch file from growing metastatically and also to
+ permit the user to verify that the latest patches have been applied.
+ These start with Source5 (above) and are applied individually at the
+ end of the PatchScript field.
+<<
+Depends: <<
+ x11,
+ tcltk,
+ blt,
+ gcc4-shlibs (>= 2:4.1.99-20060515),
+ fftw-shlibs, %N-shlibs (= %v-%r)
+<<
+BuildDepends: <<
+ gcc4 (>= 2:4.1.99-20060515),
+ f2c,
+ fort77,
+ tcltk-dev,
+ fftw
+<<
+Replaces: <<
+ mosflm (<= 6.2.3-2),
+ mosflm-small (<= 6.2.3-2),
+ refmac (<= 5.2),
+ ccp4-shlibs (<= 6.0.1-9999),
+ ccp4 (<= 6.0.1-9999),
+ ccp4-dev (<= 6.0.1-9999),
+ bundle-ccp4-intel,
+ clipper-bin,
+ ccp4-gfortran,
+ ccp4-gfortran-dev,
+ bundle-ccp4-powerpc
+<<
+Conflicts: <<
+ ccp4-shlibs (<= 6.0.1-9999) ,
+ ccp4 (<= 6.0.1-9999),
+ ccp4-dev (<= 6.0.1-9999),
+ bundle-ccp4-intel,
+ bundle-ccp4-powerpc,
+ ccp4-gfortran,
+ ccp4-gfortran-dev
+<<
NoSetCPPFLAGS: true
NoSetLDFLAGS: true
#
################################################################################
PatchScript: <<
-#!/bin/zsh -efv
-#
-umask 0022
-# This is temporary until they put the phaser tarball in the right directory.
-cp -r ../ccp4-6.0/lib/cctbx lib/cctbx
-cp -r ../ccp4-6.0/lib/src/* lib/src/.
-cp -r ../ccp4-6.0/src/phaser src/phaser
-#
-# Now do the patch
-sed 's|@PREFIX@|%p|g' <%a/%n.patch | patch -p1
-# setup script for tcsh, zsh and bash users
-export TEMPXTAL=$PWD:h
-#
-perl -pi.bak -e 's|/xtal|\$TEMPXTAL|g' include/ccp4.setup* # build prefix
(changed in install)
-perl -pi.bak -e 's|/prefix|%p|g' include/ccp4.setup* # location of
tcktk, blt
-perl -pi.bak -e 's|/usr/local/bin|%p/bin|g' include/ccp4.setup* # same
-perl -pi.bak -e 's|limit stacksize 65536|limit stacksize unlimited|g'
include/ccp4.setup* # same
-#
-perl -pi.bak -e 's|SW_PREFIX|%p|g' **/configure # location of
tcktk, blt
-cp include/ccp4.setup-dist include/ccp4.setup
-rm -f include/ccp4.setup-bash **/configure.bak include/ccp4.setup*.bak
-#
-# Set up XCCPJiffy wrapper scripts in $CCP4/etc
-# These are small wrapper scripts for xplot84driver and xloggraph generated by
the patch
- chmod a+x etc/x*
-# Fix the dylib install path in configure
-perl -pi.bak -e 's|\$rpath|%p/lib/ccp4-%v|g' **/configure
-
- # We need the mmdbold clipper libraries built for COOT:
-perl -pi.bak -e 's|enable_mmdbold=no|enable_mmdbold=yes|g'
lib/clipper/configure*
+ #!/bin/zsh -efv
+ #
+ umask 0022
+ # This is temporary until they put the phaser tarball in the right
directory.
+ cp -r ../ccp4-6.0/lib/cctbx lib/cctbx
+ cp -r ../ccp4-6.0/lib/src/* lib/src/.
+ cp -r ../ccp4-6.0/src/phaser src/phaser
+ #
+ # Now apply the primary patch
+ sed 's|@PREFIX@|%p|g' <%a/%n.patch | patch -p1
+ # setup script for tcsh, zsh and bash users
+ export TEMPXTAL=$PWD:h
+ #
+ perl -pi.bak -e 's|/xtal|\$TEMPXTAL|g' include/ccp4.setup* # build
prefix (changed in install)
+ perl -pi.bak -e 's|/prefix|%p|g' include/ccp4.setup* #
location of tcktk, blt
+ perl -pi.bak -e 's|/usr/local/bin|%p/bin|g' include/ccp4.setup* #
same
+ perl -pi.bak -e 's|limit stacksize 65536|limit stacksize unlimited|g'
include/ccp4.setup* # same
+ #
+ perl -pi.bak -e 's|SW_PREFIX|%p|g' **/configure # location
of tcktk, blt
+ cp include/ccp4.setup-dist include/ccp4.setup
+ rm -f include/ccp4.setup-bash **/configure.bak include/ccp4.setup*.bak
+ #
+ # Set up XCCPJiffy wrapper scripts in $CCP4/etc
+ # These are small wrapper scripts for xplot84driver and xloggraph
generated by the patch
+ chmod a+x etc/x*
+ # Fix the dylib install path in configure
+ perl -pi.bak -e 's|\$rpath|%p/lib/ccp4-%v|g' **/configure
+ # We need the mmdbold clipper libraries built for COOT:
+ perl -pi.bak -e 's|enable_mmdbold=no|enable_mmdbold=yes|g'
lib/clipper/configure*
+ #
+ # Now apply all patches issued by CCP4 subsequent to the %v release:
+ /usr/bin/patch src/topp_/topp.f
../topp.f-r1.16.2.5-r1.16.2.6.diff
+ #
<<
################################################################################
CompileScript: <<
-#!/bin/zsh -efv
-umask 0022
+ #!/bin/zsh -efv
+ umask 0022
+
+ # These are required for the build environment
+ export TEMPXTAL=$PWD:h
+ source include/ccp4.setup-zsh
+ export DYLD_LIBRARY_PATH=$CLIB
+ export rpath=%p/lib/ccp4-%v
+ export RPATH=%p/lib/ccp4-%v
- # These are required for the build environment
-export TEMPXTAL=$PWD:h
-source include/ccp4.setup-zsh
-export DYLD_LIBRARY_PATH=$CLIB
-export rpath=%p/lib/ccp4-%v
-export RPATH=%p/lib/ccp4-%v
+ # The cctbx sub-package requires us to use the system's own Python
+ export
PATH=/System/Library/Frameworks/Python.framework/Versions/Current/bin:$PATH
+ export
PYTHONHOME="/System/Library/Frameworks/Python.framework/Versions/Current"
+ export
PYTHONPATH="/System/Library/Frameworks/Python.framework/Versions/Current/lib/python2.3"
- # The cctbx sub-package requires us to use the system's own Python
-export
PATH=/System/Library/Frameworks/Python.framework/Versions/Current/bin:$PATH
-export
PYTHONHOME="/System/Library/Frameworks/Python.framework/Versions/Current"
-export
PYTHONPATH="/System/Library/Frameworks/Python.framework/Versions/Current/lib/python2.3"
+ # gfortran is actually used by default, but to ensure the right thing
happens, specify it.
+ FC="%p/lib/gcc4/bin/gfortran" F_LIBS="-L%p/lib/gcc4/lib" ./configure
--with-shared-libs --with-fftw=%p --with-x Darwin
- # gfortran is actually used by default, but to ensure the right thing
happens, specify it.
-FC="%p/lib/gcc4/bin/gfortran" F_LIBS="-L%p/lib/gcc4/lib" ./configure
--with-shared-libs --with-fftw=%p --with-x Darwin
+ # fix some post-configure bugs by getting rid of -lg2c
+ perl -pi.bak -e 's|-lg2c||g' x-windows/**/*akefile*
-# fix some post-configure bugs by getting rid of -lg2c
-perl -pi.bak -e 's|-lg2c||g' x-windows/**/*akefile*
+ if [[ $(uname -p) != powerpc ]];then
+ perl -pi.bak -e 's|%p/lib/gcc4/bin/||g' lib/clipper/**/Makefile*
+ # Replace the ccp4 libtool file with one that works and compiles
cpirate:
+ cp ../ccp4_i686-apple-darwin8.6.1_libtool.gz
lib/clipper/libtool.gz
+ mv -f lib/clipper/libtool lib/clipper/libtool-dist
+ gunzip lib/clipper/libtool.gz
+ chmod a+x lib/clipper/libtool
+ fi
-if [[ $(uname -p) != powerpc ]];then
- perl -pi.bak -e 's|%p/lib/gcc4/bin/||g' lib/clipper/**/Makefile*
- # Replace the ccp4 libtool file with one that works and compiles cpirate:
- cp ../ccp4_i686-apple-darwin8.6.1_libtool.gz lib/clipper/libtool.gz
- mv -f lib/clipper/libtool lib/clipper/libtool-dist
- gunzip lib/clipper/libtool.gz
- chmod a+x lib/clipper/libtool
-fi
+ ( cd x-windows/XCCPJIFFY; perl -pi.bak -e 's|-lgfortran|-lgfortran
-L%p/lib/gcc4/lib |g' *akefile* )
-( cd x-windows/XCCPJIFFY; perl -pi.bak -e 's|-lgfortran|-lgfortran
-L%p/lib/gcc4/lib |g' *akefile* )
-#################
-make
-make install
-#################
+ #################
+ make
+ make install
+ #################
-# xloggraph will fail, but we will link it with fort77 below
-#
-# Make wrappers for xplot84driver and xloggraph, so rename the executables
-cd x-windows/XCCPJIFFY
-cp xplot84driver $CBIN/xplot84driver.exe
-rm -f $CBIN/xplot84driver
-#
-# Manually link xloggraph with fort77 (fails in make)
-echo ""
-echo "**********************************************************************"
-echo "Re-linking xloggraph with fort77. Ignore previous error messages."
-echo "**********************************************************************"
-echo ""
-#
- perl -pi.bak -e 's|FC = g77 -fno-second-underscore||g' Makefile
- make -i xloggraph 2>/dev/null
- fort77 -o xloggraph msg_box.o ZDr2d.o EditString.o hardcopy_ctrl.o
xloggraph.o log_file.o tom_fortran_interface.o bits_and_pieces.o graphics.o -g
-Os -I/usr/include/X11R6 -L/usr/X11R6/lib -lXaw -lXmu -lXt -lSM -lICE -lXpm
-lXext -lX11 -lm -lgfortran -L%p/lib/gcc4/lib
+ # xloggraph will fail, but we will link it with fort77 below
+ #
+ # Make wrappers for xplot84driver and xloggraph, so rename the
executables
+ cd x-windows/XCCPJIFFY
+ cp xplot84driver $CBIN/xplot84driver.exe
+ rm -f $CBIN/xplot84driver
+ #
+ # Manually link xloggraph with fort77 (fails in make)
+ echo ""
+ echo
"**********************************************************************"
+ echo "Re-linking xloggraph with fort77. Ignore previous error
messages."
+ echo
"**********************************************************************"
+ echo ""
+ #
+ perl -pi.bak -e 's|FC = g77 -fno-second-underscore||g' Makefile
+ make -i xloggraph 2>/dev/null
+ fort77 -o xloggraph msg_box.o ZDr2d.o EditString.o hardcopy_ctrl.o
xloggraph.o log_file.o tom_fortran_interface.o bits_and_pieces.o graphics.o -g
-Os -I/usr/include/X11R6 -L/usr/X11R6/lib -lXaw -lXmu -lXt -lSM -lICE -lXpm
-lXext -lX11 -lm -lgfortran -L%p/lib/gcc4/lib
-#
-sleep 10
-#
-cp xloggraph $CBIN/xloggraph.exe
-if [[ -x $CBIN/xloggraph ]];then
- rm -f $CBIN/xloggraph
-fi
-cd ../..
-#
-# Cleanup:
-#
-# make realclean
-/bin/rm -f **/*.o
-/bin/rm -f **/*.bak
-/bin/rm -Rf src
-/bin/rm -Rf x-windows/libjwc/libjwc_c
-/bin/rm -Rf x-windows/libjwc/libjwc_f
-/bin/rm -Rf x-windows/xdl_view/src
- # remove redundant library junk
-/bin/rm -Rf lib/cctbx
-/bin/rm -Rf lib/**/.libs
-/bin/rm -f lib/ccif/libccif.dylib
-/bin/rm -f lib/src/libccp4c.dylib
-/bin/rm -f lib/src/libmmdb.dylib
-#/bin/rm -R unsupported
-/bin/rm -R testcomp*
-/bin/rm -R BINARY*
-cd $CLIB
-/bin/rm -f **/*.c
-/bin/rm -f **/*.f
-/bin/rm -f **/*.cpp
-echo "Compile Phase Completed!"
-echo "There are $(command ls -1 $CBIN | wc -l) programs in $CBIN; "
-echo "there should be 200"
+ #
+ sleep 10
+ #
+ cp xloggraph $CBIN/xloggraph.exe
+ if [[ -x $CBIN/xloggraph ]];then
+ rm -f $CBIN/xloggraph
+ fi
+ cd ../..
+ #
+ # Cleanup:
+ #
+ # make realclean
+ /bin/rm -f **/*.o
+ /bin/rm -f **/*.bak
+ /bin/rm -Rf src
+ /bin/rm -Rf x-windows/libjwc/libjwc_c
+ /bin/rm -Rf x-windows/libjwc/libjwc_f
+ /bin/rm -Rf x-windows/xdl_view/src
+ # remove redundant library junk
+ /bin/rm -Rf lib/cctbx
+ /bin/rm -Rf lib/**/.libs
+ /bin/rm -f lib/ccif/libccif.dylib
+ /bin/rm -f lib/src/libccp4c.dylib
+ /bin/rm -f lib/src/libmmdb.dylib
+ #/bin/rm -R unsupported
+ /bin/rm -R testcomp*
+ /bin/rm -R BINARY*
+ cd $CLIB
+ /bin/rm -f **/*.c
+ /bin/rm -f **/*.f
+ /bin/rm -f **/*.cpp
+ echo "Compile Phase Completed!"
+ echo "There are $(command ls -1 $CBIN | wc -l) programs in $CBIN; "
+ echo "there should be 200"
<<
################################################################################
InstallScript: <<
-#!/bin/zsh -efv
-
-umask 0022
-export TEMPXTAL=$PWD:h
-source include/ccp4.setup-zsh
-export DYLD_LIBRARY_PATH=$CLIB
-ORIGDIR=$(dirname $PWD)
-# Change environment scripts to match final installation
-perl -pi -e 's|\$TEMPXTAL|%p/share/xtal|g' include/ccp4.setup* # install
prefix
-#
-#
- cp ../XCCPJiffy-custom.gz XCCPJiffy.gz ; gunzip XCCPJiffy.gz; chmod a+x
XCCPJiffy
- perl -pi -e 's|5.0.1|%v|g' XCCPJiffy
- mv -f XCCPJiffy lib/X11/app-defaults/XCCPJiffy
-#
- perl -pi.bak -e 's|/src/fink.build/ccp4-%v-%r|/share/xtal|g'
bin/clipper-config
- rm -f bin/clipper-config.bak
- perl -pi.bak -e 's|lclipper |lclipper-core |g' bin/clipper-config
- rm -f bin/clipper-config.bak
- perl -pi.bak -e 's|lib/lib -lrfftw -lfftw |lib/ccp4-%v -lsrfftw -lsfftw |g'
bin/clipper-config
- rm -f bin/clipper-config.bak
-#
-# Fix path in libfoo.la libtool files:
-#
- perl -pi.bak -e 's|/src/fink.build/ccp4-%v-%r/ccp4-%v/lib|/lib/ccp4-%v|g'
lib/**/*.la
- rm -f lib/**/*.la.bak
-#
-# Now install:
-#
- mkdir -p %i/lib
- cp -R lib %i/lib/ccp4-%v
- mkdir -p %i/bin
-#
- mkdir -p %i/share/xtal/ccp4-%v/help
- mkdir -p %i/share/man/man1
-# set up man pages in a fink-compliant manner
- cd $PWD/doc
- mv rasmol.doc eightbit_rasmol.doc
- foreach docfilepage ( *.doc )
- cp ${docfilepage} %i/share/man/man1/${docfilepage:r}.1
- cp ${docfilepage} %i/share/xtal/ccp4-%v/help/${docfilepage:r}
-end
-# back to build directory
- cd ..
-#
-/bin/rm -rf lib
-#/bin/mv lib lib-save
+ #!/bin/zsh -efv
- cp -R * %i/share/xtal/ccp4-%v/.
- ln -s %p/lib/ccp4-%v %i/share/xtal/ccp4-%v/lib
-#
-# making scripts for %p/etc/profile.d
- mkdir -p %i/etc/profile.d
-#
- echo "source %p/share/xtal/ccp4-%v/include/ccp4.setup" >
%i/etc/profile.d/ccp4.csh
- echo "setenv CLIB %p/lib/ccp4-%v " >>
%i/etc/profile.d/ccp4.csh
-#
+ umask 0022
+ export TEMPXTAL=$PWD:h
+ source include/ccp4.setup-zsh
+ export DYLD_LIBRARY_PATH=$CLIB
+ ORIGDIR=$(dirname $PWD)
+ # Change environment scripts to match final installation
+ perl -pi -e 's|\$TEMPXTAL|%p/share/xtal|g' include/ccp4.setup* #
install prefix
+ #
+ #
+ cp ../XCCPJiffy-custom.gz XCCPJiffy.gz ; gunzip XCCPJiffy.gz; chmod
a+x XCCPJiffy
+ perl -pi -e 's|5.0.1|%v|g' XCCPJiffy
+ mv -f XCCPJiffy lib/X11/app-defaults/XCCPJiffy
+ #
+ perl -pi.bak -e 's|/src/fink.build/ccp4-%v-%r|/share/xtal|g'
bin/clipper-config
+ rm -f bin/clipper-config.bak
+ perl -pi.bak -e 's|lclipper |lclipper-core |g' bin/clipper-config
+ rm -f bin/clipper-config.bak
+ perl -pi.bak -e 's|lib/lib -lrfftw -lfftw |lib/ccp4-%v -lsrfftw
-lsfftw |g' bin/clipper-config
+ rm -f bin/clipper-config.bak
+ #
+ # Fix path in libfoo.la libtool files:
+ #
+ perl -pi.bak -e
's|/src/fink.build/ccp4-%v-%r/ccp4-%v/lib|/lib/ccp4-%v|g' lib/**/*.la
+ rm -f lib/**/*.la.bak
+ #
+ # Now install:
+ #
+ mkdir -p %i/lib
+ cp -R lib %i/lib/ccp4-%v
+ mkdir -p %i/bin
+ #
+ mkdir -p %i/share/xtal/ccp4-%v/help
+ mkdir -p %i/share/man/man1
+ # set up man pages in a fink-compliant manner
+ cd $PWD/doc
+ mv rasmol.doc eightbit_rasmol.doc
+ foreach docfilepage ( *.doc )
+ cp ${docfilepage} %i/share/man/man1/${docfilepage:r}.1
+ cp ${docfilepage} %i/share/xtal/ccp4-%v/help/${docfilepage:r}
+ end
+ # back to build directory
+ cd ..
+ #
+ /bin/rm -rf lib
+ cp -R * %i/share/xtal/ccp4-%v/.
+ ln -s %p/lib/ccp4-%v %i/share/xtal/ccp4-%v/lib
+ #
+ # making scripts for %p/etc/profile.d
+ mkdir -p %i/etc/profile.d
+ #
+ echo "source %p/share/xtal/ccp4-%v/include/ccp4.setup"
> %i/etc/profile.d/ccp4.csh
+ echo "setenv CLIB %p/lib/ccp4-%v "
>> %i/etc/profile.d/ccp4.csh
+ #
-echo "if [ -z \$ZSH_NAME ];then " >
%i/etc/profile.d/ccp4.sh
-echo " source %p/share/xtal/ccp4-%v/include/ccp4.setup-sh " >>
%i/etc/profile.d/ccp4.sh
-echo "else " >>
%i/etc/profile.d/ccp4.sh
-echo " source %p/share/xtal/ccp4-%v/include/ccp4.setup-zsh" >>
%i/etc/profile.d/ccp4.sh
-echo "fi " >>
%i/etc/profile.d/ccp4.sh
-echo "export CLIB=%p/lib/ccp4-%v " >>
%i/etc/profile.d/ccp4.sh
-#
- chmod a+x %i/etc/profile.d/ccp4.*
-#
- chmod a+x %i/share/xtal/ccp4-%v/ccp4i/etc/osx_ccp4_mail
-#
-# chmod a+x %i/share/xtal/ccp4-%v/etc/ccp4help
-#
- ranlib %i/lib/ccp4-%v/*.a
- ranlib %i/lib/ccp4-%v/**/*.a
-#
+ echo "if [ -z \$ZSH_NAME ];then "
> %i/etc/profile.d/ccp4.sh
+ echo " source %p/share/xtal/ccp4-%v/include/ccp4.setup-sh "
>> %i/etc/profile.d/ccp4.sh
+ echo "else "
>> %i/etc/profile.d/ccp4.sh
+ echo " source %p/share/xtal/ccp4-%v/include/ccp4.setup-zsh"
>> %i/etc/profile.d/ccp4.sh
+ echo "fi "
>> %i/etc/profile.d/ccp4.sh
+ echo "export CLIB=%p/lib/ccp4-%v "
>> %i/etc/profile.d/ccp4.sh
+ #
+ chmod a+x %i/etc/profile.d/ccp4.*
+ #
+ chmod a+x %i/share/xtal/ccp4-%v/ccp4i/etc/osx_ccp4_mail
+ #
+ # chmod a+x %i/share/xtal/ccp4-%v/etc/ccp4help
+ #
+ ranlib %i/lib/ccp4-%v/*.a
+ ranlib %i/lib/ccp4-%v/**/*.a
+ #
<<
################################################################################
PostInstScript: <<
-# Make the user read the license conditions
-more %p/share/xtal/ccp4-%v/conditions.txt
+ # Make the user read the license conditions
+ more %p/share/xtal/ccp4-%v/conditions.txt
<<
################################################################################
################################################################################
SplitOff: <<
-Package: %N-shlibs
-Description: CCP4 dynamic libraries
-Files:<<
-lib/ccp4-%v/*.dylib
-<<
-Shlibs: <<
-%p/lib/ccp4-%v/libccif.dylib
0.0.0 %n (>= 6.0.2-1)
-%p/lib/ccp4-%v/libccp4c.dylib
0.0.0 %n (>= 6.0.2-1)
-%p/lib/ccp4-%v/libclipper-ccp4.0.0.0.dylib 1.0.0
%n (>= 6.0.2-1)
-%p/lib/ccp4-%v/libclipper-ccp4.0.dylib 1.0.0
%n (>= 6.0.2-1)
-%p/lib/ccp4-%v/libclipper-ccp4.dylib 1.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libclipper-cif.0.0.0.dylib 1.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libclipper-cif.0.dylib 1.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libclipper-cif.dylib 1.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libclipper-cns.0.0.0.dylib 1.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libclipper-cns.0.dylib 1.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libclipper-cns.dylib 1.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libclipper-contrib.0.0.0.dylib 1.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libclipper-contrib.0.dylib 1.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libclipper-contrib.dylib 1.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libclipper-core.0.0.0.dylib 1.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libclipper-core.0.dylib 1.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libclipper-core.dylib 1.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libclipper-minimol.0.0.0.dylib 1.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libclipper-minimol.0.dylib 1.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libclipper-minimol.dylib 1.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libclipper-mmdb.0.0.0.dylib 1.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libclipper-mmdb.0.dylib 1.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libclipper-mmdb.dylib 1.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libclipper-mmdbold.0.0.0.dylib 1.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libclipper-mmdbold.0.dylib 1.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libclipper-mmdbold.dylib 1.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libclipper-phs.0.0.0.dylib 1.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libclipper-phs.0.dylib 1.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libclipper-phs.dylib 1.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libjwc_c.0.1.1.dylib 2.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libjwc_c.0.dylib 2.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libjwc_c.dylib 2.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libmmdb.dylib 0.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libssm.0.0.0.dylib 1.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libssm.0.dylib 1.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libssm.dylib 1.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libxdl_view.2.0.0.dylib 3.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libxdl_view.2.dylib 3.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libxdl_view.dylib 1.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libxdl_viewextra.0.0.0.dylib 1.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libxdl_viewextra.0.dylib 1.0.0 %n (>=
6.0.2-1)
-%p/lib/ccp4-%v/libxdl_viewextra.dylib 1.0.0 %n (>=
6.0.2-1)
-<<
-DocFiles: CHANGES COPYING INSTALL INSTALL.html INSTALL.ps README PROBLEMS
academic_software_licence.pdf
+ Package: %N-shlibs
+ Description: CCP4 dynamic libraries
+ Files:<<
+ lib/ccp4-%v/*.dylib
+ <<
+ Shlibs: <<
+ %p/lib/ccp4-%v/libccif.dylib
0.0.0 %n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libccp4c.dylib
0.0.0 %n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libclipper-ccp4.0.0.0.dylib
1.0.0 %n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libclipper-ccp4.0.dylib
1.0.0 %n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libclipper-ccp4.dylib 1.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libclipper-cif.0.0.0.dylib 1.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libclipper-cif.0.dylib 1.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libclipper-cif.dylib 1.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libclipper-cns.0.0.0.dylib 1.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libclipper-cns.0.dylib 1.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libclipper-cns.dylib 1.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libclipper-contrib.0.0.0.dylib 1.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libclipper-contrib.0.dylib 1.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libclipper-contrib.dylib 1.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libclipper-core.0.0.0.dylib 1.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libclipper-core.0.dylib 1.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libclipper-core.dylib 1.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libclipper-minimol.0.0.0.dylib 1.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libclipper-minimol.0.dylib 1.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libclipper-minimol.dylib 1.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libclipper-mmdb.0.0.0.dylib 1.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libclipper-mmdb.0.dylib 1.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libclipper-mmdb.dylib 1.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libclipper-mmdbold.0.0.0.dylib 1.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libclipper-mmdbold.0.dylib 1.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libclipper-mmdbold.dylib 1.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libclipper-phs.0.0.0.dylib 1.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libclipper-phs.0.dylib 1.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libclipper-phs.dylib 1.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libjwc_c.0.1.1.dylib 2.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libjwc_c.0.dylib 2.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libjwc_c.dylib 2.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libmmdb.dylib 0.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libssm.0.0.0.dylib 1.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libssm.0.dylib 1.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libssm.dylib 1.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libxdl_view.2.0.0.dylib 3.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libxdl_view.2.dylib 3.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libxdl_view.dylib 1.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libxdl_viewextra.0.0.0.dylib 1.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libxdl_viewextra.0.dylib 1.0.0
%n (>= 6.0.2-1)
+ %p/lib/ccp4-%v/libxdl_viewextra.dylib 1.0.0
%n (>= 6.0.2-1)
+ <<
+ DocFiles: CHANGES COPYING INSTALL INSTALL.html INSTALL.ps README
PROBLEMS academic_software_licence.pdf
<<
################################################################################
################################################################################
SplitOff2: <<
-Package: %N-dev
-BuildDependsOnly: true
-Description: CCP4 static libraries and libtool files
-Files:<<
-lib/ccp4-%v/*.a
-lib/ccp4-%v/*.la
-<<
-DocFiles: CHANGES COPYING INSTALL INSTALL.html INSTALL.ps README PROBLEMS
academic_software_licence.pdf
+ Package: %N-dev
+ BuildDependsOnly: true
+ Description: CCP4 static libraries and libtool files
+ Files:<<
+ lib/ccp4-%v/*.a
+ lib/ccp4-%v/*.la
+ <<
+ DocFiles: CHANGES COPYING INSTALL INSTALL.html INSTALL.ps README
PROBLEMS academic_software_licence.pdf
<<
-
-
################################################################################
Description: Macromolecular crystallography package
DescDetail: <<
-These are the ccp4 programs compiled with gfortran instead of g77.
-
-The (currently default) g77 version does not work on intel. The hope
-is that this will. (With gfortran-4.2, everything compiles.) Thanks
-to Jack Howarth for many helpful improvements.
+ These are the ccp4 programs compiled with gfortran instead of g77.
-CCP4 macromolecular crystallography suite has approximately
-200 programs and utilities. This version included Clipper
-libraries, and ccif and phaser. If you need cctbx, please
-install the cctbx fink package separately.
+ The (currently default) g77 version does not work on intel. The hope
+ is that this will. (With gfortran-4.2, everything compiles.) Thanks
+ to Jack Howarth for many helpful improvements.
-Type "ccp4help" for a summary listing of all ccp4 programs.
-Type "ccp4help foo" for a detailed description of program "foo."
+ CCP4 macromolecular crystallography suite has approximately
+ 200 programs and utilities. This version included Clipper
+ libraries, and ccif and phaser. If you need cctbx, please
+ install the cctbx fink package separately.
-Invoke optional ccp4i gui for the first run using: sudo ccp4i
-Thereafter, invoke without sudo.
+ Type "ccp4help" for a summary listing of all ccp4 programs.
+ Type "ccp4help foo" for a detailed description of program "foo."
-This version compiles with the Apple Lapack/Blas framework
-License agreement is part of configure file -- print out form and mail in,
-additional comments at http://xanana.ucsc.edu/xtal/ccp4.html
-CCP4 files will be installed under /sw/share/xtal/ccp4-6.0.2
-This revision includes all available CCP4 patches as of Nov 21, 2006.
-and new bash and zsh command completions specific to ccp4.
+ Invoke optional ccp4i gui for the first run using: sudo ccp4i
+ Thereafter, invoke without sudo.
+
+ This version compiles with the Apple Lapack/Blas framework
+ License agreement is part of configure file -- print out form and mail
in,
+ additional comments at http://xanana.ucsc.edu/xtal/ccp4.html
+ CCP4 files will be installed under /sw/share/xtal/ccp4-6.0.2
+ This revision includes all available CCP4 patches as of Nov 21, 2006.
+ and new bash and zsh command completions specific to ccp4.
+<<
+DocFiles: <<
+ README CHANGES COPYING PROBLEMS INSTALL INSTALL.html INSTALL.ps
+ ccp4i_installation.html academic_software_licence.pdf
+ academic_software_licence.ps.gz academic_software_licence.rtf
<<
-DocFiles: README CHANGES COPYING PROBLEMS INSTALL INSTALL.html INSTALL.ps
ccp4i_installation.html academic_software_licence.pdf
academic_software_licence.ps.gz academic_software_licence.rtf
Homepage: http://www.ccp4.ac.uk
License: Commercial
Maintainer: W. G. Scott <[EMAIL PROTECTED]>
-------------------------------------------------------------------------
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